Optimize test suite with testing.Short() guards

- Add Short() guards to slow CLI tests (2-4s each)
- Add Short() guards to slow API/integration tests (3-11s)
- Add Short() guard to hanging daemon discovery test (29s timeout)
- Short test suite now runs in ~6s (down from 5+ minutes)

Run 'go test -short ./...' for fast iteration
Run 'go test ./...' for full coverage

Closes: bd-iov0

cmd/bd/cli_fast_test.go

@@ -22,6 +22,9 @@ func setupCLITestDB(t *testing.T) string {
 }
 
 func TestCLI_Ready(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	runBD(t, tmpDir, "create", "Ready issue", "-p", "1")
@@ -32,6 +35,9 @@ func TestCLI_Ready(t *testing.T) {
 }
 
 func TestCLI_Create(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	out := runBD(t, tmpDir, "create", "Test issue", "-p", "1", "--json")
@@ -46,6 +52,9 @@ func TestCLI_Create(t *testing.T) {
 }
 
 func TestCLI_List(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	runBD(t, tmpDir, "create", "First", "-p", "1")
@@ -62,6 +71,9 @@ func TestCLI_List(t *testing.T) {
 }
 
 func TestCLI_Update(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	out := runBD(t, tmpDir, "create", "Issue to update", "-p", "1", "--json")
@@ -81,6 +93,9 @@ func TestCLI_Update(t *testing.T) {
 }
 
 func TestCLI_Close(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	out := runBD(t, tmpDir, "create", "Issue to close", "-p", "1", "--json")
@@ -100,6 +115,9 @@ func TestCLI_Close(t *testing.T) {
 }
 
 func TestCLI_DepAdd(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	
@@ -120,6 +138,9 @@ func TestCLI_DepAdd(t *testing.T) {
 }
 
 func TestCLI_DepRemove(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	
@@ -141,6 +162,9 @@ func TestCLI_DepRemove(t *testing.T) {
 }
 
 func TestCLI_DepTree(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	
@@ -162,6 +186,9 @@ func TestCLI_DepTree(t *testing.T) {
 }
 
 func TestCLI_Blocked(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	
@@ -183,6 +210,9 @@ func TestCLI_Blocked(t *testing.T) {
 }
 
 func TestCLI_Stats(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	runBD(t, tmpDir, "create", "Issue 1", "-p", "1")
@@ -195,6 +225,9 @@ func TestCLI_Stats(t *testing.T) {
 }
 
 func TestCLI_Show(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	out := runBD(t, tmpDir, "create", "Show test", "-p", "1", "--json")
@@ -210,6 +243,9 @@ func TestCLI_Show(t *testing.T) {
 }
 
 func TestCLI_Export(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	runBD(t, tmpDir, "create", "Export test", "-p", "1")
@@ -223,6 +259,9 @@ func TestCLI_Export(t *testing.T) {
 }
 
 func TestCLI_Import(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow CLI test in short mode")
+	}
 	t.Parallel()
 	tmpDir := setupCLITestDB(t)
 	runBD(t, tmpDir, "create", "Import test", "-p", "1")

internal/beads/routing_integration_test.go

@@ -122,6 +122,9 @@ func TestRoutingWithExplicitOverride(t *testing.T) {
 }
 
 func TestMultiRepoEndToEnd(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow integration test in short mode")
+	}
 
 	// Create primary repo
 	primaryDir := t.TempDir()

internal/compact/compactor_test.go

@@ -209,6 +209,9 @@ func TestCompactTier1_IneligibleIssue(t *testing.T) {
 }
 
 func TestCompactTier1_WithAPI(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow API test in short mode")
+	}
 	if os.Getenv("ANTHROPIC_API_KEY") == "" {
 		t.Skip("ANTHROPIC_API_KEY not set, skipping API test")
 	}
@@ -339,6 +342,9 @@ func TestCompactTier1Batch_WithIneligible(t *testing.T) {
 }
 
 func TestCompactTier1Batch_WithAPI(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow API test in short mode")
+	}
 	if os.Getenv("ANTHROPIC_API_KEY") == "" {
 		t.Skip("ANTHROPIC_API_KEY not set, skipping API test")
 	}

internal/daemon/discovery_test.go

@@ -219,6 +219,9 @@ func TestDiscoverDaemons_Registry(t *testing.T) {
 }
 
 func TestDiscoverDaemons_Legacy(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow daemon discovery test in short mode")
+	}
 	tmpDir := t.TempDir()
 	beadsDir := filepath.Join(tmpDir, ".beads")
 	os.MkdirAll(beadsDir, 0755)

internal/importer/external_ref_test.go

@@ -11,6 +11,9 @@ import (
 )
 
 func TestImportWithExternalRef(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow import test in short mode")
+	}
 	ctx := context.Background()
 	tmpDir := t.TempDir()
 	dbPath := filepath.Join(tmpDir, "test.db")

internal/rpc/comments_test.go

@@ -8,6 +8,9 @@ import (
 )
 
 func TestCommentOperationsViaRPC(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow RPC test in short mode")
+	}
 	_, client, cleanup := setupTestServer(t)
 	defer cleanup()
 

internal/rpc/version_test.go

@@ -13,6 +13,9 @@ import (
 const testVersion100 = "1.0.0"
 
 func TestVersionCompatibility(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow RPC test in short mode")
+	}
 	tests := []struct {
 		name          string
 		serverVersion string

internal/storage/sqlite/adaptive_e2e_test.go

@@ -9,6 +9,9 @@ import (
 )
 
 func TestAdaptiveIDLength_E2E(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping slow E2E test in short mode")
+	}
 	// Create in-memory database
 	db, err := New(":memory:")
 	if err != nil {