feat: Support ephemeral protos: cook inline for pour/wisp/bond (bd-rciw)

Changes:
- bd cook: outputs proto JSON to stdout by default, add --persist flag
  for legacy behavior (write to database)
- bd pour: accepts formula names, cooks inline as ephemeral proto,
  spawns mol, then cleans up temporary proto
- bd wisp create: accepts formula names, cooks inline as ephemeral proto,
  creates wisp, then cleans up temporary proto
- bd mol bond: already supported ephemeral protos (gt-8tmz.25)

The ephemeral proto pattern avoids persisting templates in the database.
Protos are only needed temporarily during spawn operations - the spawned
mol/wisp is what gets persisted.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

cmd/bd/cook.go

@@ -18,8 +18,11 @@ import (
 // cookCmd compiles a formula JSON into a proto bead.
 var cookCmd = &cobra.Command{
 	Use:   "cook <formula-file>",
-	Short: "Compile a formula into a proto bead",
-	Long: `Cook transforms a .formula.json file into a proto bead.
+	Short: "Compile a formula into a proto (ephemeral by default)",
+	Long: `Cook transforms a .formula.json file into a proto.
+
+By default, cook outputs the resolved formula as JSON to stdout for
+ephemeral use. The output can be inspected, piped, or saved to a file.
 
 Formulas are high-level workflow templates that support:
   - Variable definitions with defaults and validation
@@ -27,16 +30,24 @@ Formulas are high-level workflow templates that support:
   - Composition rules for bonding formulas together
   - Inheritance via extends
 
-The cook command parses the formula, resolves inheritance, and
-creates a proto bead in the database that can be poured or spawned.
+The --persist flag enables the legacy behavior of writing the proto
+to the database. This is useful when you want to reuse the same
+proto multiple times without re-cooking.
+
+For most workflows, prefer ephemeral protos: pour and wisp commands
+accept formula names directly and cook inline (bd-rciw).
 
 Examples:
-  bd cook mol-feature.formula.json
-  bd cook .beads/formulas/mol-release.formula.json --force
-  bd cook mol-patrol.formula.json --search-path .beads/formulas
+  bd cook mol-feature.formula.json                    # Output JSON to stdout
+  bd cook mol-feature --dry-run                       # Preview steps
+  bd cook mol-release.formula.json --persist          # Write to database
+  bd cook mol-release.formula.json --persist --force  # Replace existing
 
-Output:
-  Creates a proto bead with:
+Output (default):
+  JSON representation of the resolved formula with all steps.
+
+Output (--persist):
+  Creates a proto bead in the database with:
   - ID matching the formula name (e.g., mol-feature)
   - The "template" label for proto identification
   - Child issues for each step
@@ -55,26 +66,29 @@ type cookResult struct {
 }
 
 func runCook(cmd *cobra.Command, args []string) {
-	CheckReadonly("cook")
-
-	ctx := rootCtx
-
-	// Cook requires direct store access for creating protos
-	if store == nil {
-		if daemonClient != nil {
-			fmt.Fprintf(os.Stderr, "Error: cook requires direct database access\n")
-			fmt.Fprintf(os.Stderr, "Hint: use --no-daemon flag: bd --no-daemon cook %s ...\n", args[0])
-		} else {
-			fmt.Fprintf(os.Stderr, "Error: no database connection\n")
-		}
-		os.Exit(1)
-	}
-
 	dryRun, _ := cmd.Flags().GetBool("dry-run")
+	persist, _ := cmd.Flags().GetBool("persist")
 	force, _ := cmd.Flags().GetBool("force")
 	searchPaths, _ := cmd.Flags().GetStringSlice("search-path")
 	prefix, _ := cmd.Flags().GetString("prefix")
 
+	// Only need store access if persisting
+	if persist {
+		CheckReadonly("cook --persist")
+
+		if store == nil {
+			if daemonClient != nil {
+				fmt.Fprintf(os.Stderr, "Error: cook --persist requires direct database access\n")
+				fmt.Fprintf(os.Stderr, "Hint: use --no-daemon flag: bd --no-daemon cook %s --persist ...\n", args[0])
+			} else {
+				fmt.Fprintf(os.Stderr, "Error: no database connection\n")
+			}
+			os.Exit(1)
+		}
+	}
+
+	ctx := rootCtx
+
 	// Create parser with search paths
 	parser := formula.NewParser(searchPaths...)
 
@@ -141,21 +155,6 @@ func runCook(cmd *cobra.Command, args []string) {
 		protoID = prefix + resolved.Formula
 	}
 
-	// Check if proto already exists
-	existingProto, err := store.GetIssue(ctx, protoID)
-	if err == nil && existingProto != nil {
-		if !force {
-			fmt.Fprintf(os.Stderr, "Error: proto %s already exists\n", protoID)
-			fmt.Fprintf(os.Stderr, "Hint: use --force to replace it\n")
-			os.Exit(1)
-		}
-		// Delete existing proto and its children
-		if err := deleteProtoSubgraph(ctx, store, protoID); err != nil {
-			fmt.Fprintf(os.Stderr, "Error deleting existing proto: %v\n", err)
-			os.Exit(1)
-		}
-	}
-
 	// Extract variables used in the formula
 	vars := formula.ExtractVariables(resolved)
 
@@ -203,6 +202,28 @@ func runCook(cmd *cobra.Command, args []string) {
 		return
 	}
 
+	// Ephemeral mode (default): output resolved formula as JSON to stdout (bd-rciw)
+	if !persist {
+		outputJSON(resolved)
+		return
+	}
+
+	// Persist mode: create proto bead in database (legacy behavior)
+	// Check if proto already exists
+	existingProto, err := store.GetIssue(ctx, protoID)
+	if err == nil && existingProto != nil {
+		if !force {
+			fmt.Fprintf(os.Stderr, "Error: proto %s already exists\n", protoID)
+			fmt.Fprintf(os.Stderr, "Hint: use --force to replace it\n")
+			os.Exit(1)
+		}
+		// Delete existing proto and its children
+		if err := deleteProtoSubgraph(ctx, store, protoID); err != nil {
+			fmt.Fprintf(os.Stderr, "Error deleting existing proto: %v\n", err)
+			os.Exit(1)
+		}
+	}
+
 	// Create the proto bead from the formula
 	result, err := cookFormula(ctx, store, resolved, protoID)
 	if err != nil {
@@ -526,7 +547,8 @@ func printFormulaSteps(steps []*formula.Step, indent string) {
 
 func init() {
 	cookCmd.Flags().Bool("dry-run", false, "Preview what would be created")
-	cookCmd.Flags().Bool("force", false, "Replace existing proto if it exists")
+	cookCmd.Flags().Bool("persist", false, "Persist proto to database (legacy behavior)")
+	cookCmd.Flags().Bool("force", false, "Replace existing proto if it exists (requires --persist)")
 	cookCmd.Flags().StringSlice("search-path", []string{}, "Additional paths to search for formula inheritance")
 	cookCmd.Flags().String("prefix", "", "Prefix to prepend to proto ID (e.g., 'gt-' creates 'gt-mol-feature')")
 

cmd/bd/pour.go

@@ -17,7 +17,7 @@ import (
 //   - Proto (solid) -> pour -> Mol (liquid)
 //   - Pour creates persistent, auditable work in .beads/
 var pourCmd = &cobra.Command{
-	Use:   "pour <proto-id>",
+	Use:   "pour <proto-id-or-formula>",
 	Short: "Instantiate a proto as a persistent mol (solid -> liquid)",
 	Long: `Pour a proto into a persistent mol - like pouring molten metal into a mold.
 
@@ -26,13 +26,20 @@ The resulting mol lives in .beads/ (permanent storage) and is synced with git.
 
 Phase transition: Proto (solid) -> pour -> Mol (liquid)
 
+The argument can be:
+  - A proto ID (existing proto in database): bd pour mol-feature
+  - A formula name (cooked inline): bd pour mol-feature --var name=auth
+
+When given a formula name, pour cooks it inline as an ephemeral proto,
+spawns the mol, then cleans up the temporary proto (bd-rciw).
+
 Use pour for:
   - Feature work that spans sessions
   - Important work needing audit trail
   - Anything you might need to reference later
 
 Examples:
-  bd pour mol-feature --var name=auth    # Create persistent mol from proto
+  bd pour mol-feature --var name=auth    # Formula cooked inline
   bd pour mol-release --var version=1.0  # Release workflow
   bd pour mol-review --var pr=123        # Code review workflow`,
 	Args: cobra.ExactArgs(1),
@@ -72,20 +79,28 @@ func runPour(cmd *cobra.Command, args []string) {
 		vars[parts[0]] = parts[1]
 	}
 
-	// Resolve proto ID
-	protoID, err := utils.ResolvePartialID(ctx, store, args[0])
+	// Resolve proto ID or cook formula inline (bd-rciw)
+	// This accepts either:
+	// - An existing proto ID: bd pour mol-feature
+	// - A formula name: bd pour mol-feature (cooked inline as ephemeral proto)
+	protoIssue, cookedProto, err := resolveOrCookFormula(ctx, store, args[0], actor)
 	if err != nil {
-		fmt.Fprintf(os.Stderr, "Error resolving proto ID %s: %v\n", args[0], err)
+		fmt.Fprintf(os.Stderr, "Error: %v\n", err)
 		os.Exit(1)
 	}
 
-	// Verify it's a proto
-	protoIssue, err := store.GetIssue(ctx, protoID)
-	if err != nil {
-		fmt.Fprintf(os.Stderr, "Error loading proto %s: %v\n", protoID, err)
-		os.Exit(1)
+	// Track cooked formula for cleanup
+	cleanupCooked := func() {
+		if cookedProto {
+			_ = deleteProtoSubgraph(ctx, store, protoIssue.ID)
+		}
 	}
+
+	protoID := protoIssue.ID
+
+	// Verify it's a proto
 	if !isProto(protoIssue) {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error: %s is not a proto (missing '%s' label)\n", protoID, MoleculeLabel)
 		os.Exit(1)
 	}
@@ -93,6 +108,7 @@ func runPour(cmd *cobra.Command, args []string) {
 	// Load the proto subgraph
 	subgraph, err := loadTemplateSubgraph(ctx, store, protoID)
 	if err != nil {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error loading proto: %v\n", err)
 		os.Exit(1)
 	}
@@ -107,20 +123,24 @@ func runPour(cmd *cobra.Command, args []string) {
 	for _, attachArg := range attachFlags {
 		attachID, err := utils.ResolvePartialID(ctx, store, attachArg)
 		if err != nil {
+			cleanupCooked()
 			fmt.Fprintf(os.Stderr, "Error resolving attachment ID %s: %v\n", attachArg, err)
 			os.Exit(1)
 		}
 		attachIssue, err := store.GetIssue(ctx, attachID)
 		if err != nil {
+			cleanupCooked()
 			fmt.Fprintf(os.Stderr, "Error loading attachment %s: %v\n", attachID, err)
 			os.Exit(1)
 		}
 		if !isProto(attachIssue) {
+			cleanupCooked()
 			fmt.Fprintf(os.Stderr, "Error: %s is not a proto (missing '%s' label)\n", attachID, MoleculeLabel)
 			os.Exit(1)
 		}
 		attachSubgraph, err := loadTemplateSubgraph(ctx, store, attachID)
 		if err != nil {
+			cleanupCooked()
 			fmt.Fprintf(os.Stderr, "Error loading attachment subgraph %s: %v\n", attachID, err)
 			os.Exit(1)
 		}
@@ -155,6 +175,7 @@ func runPour(cmd *cobra.Command, args []string) {
 		}
 	}
 	if len(missingVars) > 0 {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error: missing required variables: %s\n", strings.Join(missingVars, ", "))
 		fmt.Fprintf(os.Stderr, "Provide them with: --var %s=<value>\n", missingVars[0])
 		os.Exit(1)
@@ -177,6 +198,10 @@ func runPour(cmd *cobra.Command, args []string) {
 				fmt.Printf("  + %s (%d issues)\n", attach.issue.Title, len(attach.subgraph.Issues))
 			}
 		}
+		if cookedProto {
+			fmt.Printf("\n  Note: Formula cooked inline as ephemeral proto.\n")
+		}
+		cleanupCooked()
 		return
 	}
 
@@ -184,6 +209,7 @@ func runPour(cmd *cobra.Command, args []string) {
 	// bd-hobo: Use "mol" prefix for distinct visual recognition
 	result, err := spawnMolecule(ctx, store, subgraph, vars, assignee, actor, false, "mol")
 	if err != nil {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error pouring proto: %v\n", err)
 		os.Exit(1)
 	}
@@ -193,6 +219,7 @@ func runPour(cmd *cobra.Command, args []string) {
 	if len(attachments) > 0 {
 		spawnedMol, err := store.GetIssue(ctx, result.NewEpicID)
 		if err != nil {
+			cleanupCooked()
 			fmt.Fprintf(os.Stderr, "Error loading spawned mol: %v\n", err)
 			os.Exit(1)
 		}
@@ -201,6 +228,7 @@ func runPour(cmd *cobra.Command, args []string) {
 			// pour command always creates persistent (Wisp=false) issues
 			bondResult, err := bondProtoMol(ctx, store, attach.issue, spawnedMol, attachType, vars, "", actor, false, true)
 			if err != nil {
+				cleanupCooked()
 				fmt.Fprintf(os.Stderr, "Error attaching %s: %v\n", attach.id, err)
 				os.Exit(1)
 			}
@@ -208,16 +236,20 @@ func runPour(cmd *cobra.Command, args []string) {
 		}
 	}
 
+	// Clean up ephemeral proto after successful spawn (bd-rciw)
+	cleanupCooked()
+
 	// Schedule auto-flush
 	markDirtyAndScheduleFlush()
 
 	if jsonOutput {
 		type pourResult struct {
 			*InstantiateResult
-			Attached int    `json:"attached"`
-			Phase    string `json:"phase"`
+			Attached     int    `json:"attached"`
+			Phase        string `json:"phase"`
+			CookedInline bool   `json:"cooked_inline,omitempty"`
 		}
-		outputJSON(pourResult{result, totalAttached, "liquid"})
+		outputJSON(pourResult{result, totalAttached, "liquid", cookedProto})
 		return
 	}
 
@@ -227,6 +259,9 @@ func runPour(cmd *cobra.Command, args []string) {
 	if totalAttached > 0 {
 		fmt.Printf("  Attached: %d issues from %d protos\n", totalAttached, len(attachments))
 	}
+	if cookedProto {
+		fmt.Printf("  Ephemeral proto cleaned up after use.\n")
+	}
 }
 
 func init() {

cmd/bd/wisp.go

@@ -70,7 +70,7 @@ const OldThreshold = 24 * time.Hour
 
 // wispCreateCmd instantiates a proto as an ephemeral wisp
 var wispCreateCmd = &cobra.Command{
-	Use:   "create <proto-id>",
+	Use:   "create <proto-id-or-formula>",
 	Short: "Instantiate a proto as an ephemeral wisp (solid -> vapor)",
 	Long: `Create a wisp from a proto - sublimation from solid to vapor.
 
@@ -79,6 +79,13 @@ The resulting wisp is stored in the main database with Wisp=true and NOT exporte
 
 Phase transition: Proto (solid) -> Wisp (vapor)
 
+The argument can be:
+  - A proto ID (existing proto in database): bd wisp create mol-patrol
+  - A formula name (cooked inline): bd wisp create mol-patrol --var name=ace
+
+When given a formula name, wisp cooks it inline as an ephemeral proto,
+creates the wisp, then cleans up the temporary proto (bd-rciw).
+
 Use wisp create for:
   - Patrol cycles (deacon, witness)
   - Health checks and monitoring
@@ -91,8 +98,8 @@ The wisp will:
   - Either evaporate (burn) or condense to digest (squash)
 
 Examples:
-  bd wisp create mol-patrol                    # Ephemeral patrol cycle
-  bd wisp create mol-health-check              # One-time health check
+  bd wisp create mol-patrol                       # Formula cooked inline
+  bd wisp create mol-health-check                 # One-time health check
   bd wisp create mol-diagnostics --var target=db  # Diagnostic run`,
 	Args: cobra.ExactArgs(1),
 	Run:  runWispCreate,
@@ -128,48 +135,28 @@ func runWispCreate(cmd *cobra.Command, args []string) {
 		vars[parts[0]] = parts[1]
 	}
 
-	// Resolve proto ID
-	protoID := args[0]
-	// Try to resolve partial ID if it doesn't look like a full ID
-	if !strings.HasPrefix(protoID, "bd-") && !strings.HasPrefix(protoID, "gt-") && !strings.HasPrefix(protoID, "mol-") {
-		// Might be a partial ID, try to resolve
-		if resolved, err := resolvePartialIDDirect(ctx, protoID); err == nil {
-			protoID = resolved
-		}
-	}
-
-	// Check if it's a named molecule (mol-xxx) - look up in catalog
-	if strings.HasPrefix(protoID, "mol-") {
-		// Find the proto by name
-		issues, err := store.SearchIssues(ctx, "", types.IssueFilter{
-			Labels: []string{MoleculeLabel},
-		})
-		if err != nil {
-			fmt.Fprintf(os.Stderr, "Error searching for proto: %v\n", err)
-			os.Exit(1)
-		}
-		found := false
-		for _, issue := range issues {
-			if strings.Contains(issue.Title, protoID) || issue.ID == protoID {
-				protoID = issue.ID
-				found = true
-				break
-			}
-		}
-		if !found {
-			fmt.Fprintf(os.Stderr, "Error: proto '%s' not found in catalog\n", args[0])
-			fmt.Fprintf(os.Stderr, "Hint: run 'bd mol catalog' to see available protos\n")
-			os.Exit(1)
-		}
-	}
-
-	// Load the proto
-	protoIssue, err := store.GetIssue(ctx, protoID)
+	// Resolve proto ID or cook formula inline (bd-rciw)
+	// This accepts either:
+	// - An existing proto ID: bd wisp create mol-patrol
+	// - A formula name: bd wisp create mol-patrol (cooked inline as ephemeral proto)
+	protoIssue, cookedProto, err := resolveOrCookFormula(ctx, store, args[0], actor)
 	if err != nil {
-		fmt.Fprintf(os.Stderr, "Error loading proto %s: %v\n", protoID, err)
+		fmt.Fprintf(os.Stderr, "Error: %v\n", err)
 		os.Exit(1)
 	}
+
+	// Track cooked formula for cleanup
+	cleanupCooked := func() {
+		if cookedProto {
+			_ = deleteProtoSubgraph(ctx, store, protoIssue.ID)
+		}
+	}
+
+	protoID := protoIssue.ID
+
+	// Verify it's a proto
 	if !isProtoIssue(protoIssue) {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error: %s is not a proto (missing '%s' label)\n", protoID, MoleculeLabel)
 		os.Exit(1)
 	}
@@ -177,6 +164,7 @@ func runWispCreate(cmd *cobra.Command, args []string) {
 	// Load the proto subgraph
 	subgraph, err := loadTemplateSubgraph(ctx, store, protoID)
 	if err != nil {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error loading proto: %v\n", err)
 		os.Exit(1)
 	}
@@ -190,6 +178,7 @@ func runWispCreate(cmd *cobra.Command, args []string) {
 		}
 	}
 	if len(missingVars) > 0 {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error: missing required variables: %s\n", strings.Join(missingVars, ", "))
 		fmt.Fprintf(os.Stderr, "Provide them with: --var %s=<value>\n", missingVars[0])
 		os.Exit(1)
@@ -202,6 +191,10 @@ func runWispCreate(cmd *cobra.Command, args []string) {
 			newTitle := substituteVariables(issue.Title, vars)
 			fmt.Printf("  - %s (from %s)\n", newTitle, issue.ID)
 		}
+		if cookedProto {
+			fmt.Printf("\n  Note: Formula cooked inline as ephemeral proto.\n")
+		}
+		cleanupCooked()
 		return
 	}
 
@@ -209,24 +202,32 @@ func runWispCreate(cmd *cobra.Command, args []string) {
 	// bd-hobo: Use "wisp" prefix for distinct visual recognition
 	result, err := spawnMolecule(ctx, store, subgraph, vars, "", actor, true, "wisp")
 	if err != nil {
+		cleanupCooked()
 		fmt.Fprintf(os.Stderr, "Error creating wisp: %v\n", err)
 		os.Exit(1)
 	}
 
+	// Clean up ephemeral proto after successful spawn (bd-rciw)
+	cleanupCooked()
+
 	// Wisps are in main db but don't trigger JSONL export (Wisp flag excludes them)
 
 	if jsonOutput {
 		type wispCreateResult struct {
 			*InstantiateResult
-			Phase string `json:"phase"`
+			Phase        string `json:"phase"`
+			CookedInline bool   `json:"cooked_inline,omitempty"`
 		}
-		outputJSON(wispCreateResult{result, "vapor"})
+		outputJSON(wispCreateResult{result, "vapor", cookedProto})
 		return
 	}
 
 	fmt.Printf("%s Created wisp: %d issues\n", ui.RenderPass("✓"), result.Created)
 	fmt.Printf("  Root issue: %s\n", result.NewEpicID)
 	fmt.Printf("  Phase: vapor (ephemeral, not exported to JSONL)\n")
+	if cookedProto {
+		fmt.Printf("  Ephemeral proto cleaned up after use.\n")
+	}
 	fmt.Printf("\nNext steps:\n")
 	fmt.Printf("  bd close %s.<step>       # Complete steps\n", result.NewEpicID)
 	fmt.Printf("  bd mol squash %s         # Condense to digest (promotes to persistent)\n", result.NewEpicID)