chore: Convert scattered TODOs to tracked issues (bd-lrj8)

Created 7 new beads to track TODOs that were previously inline comments:

- bd-7l27: Integrate migration detection into bd doctor (5 files)
- bd-6x6g: Add multi-repo target repo switching in bd create
- bd-ag35: Add daemon RPC endpoints for config and stale check
- bd-2dwo: Remove deprecated daemon logger function
- bd-0qx5: Implement Jira issue timestamp comparison for sync
- bd-7zka: Implement formula features (repeat, for_each, branch, gate, split)
- bd-h048: Refactor sync_test to use direct import logic

Updated 16 TODO comments to include bead ID references for tracking.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

internal/formula/types.go

@@ -167,23 +167,23 @@ type Step struct {
 
 	// Expand references an expansion formula to inline here.
 	// When set, this step is replaced by the expansion's steps.
-	// TODO(future): Not yet implemented in bd cook. Filed as future work.
+	// TODO(bd-7zka): Not yet implemented in bd cook. Filed as future work.
 	Expand string `json:"expand,omitempty"`
 
 	// ExpandVars are variable overrides for the expansion.
-	// TODO(future): Not yet implemented in bd cook. Filed as future work.
+	// TODO(bd-7zka): Not yet implemented in bd cook. Filed as future work.
 	ExpandVars map[string]string `json:"expand_vars,omitempty"`
 
 	// Condition makes this step optional based on a variable.
 	// Format: "{{var}}" (truthy) or "{{var}} == value".
-	// TODO(future): Not yet implemented in bd cook. Filed as future work.
+	// TODO(bd-7zka): Not yet implemented in bd cook. Filed as future work.
 	Condition string `json:"condition,omitempty"`
 
 	// Children are nested steps (for creating epic hierarchies).
 	Children []*Step `json:"children,omitempty"`
 
 	// Gate defines an async wait condition for this step.
-	// TODO(future): Not yet implemented in bd cook. Will integrate with bd-udsi gates.
+	// TODO(bd-7zka): Not yet implemented in bd cook. Will integrate with bd-udsi gates.
 	Gate *Gate `json:"gate,omitempty"`
 
 	// Loop defines iteration for this step.
@@ -207,7 +207,7 @@ type Step struct {
 }
 
 // Gate defines an async wait condition (integrates with bd-udsi).
-// TODO(future): Not yet implemented in bd cook. Schema defined for future use.
+// TODO(bd-7zka): Not yet implemented in bd cook. Schema defined for future use.
 type Gate struct {
 	// Type is the condition type: gh:run, gh:pr, timer, human, mail.
 	Type string `json:"type"`