diff --git a/.beads/issues.jsonl b/.beads/issues.jsonl
index 2ed57a3f..c223e3ce 100644
--- a/.beads/issues.jsonl
+++ b/.beads/issues.jsonl
@@ -152,6 +152,7 @@
 {"id":"bd-7yg","title":"Git merge driver uses invalid placeholders (%L, %R instead of %A, %B)","description":"## Problem\n\nThe beads git merge driver is configured with invalid Git placeholders:\n\n```\ngit config merge.beads.driver \"bd merge %A %O %L %R\"\n```\n\nGit doesn't recognize `%L` or `%R` as valid merge driver placeholders. The valid placeholders are:\n- `%O` = base (common ancestor)\n- `%A` = current version (ours)\n- `%B` = other version (theirs)\n\n## Impact\n\n- Affects ALL users when they have `.beads/beads.jsonl` merge conflicts\n- Automatic JSONL merge fails with error: \"error reading left file: failed to open file: open 7: no such file or directory\"\n- Users must manually resolve conflicts instead of getting automatic merge\n\n## Root Cause\n\nThe `bd init` command (or wherever the merge driver is configured) is using non-standard placeholders. When Git encounters `%L` and `%R`, it either passes them literally or interprets them incorrectly.\n\n## Fix\n\nUpdate the merge driver configuration to:\n```\ngit config merge.beads.driver \"bd merge %A %O %A %B\"\n```\n\nWhere:\n- 1st `%A` = output file (current file, will be overwritten)\n- `%O` = base (common ancestor)\n- 2nd `%A` = left/current version\n- `%B` = right/other version\n\n## Action Items\n\n1. Fix `bd init` (or equivalent setup command) to use correct placeholders\n2. Add migration/warning for existing users with misconfigured merge driver\n3. Update documentation with correct merge driver setup\n4. Consider adding validation when `bd init` is run","status":"tombstone","priority":1,"issue_type":"bug","created_at":"2025-11-21T19:51:55.747608-05:00","updated_at":"2025-12-25T01:21:01.952723-08:00","deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"}
 {"id":"bd-7z4","title":"Add tests for delete operations","description":"Core delete functionality including deleteViaDaemon, createTombstone, and deleteIssue functions have 0% coverage. These are critical for data integrity and need comprehensive test coverage.","status":"closed","priority":1,"issue_type":"task","assignee":"beads/slit","created_at":"2025-12-18T07:00:34.867680882-07:00","updated_at":"2025-12-23T23:48:50.087306-08:00","closed_at":"2025-12-23T23:48:50.087306-08:00","close_reason":"Added comprehensive tests for deleteViaDaemon, createTombstone, and deleteIssue functions","dependencies":[{"issue_id":"bd-7z4","depends_on_id":"bd-6ss","type":"discovered-from","created_at":"2025-12-18T07:00:34.870254935-07:00","created_by":"matt"}]}
 {"id":"bd-801b","title":"Merge: bd-bqcc","description":"branch: polecat/capable\ntarget: main\nsource_issue: bd-bqcc\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-23T00:26:04.306756-08:00","updated_at":"2025-12-23T01:33:25.728087-08:00","closed_at":"2025-12-23T01:33:25.728087-08:00","close_reason":"Merged to main"}
+{"id":"bd-83f5","title":"Remove top-level comment alias","description":"Remove 'comment' as top-level command. Users should use 'comments add' instead. Reduces command surface area.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-28T12:59:12.33579-08:00","created_by":"stevey","updated_at":"2025-12-28T13:06:53.335122-08:00","closed_at":"2025-12-28T13:06:53.335122-08:00","close_reason":"Closed"}
 {"id":"bd-89f89fc0","title":"Remove unreachable RPC methods","description":"Several RPC server and client methods are unreachable and should be removed:\n\nServer methods (internal/rpc/server.go):\n- `Server.GetLastImportTime` (line 2116)\n- `Server.SetLastImportTime` (line 2123)\n- `Server.findJSONLPath` (line 2255)\n\nClient methods (internal/rpc/client.go):\n- `Client.Import` (line 311) - RPC import not used (daemon uses autoimport)\n\nEvidence:\n```bash\ngo run golang.org/x/tools/cmd/deadcode@latest -test ./...\n```\n\nImpact: Removes ~80 LOC of unused RPC code","status":"tombstone","priority":2,"issue_type":"task","created_at":"2025-10-28T16:20:02.432202-07:00","updated_at":"2025-12-25T01:21:01.952723-08:00","close_reason":"Closed","deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"}
 {"id":"bd-8b0x","title":"Remove molecule.go (simple instantiation)","description":"molecule.go uses is_template field for simple single-issue cloning. This is too simple for what molecules should be - full DAG orchestration. The use case is covered by bd mol bond with a single-issue molecule. Delete molecule.go and its commands.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-20T23:52:15.041776-08:00","updated_at":"2025-12-21T00:04:32.335849-08:00","closed_at":"2025-12-21T00:04:32.335849-08:00","close_reason":"Removed molecule.go - use bd mol bond instead","dependencies":[{"issue_id":"bd-8b0x","depends_on_id":"bd-ffjt","type":"blocks","created_at":"2025-12-20T23:52:25.807967-08:00","created_by":"daemon"}]}
 {"id":"bd-8ca7","title":"Merge: bd-au0.6","description":"branch: polecat/furiosa\ntarget: main\nsource_issue: bd-au0.6\nrig: beads","status":"closed","priority":1,"issue_type":"merge-request","created_at":"2025-12-23T20:42:30.870178-08:00","updated_at":"2025-12-23T21:21:57.695179-08:00","closed_at":"2025-12-23T21:21:57.695179-08:00","close_reason":"stale - no code pushed"}
@@ -281,6 +282,7 @@
 {"id":"bd-dyy","title":"Review PR #513: fix hooks install docs","description":"Review and merge PR #513 from aspiers. This PR fixes incorrect docs for how to install git hooks - updates README to use bd hooks install instead of removed install.sh. Simple 1-line change. URL: https://github.com/anthropics/beads/pull/513","status":"tombstone","priority":2,"issue_type":"task","created_at":"2025-12-13T08:15:14.838772+11:00","updated_at":"2025-12-25T01:21:01.952723-08:00","deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"}
 {"id":"bd-e1085716","title":"bd validate - Comprehensive health check","description":"Run all validation checks in one command.\n\nChecks:\n- Duplicates\n- Orphaned dependencies\n- Test pollution\n- Git conflicts\n\nSupports --fix-all for auto-repair.\n\nDepends on bd-cbed9619.1, bd-0dcea000, bd-31aab707, bd-9826b69a.\n\nFiles: cmd/bd/validate.go (new)","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-10-29T23:05:13.980679-07:00","updated_at":"2025-12-25T01:21:01.952723-08:00","close_reason":"Closed","deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"}
 {"id":"bd-e7ou","title":"Fix --as flag: uses title instead of ID in mol bond","description":"In bondProtoProto, the --as flag is documented as 'Custom ID for compound proto' but the implementation uses it as the title, not the issue ID.\n\n**Current behavior (mol.go:637-638):**\n```go\nif customID != '' {\n    compoundTitle = customID  // Used as title, not ID\n}\n```\n\n**Options:**\n1. Change flag description to say 'Custom title' (documentation fix)\n2. Actually use it as a custom ID prefix or full ID (feature change)\n3. Add separate --title flag and make --as actually set ID\n\nRecommend option 1 for simplest fix - change 'Custom ID' to 'Custom title' in the flag description.","status":"closed","priority":3,"issue_type":"bug","created_at":"2025-12-21T10:22:59.069368-08:00","updated_at":"2025-12-21T21:18:48.514513-08:00","closed_at":"2025-12-21T21:18:48.514513-08:00","close_reason":"Fixed - renamed customID to customTitle and updated dry-run output"}
+{"id":"bd-e8kq","title":"Consolidate migrate-* commands into migrate subcommands","description":"Move migrate-hash-ids, migrate-issues, migrate-sync, migrate-tombstones under 'migrate' as subcommands. Reduces 5 top-level commands to 1.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-28T12:59:09.187369-08:00","created_by":"stevey","updated_at":"2025-12-28T13:02:51.321846-08:00","closed_at":"2025-12-28T13:02:51.321848-08:00"}
 {"id":"bd-efo6","title":"Test cross-rig issue creation","description":"Testing --rig flag from town root","status":"tombstone","priority":3,"issue_type":"task","created_at":"2025-12-27T00:43:21.006012-08:00","created_by":"stevey","updated_at":"2025-12-27T00:43:27.389223-08:00","deleted_at":"2025-12-27T00:43:27.389223-08:00","deleted_by":"daemon","delete_reason":"delete","original_type":"task"}
 {"id":"bd-eijl","title":"bd ship command for publishing capabilities","description":"Add `bd ship \u003ccapability\u003e` command that:\n\n1. Finds issue with `export:\u003ccapability\u003e` label\n2. Validates issue is closed (or --force to override)\n3. Adds `provides:\u003ccapability\u003e` label\n4. Protects `provides:*` namespace (only bd ship can add these labels)\n\nExample:\n```bash\nbd ship mol-run-assignee\n# Output: Shipped mol-run-assignee (bd-xyz)\n```\n\nPart of cross-project dependency system.\nSee: gastown/docs/cross-project-deps.md","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-12-21T22:37:19.123024-08:00","updated_at":"2025-12-21T23:11:47.498859-08:00","closed_at":"2025-12-21T23:11:47.498859-08:00","close_reason":"Implemented: bd ship command with export:/provides: labels, namespace protection in label add"}
 {"id":"bd-elqd","title":"Systematic bd sync stability investigation","description":"## Context\n\nbd sync has chronic instability issues that have persisted since inception:\n- issues.jsonl is always dirty after push\n- bd sync often creates messes requiring manual cleanup\n- Problems escalating despite accumulated bug fixes\n- Workarounds are getting increasingly draconian\n\n## Goal\n\nSystematically observe and diagnose bd sync failures rather than applying band-aid fixes.\n\n## Approach\n\n1. Start fresh session with latest binary (all fixes applied)\n2. Run bd sync and carefully observe what happens\n3. Document exact sequence of events when things go wrong\n4. File specific issues for each discrete problem identified\n5. Track the root causes, not just symptoms\n\n## Test Environment\n\n- Fresh clone or clean state\n- Latest bd binary with all bug fixes\n- Monitor both local and remote JSONL state\n- Check for timing issues, race conditions, merge conflicts\n\n## Success Criteria\n\n- Identify root causes of sync instability\n- Create actionable issues for each problem\n- Eventually achieve stable bd sync (no manual intervention needed)","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-16T22:57:25.35289-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"}
@@ -401,6 +403,7 @@
 {"id":"bd-lfiu","title":"bd dep add: Auto-resolve cross-rig IDs using routes.jsonl","description":"Currently, adding a dependency to an issue in another rig requires verbose external reference syntax:\n\n```bash\n# This fails - can't resolve bd-* from gastown context\nbd dep add gt-xyz bd-abc\n\n# This works but is verbose\nbd dep add gt-xyz external:beads:bd-abc\n```\n\nThe town-level routing (~/gt/.beads/routes.jsonl) already knows how to map prefixes to rigs:\n```json\n{\"prefix\": \"gt-\", \"path\": \"gastown/mayor/rig\"}\n{\"prefix\": \"bd-\", \"path\": \"beads/mayor/rig\"}\n```\n\nEnhancement: When `bd dep add` encounters an ID with a foreign prefix, it should:\n1. Check routes.jsonl for the prefix mapping\n2. Auto-resolve to external:\u003cproject\u003e:\u003cid\u003e internally\n3. Allow the simpler `bd dep add gt-xyz bd-abc` syntax\n\nThis would make cross-rig dependencies much more ergonomic.","status":"closed","priority":3,"issue_type":"feature","assignee":"beads/dave","created_at":"2025-12-26T20:20:40.814713-08:00","updated_at":"2025-12-26T23:47:52.82107-08:00","closed_at":"2025-12-26T23:47:52.82107-08:00","close_reason":"Implemented in commit a958c834"}
 {"id":"bd-likt","title":"Add daemon RPC support for gate commands","description":"Add daemon RPC support for gate commands.\n\n## Current State\nGate commands require --no-daemon flag because they use direct SQLite access:\n- Gate create needs to write await_type, await_id, timeout_ns, waiters fields\n- Gate wait needs to update waiters JSON array\n- Daemon RPC doesnt have methods for these operations\n\n## Implementation\n\n### 1. Add RPC methods to internal/rpc/protocol.go\n\n```go\n// Gate operations\ntype GateCreateArgs struct {\n    Title     string        \\`json:\"title\"\\`\n    AwaitType string        \\`json:\"await_type\"\\`\n    AwaitID   string        \\`json:\"await_id\"\\`\n    Timeout   time.Duration \\`json:\"timeout\"\\`\n    Waiters   []string      \\`json:\"waiters\"\\`\n}\n\ntype GateCreateResult struct {\n    Issue *types.Issue \\`json:\"issue\"\\`\n}\n\ntype GateListArgs struct {\n    All bool \\`json:\"all\"\\` // Include closed gates\n}\n\ntype GateListResult struct {\n    Gates []*types.Issue \\`json:\"gates\"\\`\n}\n\ntype GateWaitArgs struct {\n    GateID  string   \\`json:\"gate_id\"\\`\n    Waiters []string \\`json:\"waiters\"\\` // Additional waiters to add\n}\n\ntype GateWaitResult struct {\n    Gate        *types.Issue \\`json:\"gate\"\\`\n    AddedCount  int          \\`json:\"added_count\"\\`\n}\n```\n\n### 2. Add handler methods to internal/daemon/rpc_handler.go\n\n```go\nfunc (h *RPCHandler) GateCreate(ctx context.Context, args *rpc.GateCreateArgs) (*rpc.GateCreateResult, error) {\n    now := time.Now()\n    gate := \u0026types.Issue{\n        Title:     args.Title,\n        IssueType: types.TypeGate,\n        Status:    types.StatusOpen,\n        Priority:  1,\n        Assignee:  \"deacon/\",\n        Wisp:      true,\n        AwaitType: args.AwaitType,\n        AwaitID:   args.AwaitID,\n        Timeout:   args.Timeout,\n        Waiters:   args.Waiters,\n        CreatedAt: now,\n        UpdatedAt: now,\n    }\n    gate.ContentHash = gate.ComputeContentHash()\n    \n    if err := h.store.CreateIssue(ctx, gate, h.actor); err != nil {\n        return nil, err\n    }\n    \n    return \u0026rpc.GateCreateResult{Issue: gate}, nil\n}\n\nfunc (h *RPCHandler) GateList(ctx context.Context, args *rpc.GateListArgs) (*rpc.GateListResult, error) {\n    gateType := types.TypeGate\n    filter := types.IssueFilter{IssueType: \u0026gateType}\n    if !args.All {\n        openStatus := types.StatusOpen\n        filter.Status = \u0026openStatus\n    }\n    \n    gates, err := h.store.SearchIssues(ctx, \"\", filter)\n    if err != nil {\n        return nil, err\n    }\n    \n    return \u0026rpc.GateListResult{Gates: gates}, nil\n}\n\nfunc (h *RPCHandler) GateWait(ctx context.Context, args *rpc.GateWaitArgs) (*rpc.GateWaitResult, error) {\n    gate, err := h.store.GetIssue(ctx, args.GateID)\n    if err != nil {\n        return nil, err\n    }\n    if gate.IssueType != types.TypeGate {\n        return nil, fmt.Errorf(\"%s is not a gate\", args.GateID)\n    }\n    \n    // Merge waiters (dedupe)\n    waiterSet := make(map[string]bool)\n    for _, w := range gate.Waiters {\n        waiterSet[w] = true\n    }\n    added := 0\n    for _, w := range args.Waiters {\n        if !waiterSet[w] {\n            gate.Waiters = append(gate.Waiters, w)\n            waiterSet[w] = true\n            added++\n        }\n    }\n    \n    if added \u003e 0 {\n        // Update via store\n        updates := map[string]interface{}{\n            \"waiters\": gate.Waiters,\n        }\n        if err := h.store.UpdateIssue(ctx, args.GateID, updates, h.actor); err != nil {\n            return nil, err\n        }\n    }\n    \n    return \u0026rpc.GateWaitResult{Gate: gate, AddedCount: added}, nil\n}\n```\n\n### 3. Register methods in daemon\n\nIn internal/daemon/server.go, register the new methods:\n```go\nrpc.RegisterMethod(\"gate.create\", h.GateCreate)\nrpc.RegisterMethod(\"gate.list\", h.GateList)\nrpc.RegisterMethod(\"gate.wait\", h.GateWait)\n```\n\n### 4. Add client methods to internal/rpc/client.go\n\n```go\nfunc (c *Client) GateCreate(ctx context.Context, args *GateCreateArgs) (*GateCreateResult, error) {\n    var result GateCreateResult\n    err := c.Call(ctx, \"gate.create\", args, \u0026result)\n    return \u0026result, err\n}\n\nfunc (c *Client) GateList(ctx context.Context, args *GateListArgs) (*GateListResult, error) {\n    var result GateListResult\n    err := c.Call(ctx, \"gate.list\", args, \u0026result)\n    return \u0026result, err\n}\n\nfunc (c *Client) GateWait(ctx context.Context, args *GateWaitArgs) (*GateWaitResult, error) {\n    var result GateWaitResult\n    err := c.Call(ctx, \"gate.wait\", args, \u0026result)\n    return \u0026result, err\n}\n```\n\n### 5. Update cmd/bd/gate.go to use daemon\n\n```go\n// In gateCreateCmd Run:\nif daemonClient != nil {\n    result, err := daemonClient.GateCreate(ctx, \u0026rpc.GateCreateArgs{\n        Title:     title,\n        AwaitType: awaitType,\n        AwaitID:   awaitID,\n        Timeout:   timeout,\n        Waiters:   notifyAddrs,\n    })\n    if err != nil {\n        FatalError(\"gate create: %v\", err)\n    }\n    gate = result.Issue\n} else {\n    // Existing direct store code\n}\n```\n\n## Files to Modify\n\n1. **internal/rpc/protocol.go** - Add Gate*Args/Result types\n2. **internal/daemon/rpc_handler.go** - Add handler methods\n3. **internal/daemon/server.go** - Register methods\n4. **internal/rpc/client.go** - Add client methods\n5. **cmd/bd/gate.go** - Use daemon client when available\n\n## Testing\n\n```bash\n# Start daemon\nbd daemon start\n\n# Test via daemon (should work without --no-daemon)\nbd gate create --await timer:5m --notify beads/dave\nbd gate list\nbd gate wait \u003cid\u003e --notify beads/alice\n\n# Verify daemon handled it\nbd daemons logs . | grep gate\n```\n\n## Success Criteria\n- All gate commands work without --no-daemon\n- Same behavior in daemon vs direct mode\n- Waiters array updates correctly via RPC\n- Tests pass for RPC gate operations","status":"closed","priority":3,"issue_type":"task","assignee":"beads/Gater","created_at":"2025-12-23T12:13:25.778412-08:00","updated_at":"2025-12-23T13:45:58.398604-08:00","closed_at":"2025-12-23T13:45:58.398604-08:00","close_reason":"Implemented daemon RPC support for all gate commands","dependencies":[{"issue_id":"bd-likt","depends_on_id":"bd-udsi","type":"discovered-from","created_at":"2025-12-23T12:13:36.174822-08:00","created_by":"daemon"},{"issue_id":"bd-likt","depends_on_id":"bd-iz5t","type":"parent-child","created_at":"2025-12-23T12:44:07.891992-08:00","created_by":"daemon"}]}
 {"id":"bd-lk39","title":"Add composite index (issue_id, event_type) on events table","description":"GetCloseReason and GetCloseReasonsForIssues filter by both issue_id and event_type.\n\n**Query (queries.go:355-358):**\n```sql\nSELECT comment FROM events\nWHERE issue_id = ? AND event_type = ?\nORDER BY created_at DESC LIMIT 1\n```\n\n**Problem:** Currently uses idx_events_issue but must filter event_type in memory.\n\n**Solution:** Add migration:\n```sql\nCREATE INDEX IF NOT EXISTS idx_events_issue_type ON events(issue_id, event_type);\n```\n\n**Priority:** Low - events table is typically small relative to issues.","status":"closed","priority":4,"issue_type":"task","created_at":"2025-12-22T22:58:54.070587-08:00","updated_at":"2025-12-22T23:15:13.841988-08:00","closed_at":"2025-12-22T23:15:13.841988-08:00","close_reason":"Implemented in migration 026_additional_indexes.go","dependencies":[{"issue_id":"bd-lk39","depends_on_id":"bd-h0we","type":"discovered-from","created_at":"2025-12-22T22:58:54.071286-08:00","created_by":"daemon"}]}
+{"id":"bd-ll2n","title":"Move relate/unrelate under dep command","description":"Make relate and unrelate subcommands of dep (dep relate, dep unrelate). They're dependency operations and belong there.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-28T12:59:10.379321-08:00","created_by":"stevey","updated_at":"2025-12-28T13:04:02.520266-08:00","closed_at":"2025-12-28T13:04:02.520266-08:00","close_reason":"Closed"}
 {"id":"bd-llfl","title":"Improve test coverage for cmd/bd CLI (26.2% → 50%)","description":"The main CLI package (cmd/bd) has only 26.2% test coverage. CLI commands should have at least 50% coverage to ensure reliability.\n\nKey areas with low/no coverage:\n- daemon_autostart.go (multiple 0% functions)\n- compact.go (several 0% functions)\n- Various command handlers\n\nCurrent coverage: 26.2%\nTarget coverage: 50%","notes":"## Progress Update (2025-12-23)\n\n### Tests Added\nAdded 683 lines of new tests across 3 files:\n- cmd/bd/daemon_config_test.go (144 lines)\n- cmd/bd/utils_test.go (484 lines)  \n- cmd/bd/autostart_test.go (55 additional lines)\n\n### Functions Now Tested\n- daemon_config.go: ensureBeadsDir, getPIDFilePath, getLogFilePath, getSocketPathForPID\n- daemon_autostart.go: determineSocketPath, isDaemonRunningQuiet\n- activity.go: printEvent\n- cleanup.go: showCleanupDeprecationHint\n- upgrade.go: pluralize\n- wisp.go: formatTimeAgo\n- list.go: pinIndicator, sortIssues\n- hooks.go: FormatHookWarnings, isRebaseInProgress, hasBeadsJSONL\n- template.go: extractIDSuffix\n- thanks.go: getContributorsSorted\n\n### Coverage Results\n- Before: 22.5%\n- After: 23.1%\n- Delta: +0.6%\n\n### Remaining Work\nMost remaining untested code (77%) involves:\n1. Daemon/RPC operations (runDaemonLoop, tryAutoStartDaemon, etc.)\n2. Command handlers that require database/daemon setup\n3. Git operations (runPreCommitHook, runPostMergeHook, etc.)\n\nTo reach 50%, would need to:\n- Add integration tests with mocked daemon\n- Add scripttest tests for command handlers\n- Add more database-dependent tests\n\nCommit: 4f949c19","status":"open","priority":2,"issue_type":"task","created_at":"2025-12-13T20:43:03.123341-08:00","updated_at":"2025-12-28T05:39:24.91767-08:00"}
 {"id":"bd-lo4","title":"Test pinned issue","status":"tombstone","priority":2,"issue_type":"task","created_at":"2025-12-18T21:44:49.031385-08:00","updated_at":"2025-12-18T21:47:25.055109-08:00","deleted_at":"2025-12-18T21:47:25.055109-08:00","deleted_by":"daemon","delete_reason":"delete","original_type":"task"}
 {"id":"bd-lsv4","title":"GH#444: Fix inconsistent status naming in_progress vs in-progress","description":"Documentation uses in-progress (hyphen) but code expects in_progress (underscore). Update all docs to use canonical in_progress. See GitHub issue #444.","status":"tombstone","priority":2,"issue_type":"bug","created_at":"2025-12-16T01:03:14.349425-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"}
@@ -657,6 +660,7 @@
 {"id":"bd-y8bj","title":"Auto-detect identity from directory context for bd mail","description":"Currently bd mail inbox defaults to git user name, requiring --identity flag with exact format.\n\n## Problem\n- Mail sent to `gastown/crew/max`\n- Max runs `bd mail inbox` → defaults to 'Steve Yegge' (git user)\n- Max must know to use `--identity 'gastown/crew/max'` with exact slashes\n\n## Proposed Fix\nAuto-detect identity from directory context when in a Gas Town workspace:\n- In `/Users/stevey/gt/gastown/crew/max`, infer identity = `gastown/crew/max`\n- Pattern: `\u003ctown\u003e/\u003crig\u003e/\u003crole\u003e/\u003cname\u003e` → `\u003crig\u003e/\u003crole\u003e/\u003cname\u003e`\n\n## Additional Improvements\n1. Support GT_IDENTITY env var (set by gt crew at / session spawning)\n2. Support identity in .beads/config.yaml\n3. Normalize format: accept both slashes and dashes as equivalent\n\n## Context\nDiscovered during crew-to-crew work assignment. Max couldn't see mail despite correct nudge because identity defaulted wrong.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-12-20T17:22:53.938586-08:00","updated_at":"2025-12-20T18:12:58.472262-08:00","closed_at":"2025-12-20T17:58:51.034201-08:00"}
 {"id":"bd-y8tn","title":"Test Molecule","description":"A test molecule","status":"closed","priority":2,"issue_type":"molecule","created_at":"2025-12-19T18:30:24.491279-08:00","updated_at":"2025-12-19T18:31:12.49898-08:00","closed_at":"2025-12-19T18:31:12.49898-08:00","close_reason":"test molecule - deleting"}
 {"id":"bd-yck","title":"Fix checkExistingBeadsData to be worktree-aware","description":"The checkExistingBeadsData function in cmd/bd/init.go checks for .beads in the current working directory, but for worktrees it should check the main repository root instead. This prevents proper worktree compatibility.","status":"closed","priority":2,"issue_type":"bug","assignee":"beads/hotel","created_at":"2025-12-07T16:48:32.082776345-07:00","updated_at":"2025-12-23T22:33:32.412338-08:00","closed_at":"2025-12-23T22:33:32.412338-08:00","close_reason":"Already fixed in commit e01b7412d (2025-12-13). The checkExistingBeadsData function now uses git.IsWorktree() and git.GetMainRepoRoot() to check the main repository root for worktrees."}
+{"id":"bd-ycrq","title":"Consolidate daemon/daemons commands","description":"Merge daemons functionality into daemon command with subcommands. Currently have both 'daemon' and 'daemons' at top level.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-28T12:59:11.393637-08:00","created_by":"stevey","updated_at":"2025-12-28T13:05:28.776344-08:00","closed_at":"2025-12-28T13:05:28.776344-08:00","close_reason":"Closed"}
 {"id":"bd-ykd9","title":"Add bd doctor --fix flag to automatically repair issues","description":"Add bd doctor --fix flag to automatically repair detected issues.\n\n## Current State\n- Doctor checks return issues with \"Fix\" field containing fix instructions\n- No automatic fix execution\n- User must manually follow fix instructions\n\n## Implementation\n\n### 1. Add --fix flag to doctor.go\n```go\n// In cmd/bd/doctor.go init()\ndoctorCmd.Flags().Bool(\"fix\", false, \"Automatically fix detected issues\")\ndoctorCmd.Flags().Bool(\"yes\", false, \"Skip confirmation prompts (use with --fix)\")\n```\n\n### 2. Create fix registry (cmd/bd/doctor/fix/registry.go)\n```go\npackage fix\n\n// Fixer can automatically repair an issue\ntype Fixer interface {\n    // CanFix returns true if this fixer handles the given check name\n    CanFix(checkName string) bool\n    // Fix attempts to repair the issue, returns error if failed\n    Fix(ctx context.Context, issue *CheckResult) error\n    // Description returns human-readable description of what will be fixed\n    Description() string\n}\n\nvar registry []Fixer\n\nfunc Register(f Fixer) {\n    registry = append(registry, f)\n}\n\nfunc GetFixer(checkName string) Fixer {\n    for _, f := range registry {\n        if f.CanFix(checkName) {\n            return f\n        }\n    }\n    return nil\n}\n```\n\n### 3. Implement fixers (one per file)\n\n**cmd/bd/doctor/fix/hooks.go**\n```go\ntype HooksFixer struct{}\n\nfunc (f *HooksFixer) CanFix(name string) bool {\n    return name == \"git-hooks\" || name == \"hooks-outdated\"\n}\n\nfunc (f *HooksFixer) Fix(ctx context.Context, issue *CheckResult) error {\n    return hooks.Install(\".\", true) // force reinstall\n}\n\nfunc (f *HooksFixer) Description() string {\n    return \"Reinstall git hooks\"\n}\n\nfunc init() {\n    Register(\u0026HooksFixer{})\n}\n```\n\n**cmd/bd/doctor/fix/sync_branch.go**\n```go\ntype SyncBranchFixer struct{}\n\nfunc (f *SyncBranchFixer) CanFix(name string) bool {\n    return name == \"sync-branch-missing\" || name == \"sync-branch-diverged\"\n}\n\nfunc (f *SyncBranchFixer) Fix(ctx context.Context, issue *CheckResult) error {\n    // Reset to remote or create branch\n    return syncbranch.ResetToRemote(ctx, repoRoot, branch, jsonlPath)\n}\n```\n\n**cmd/bd/doctor/fix/merge_driver.go**\n```go\ntype MergeDriverFixer struct{}\n\nfunc (f *MergeDriverFixer) CanFix(name string) bool {\n    return name == \"merge-driver-missing\" || name == \"merge-driver-outdated\"\n}\n\nfunc (f *MergeDriverFixer) Fix(ctx context.Context, issue *CheckResult) error {\n    return setupMergeDriver()\n}\n```\n\n### 4. Update doctor run logic\n\n```go\nfunc runDoctor(cmd *cobra.Command, args []string) {\n    issues := runAllChecks()\n    \n    if \\!fixFlag {\n        // Existing behavior - just display issues\n        displayIssues(issues)\n        return\n    }\n    \n    // Collect fixable issues\n    var fixable []FixableIssue\n    for _, issue := range issues {\n        if fixer := fix.GetFixer(issue.CheckName); fixer \\!= nil {\n            fixable = append(fixable, FixableIssue{issue, fixer})\n        }\n    }\n    \n    if len(fixable) == 0 {\n        fmt.Println(\"No automatically fixable issues found\")\n        return\n    }\n    \n    // Show what will be fixed\n    fmt.Printf(\"Found %d fixable issues:\\n\", len(fixable))\n    for i, f := range fixable {\n        fmt.Printf(\"  %d. [%s] %s\\n\", i+1, f.Issue.CheckName, f.Fixer.Description())\n    }\n    \n    // Confirm unless --yes\n    if \\!yesFlag {\n        fmt.Print(\"\\nProceed with fixes? [Y/n] \")\n        // ... read confirmation\n    }\n    \n    // Apply fixes\n    for _, f := range fixable {\n        fmt.Printf(\"Fixing %s... \", f.Issue.CheckName)\n        if err := f.Fixer.Fix(ctx, f.Issue); err \\!= nil {\n            fmt.Printf(\"FAILED: %v\\n\", err)\n        } else {\n            fmt.Println(\"OK\")\n        }\n    }\n}\n```\n\n## Fixable Checks (Initial Set)\n\n| Check | Fixer | Action |\n|-------|-------|--------|\n| git-hooks | HooksFixer | Reinstall hooks |\n| hooks-outdated | HooksFixer | Update hooks |\n| merge-driver-missing | MergeDriverFixer | Configure merge driver |\n| sync-branch-diverged | SyncBranchFixer | Reset to remote |\n| daemon-version-mismatch | DaemonFixer | Restart daemon |\n\n## Testing\n```bash\n# Test with broken hooks\nrm .git/hooks/pre-commit\nbd doctor --fix --yes\n\n# Verify fix applied\nbd doctor  # Should pass now\n```\n\n## Success Criteria\n- --fix flag triggers automatic repair\n- User prompted for confirmation (unless --yes)\n- Clear output showing what was fixed\n- Graceful handling of fix failures\n- At least 5 common issues auto-fixable","status":"closed","priority":2,"issue_type":"feature","assignee":"beads/Doctor","created_at":"2025-11-14T18:17:48.411264-08:00","updated_at":"2025-12-23T13:34:05.646445-08:00","closed_at":"2025-12-23T13:34:05.646445-08:00","close_reason":"Feature already fully implemented. Verified: --fix, --yes, --interactive, --dry-run flags all working. 20+ fixable issues supported. Tests pass.","dependencies":[{"issue_id":"bd-ykd9","depends_on_id":"bd-iz5t","type":"parent-child","created_at":"2025-12-23T12:44:07.732505-08:00","created_by":"daemon"}]}
 {"id":"bd-ykqu","title":"Add gate timeout tracking and notification","description":"Implement timeout and notification logic for gates.\n\n## Timeout Behavior\n1. Gate created with timeout (e.g., 30m)\n2. Deacon tracks elapsed time during patrol\n3. If timeout reached:\n   - Notify all waiters: \"Gate timed out\"\n   - Close gate with timeout reason\n   - Waiter can retry, escalate, or fail gracefully\n\n## Notification\n- Use gt mail send to notify waiters\n- Include gate ID, await type, and reason in message\n- Support multiple waiters notification\n\n## Escalation Path\n- Witness sees stuck worker, nudges them\n- Worker can escalate to human if needed","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-23T11:44:40.1825-08:00","updated_at":"2025-12-23T12:19:44.362527-08:00","closed_at":"2025-12-23T12:19:44.362527-08:00","close_reason":"Moved to gastown: gt-fqcz","dependencies":[{"issue_id":"bd-ykqu","depends_on_id":"bd-udsi","type":"parent-child","created_at":"2025-12-23T11:44:53.072862-08:00","created_by":"daemon"},{"issue_id":"bd-ykqu","depends_on_id":"bd-is6m","type":"blocks","created_at":"2025-12-23T11:44:56.595085-08:00","created_by":"daemon"}]}
 {"id":"bd-ymqn","title":"Code review: bd mol bond --ref and bd activity (bd-xo1o work)","description":"Review dave's recent commits for bd-xo1o (Dynamic Molecule Bonding):\n\n## Commits to Review\n- ee04b1ea: feat: add dynamic molecule bonding with --ref flag (bd-xo1o.1)\n- be520d90: feat: add bd activity command for real-time state feed (bd-xo1o.3)\n\n## Review Focus\n1. Code quality and correctness\n2. Error handling\n3. Edge cases\n4. Test coverage\n5. Documentation\n\n## Deliverables\n- File beads for any issues found\n- Note any concerns or suggestions\n- Verify the implementation matches the bd-xo1o epic requirements","status":"closed","priority":1,"issue_type":"task","assignee":"beads/ace","created_at":"2025-12-23T03:47:55.217363-08:00","updated_at":"2025-12-23T04:11:00.226326-08:00","closed_at":"2025-12-23T04:11:00.226326-08:00","close_reason":"Code review completed by ace"}