feat(molecules): Add molecules.jsonl as separate catalog file for templates
Implements gt-0ei3: Template molecules now live in a separate molecules.jsonl file, distinct from work items in issues.jsonl. Key changes: - Add internal/molecules package for loading molecule catalogs - Implement hierarchical loading: built-in → town → user → project - Molecules use their own ID namespace (mol-*) with prefix validation skipped - Templates are marked with is_template: true and are read-only - bd list excludes templates by default (existing functionality) The hierarchical loading allows: - Built-in molecules shipped with bd binary (placeholder for future) - Town-level: ~/gt/.beads/molecules.jsonl (Gas Town) - User-level: ~/.beads/molecules.jsonl - Project-level: .beads/molecules.jsonl 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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209
internal/molecules/molecules_test.go
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209
internal/molecules/molecules_test.go
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package molecules
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import (
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"context"
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"os"
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"path/filepath"
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"testing"
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"github.com/steveyegge/beads/internal/storage/sqlite"
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"github.com/steveyegge/beads/internal/types"
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)
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func TestLoadMoleculesFromFile(t *testing.T) {
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// Create a temporary directory
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tempDir := t.TempDir()
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// Create a test molecules.jsonl file
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moleculesPath := filepath.Join(tempDir, "molecules.jsonl")
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content := `{"id":"mol-test-1","title":"Test Molecule 1","issue_type":"molecule","status":"open"}
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{"id":"mol-test-2","title":"Test Molecule 2","issue_type":"molecule","status":"open"}`
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if err := os.WriteFile(moleculesPath, []byte(content), 0600); err != nil {
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t.Fatalf("Failed to write test file: %v", err)
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}
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// Load molecules
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molecules, err := loadMoleculesFromFile(moleculesPath)
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if err != nil {
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t.Fatalf("Failed to load molecules: %v", err)
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}
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if len(molecules) != 2 {
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t.Errorf("Expected 2 molecules, got %d", len(molecules))
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}
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// Check that IsTemplate is set
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for _, mol := range molecules {
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if !mol.IsTemplate {
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t.Errorf("Molecule %s should have IsTemplate=true", mol.ID)
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}
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}
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// Check specific fields
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if molecules[0].ID != "mol-test-1" {
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t.Errorf("Expected ID 'mol-test-1', got '%s'", molecules[0].ID)
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}
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if molecules[0].Title != "Test Molecule 1" {
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t.Errorf("Expected Title 'Test Molecule 1', got '%s'", molecules[0].Title)
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}
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}
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func TestLoadMoleculesFromNonexistentFile(t *testing.T) {
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molecules, err := loadMoleculesFromFile("/nonexistent/path/molecules.jsonl")
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if err != nil {
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t.Errorf("Expected nil error for nonexistent file, got: %v", err)
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}
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if molecules != nil {
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t.Errorf("Expected nil molecules for nonexistent file, got: %v", molecules)
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}
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}
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func TestLoader_LoadAll(t *testing.T) {
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ctx := context.Background()
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// Create temporary directories
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tempDir := t.TempDir()
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beadsDir := filepath.Join(tempDir, ".beads")
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if err := os.MkdirAll(beadsDir, 0750); err != nil {
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t.Fatalf("Failed to create beads dir: %v", err)
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}
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// Create a test database
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dbPath := filepath.Join(beadsDir, "test.db")
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store, err := sqlite.New(ctx, dbPath)
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if err != nil {
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t.Fatalf("Failed to create store: %v", err)
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}
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defer store.Close()
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// Set issue prefix (required by storage)
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if err := store.SetConfig(ctx, "issue_prefix", "test"); err != nil {
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t.Fatalf("Failed to set prefix: %v", err)
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}
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// Create a project-level molecules.jsonl
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moleculesPath := filepath.Join(beadsDir, "molecules.jsonl")
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content := `{"id":"mol-feature","title":"Feature Template","issue_type":"molecule","status":"open","description":"Standard feature workflow"}
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{"id":"mol-bugfix","title":"Bugfix Template","issue_type":"molecule","status":"open","description":"Bug fix workflow"}`
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if err := os.WriteFile(moleculesPath, []byte(content), 0600); err != nil {
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t.Fatalf("Failed to write molecules file: %v", err)
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}
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// Load molecules
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loader := NewLoader(store)
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result, err := loader.LoadAll(ctx, beadsDir)
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if err != nil {
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t.Fatalf("LoadAll failed: %v", err)
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}
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if result.Loaded != 2 {
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t.Errorf("Expected 2 loaded molecules, got %d", result.Loaded)
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}
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// Verify molecules are in the database
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mol1, err := store.GetIssue(ctx, "mol-feature")
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if err != nil {
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t.Fatalf("Failed to get mol-feature: %v", err)
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}
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if mol1 == nil {
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t.Fatal("mol-feature not found in database")
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}
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if !mol1.IsTemplate {
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t.Error("mol-feature should be marked as template")
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}
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if mol1.Title != "Feature Template" {
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t.Errorf("Expected title 'Feature Template', got '%s'", mol1.Title)
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}
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mol2, err := store.GetIssue(ctx, "mol-bugfix")
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if err != nil {
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t.Fatalf("Failed to get mol-bugfix: %v", err)
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}
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if mol2 == nil {
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t.Fatal("mol-bugfix not found in database")
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}
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if !mol2.IsTemplate {
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t.Error("mol-bugfix should be marked as template")
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}
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}
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func TestLoader_SkipExistingMolecules(t *testing.T) {
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ctx := context.Background()
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// Create temporary directories
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tempDir := t.TempDir()
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beadsDir := filepath.Join(tempDir, ".beads")
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if err := os.MkdirAll(beadsDir, 0750); err != nil {
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t.Fatalf("Failed to create beads dir: %v", err)
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}
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// Create a test database
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dbPath := filepath.Join(beadsDir, "test.db")
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store, err := sqlite.New(ctx, dbPath)
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if err != nil {
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t.Fatalf("Failed to create store: %v", err)
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}
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defer store.Close()
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// Set issue prefix
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if err := store.SetConfig(ctx, "issue_prefix", "test"); err != nil {
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t.Fatalf("Failed to set prefix: %v", err)
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}
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// Pre-create a molecule in the database (skip prefix validation for mol-* IDs)
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existingMol := &types.Issue{
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ID: "mol-existing",
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Title: "Existing Molecule",
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IssueType: types.TypeMolecule,
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Status: types.StatusOpen,
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IsTemplate: true,
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}
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opts := sqlite.BatchCreateOptions{SkipPrefixValidation: true}
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if err := store.CreateIssuesWithFullOptions(ctx, []*types.Issue{existingMol}, "test", opts); err != nil {
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t.Fatalf("Failed to create existing molecule: %v", err)
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}
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// Create a molecules.jsonl with the same ID
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moleculesPath := filepath.Join(beadsDir, "molecules.jsonl")
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content := `{"id":"mol-existing","title":"Updated Molecule","issue_type":"molecule","status":"open"}
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{"id":"mol-new","title":"New Molecule","issue_type":"molecule","status":"open"}`
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if err := os.WriteFile(moleculesPath, []byte(content), 0600); err != nil {
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t.Fatalf("Failed to write molecules file: %v", err)
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}
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// Load molecules
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loader := NewLoader(store)
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result, err := loader.LoadAll(ctx, beadsDir)
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if err != nil {
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t.Fatalf("LoadAll failed: %v", err)
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}
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// Should only load the new one (existing one is skipped)
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if result.Loaded != 1 {
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t.Errorf("Expected 1 loaded molecule, got %d", result.Loaded)
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}
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// Verify the existing molecule wasn't updated
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mol, err := store.GetIssue(ctx, "mol-existing")
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if err != nil {
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t.Fatalf("Failed to get mol-existing: %v", err)
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}
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if mol.Title != "Existing Molecule" {
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t.Errorf("Expected title 'Existing Molecule' (unchanged), got '%s'", mol.Title)
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}
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}
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func TestGetBuiltinMolecules(t *testing.T) {
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molecules := getBuiltinMolecules()
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// For now, we expect no built-in molecules (can be added later)
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if molecules == nil {
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// This is expected for now
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return
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}
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// When built-in molecules are added, verify they all have IsTemplate=true
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for _, mol := range molecules {
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if !mol.IsTemplate {
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t.Errorf("Built-in molecule %s should have IsTemplate=true", mol.ID)
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}
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}
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}
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