Fix MCP close tool method signature error (GH #107)

Renamed BdDaemonClient.close() cleanup method to cleanup() to eliminate
method name collision with async close(params) method for closing issues.

Root cause: Python method resolution meant the non-async close(self)
cleanup method was shadowing the async close(self, params) method that
closes issues, causing 'takes 1 positional argument but 2 were given'.

Changes:
- bd_daemon_client.py: Renamed close() -> cleanup()
- server.py: Updated cleanup code to call cleanup() instead of close()
- test_lifecycle.py: Updated tests to use cleanup()

All close-related tests pass. Fixes GitHub issue #107.
Tracked in bd-67 (closed).

integrations/beads-mcp/src/beads_mcp/bd_daemon_client.py

@@ -431,7 +431,7 @@ class BdDaemonClient(BdClientBase):
         except (DaemonNotRunningError, DaemonConnectionError, DaemonError):
             return False
 
-    def close(self) -> None:
+    def cleanup(self) -> None:
         """Close daemon client connections and cleanup resources.
         
         This is called during MCP server shutdown to ensure clean termination.

integrations/beads-mcp/src/beads_mcp/server.py

@@ -70,8 +70,8 @@ def cleanup() -> None:
     # Close all daemon client connections
     for client in _daemon_clients:
         try:
-            if hasattr(client, 'close'):
-                client.close()
+            if hasattr(client, 'cleanup'):
+                client.cleanup()
                 logger.debug(f"Closed daemon client: {client}")
         except Exception as e:
             logger.warning(f"Error closing daemon client: {e}")

integrations/beads-mcp/tests/test_lifecycle.py

@@ -40,8 +40,8 @@ def test_cleanup_function_safe_to_call_multiple_times():
     cleanup()
     cleanup()
     
-    # Client should only be closed once
-    assert mock_client.close.call_count == 1
+    # Client should only be cleaned up once
+    assert mock_client.cleanup.call_count == 1
     assert len(_daemon_clients) == 0
 
 
@@ -55,7 +55,7 @@ def test_cleanup_handles_client_errors_gracefully():
     
     # Create mock clients - one that raises, one that doesn't
     failing_client = MagicMock()
-    failing_client.close.side_effect = Exception("Connection failed")
+    failing_client.cleanup.side_effect = Exception("Connection failed")
     
     good_client = MagicMock()
     
@@ -66,8 +66,8 @@ def test_cleanup_handles_client_errors_gracefully():
     cleanup()
     
     # Both clients should have been attempted
-    assert failing_client.close.called
-    assert good_client.close.called
+    assert failing_client.cleanup.called
+    assert good_client.cleanup.called
     assert len(_daemon_clients) == 0