From fafc256b333c7fee5519e4290ec5271b2fe0131f Mon Sep 17 00:00:00 2001 From: beads/crew/dave Date: Sat, 10 Jan 2026 23:21:33 -0800 Subject: [PATCH] bd sync: 2026-01-10 23:21:33 --- .beads/issues.jsonl | 34 +++++++++++++++++++++------------- 1 file changed, 21 insertions(+), 13 deletions(-) diff --git a/.beads/issues.jsonl b/.beads/issues.jsonl index 5242d7fc..cb7930b6 100644 --- a/.beads/issues.jsonl +++ b/.beads/issues.jsonl @@ -102,9 +102,11 @@ {"id":"bd-1f64","title":"Add comprehensive tests for config.yaml issue-prefix migration","description":"The GH #209 config.yaml migration lacks test coverage:\n\nMissing tests:\n- config.SetIssuePrefix() edge cases (empty file, comments, malformed YAML)\n- config.GetIssuePrefix() with various config states\n- MigrateConfigToYAML() automatic migration logic\n- bd init writing to config.yaml instead of DB\n- bd migrate DB→config.yaml migration path\n\nTest scenarios needed:\n1. SetIssuePrefix with empty config.yaml\n2. SetIssuePrefix with existing config.yaml (preserves other settings)\n3. SetIssuePrefix with commented issue-prefix line\n4. SetIssuePrefix atomic write (temp file cleanup)\n5. GetIssuePrefix fallback behavior\n6. MigrateConfigToYAML when config.yaml missing prefix but DB has it\n7. MigrateConfigToYAML when both missing (detect from issues)\n8. MigrateConfigToYAML when config.yaml already has prefix (no-op)\n9. Integration test: fresh bd init writes to config.yaml only\n10. Integration test: upgrade from v0.21 DB migrates to config.yaml\n\nPriority 1 because this is a user-facing migration affecting all users upgrading to v0.22.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-03T22:33:43.08753-08:00","updated_at":"2025-11-03T22:46:16.306565-08:00","closed_at":"2025-11-03T22:46:16.306565-08:00"} {"id":"bd-1fkr","title":"bd-hv01: Storage backend extensibility broken by type assertion","description":"Problem: deletion_tracking.go:69-82 uses type assertion for DeleteIssue which breaks if someone adds a new storage backend.\n\nFix: Check capability before starting merge or add DeleteIssue to Storage interface.\n\nFiles: cmd/bd/deletion_tracking.go:69-82, internal/storage/storage.go","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-06T18:16:20.770662-08:00","updated_at":"2025-11-06T18:55:08.666253-08:00","closed_at":"2025-11-06T18:55:08.666253-08:00","dependencies":[{"issue_id":"bd-1fkr","depends_on_id":"bd-rbxi","type":"parent-child","created_at":"2025-11-06T18:19:14.925961-08:00","created_by":"daemon"}]} {"id":"bd-1h8","title":"Fix compact --analyze/--apply error messages to clarify direct mode requirement","description":"**Problem:**\nWhen users run `bd compact --analyze` with daemon running, they get:\n```\nError: compact requires SQLite storage\n```\n\nThis is misleading because they ARE using SQLite (via daemon), but the command needs DIRECT SQLite access.\n\n**Current behavior:**\n- Error message suggests they don't have SQLite\n- No hint about using --no-daemon flag\n- Related to issue #349 item #1\n\n**Proposed fix:**\n1. Update error messages in cmd/bd/compact.go lines 106-114 (analyze) and 121-137 (apply)\n2. Add explicit hint: \"Use --no-daemon flag to bypass daemon\"\n3. Change SQLite check error from \"requires SQLite storage\" to \"failed to open database in direct mode\"\n\n**Files to modify:**\n- cmd/bd/compact.go (lines ~106-137)\n\n**Testing:**\n- Run with daemon: `bd compact --analyze` should show clear error + hint\n- Run with --no-daemon: `bd compact --analyze --no-daemon` should work\n- Verify error message is actionable","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-20T20:47:45.606924-05:00","updated_at":"2025-11-20T20:59:13.406952-05:00","closed_at":"2025-11-20T20:59:13.406952-05:00"} +{"id":"bd-1hu59","title":"Test failures: schema mismatch after owner field addition","description":"Pre-existing test failures detected during refinery patrol:\n\n1. cmd/bd: TestResolveProtoIDOrTitle - sql: expected 31 destination arguments in Scan, not 32\n2. internal/storage/sqlite: TestGetIssuesByLabel - same scan mismatch\n3. internal/storage/sqlite: TestMigrateContentHashColumn - no such column: owner\n\nRoot cause: The 'owner' field was added (ceb5769c) but tests/fixtures are not updated to match the new schema.\n\nFiles affected:\n- cmd/bd template tests\n- internal/storage/sqlite/labels_test.go\n- internal/storage/sqlite/migrations_test.go","status":"open","priority":1,"issue_type":"bug","created_at":"2026-01-10T22:00:41.275253-08:00","created_by":"beads/refinery","updated_at":"2026-01-10T22:00:41.275253-08:00"} {"id":"bd-1juu","title":"Merge: obsidian-mjxeci6l","description":"branch: polecat/obsidian-mjxeci6l\ntarget: main\nsource_issue: obsidian-mjxeci6l\nrig: beads\nagent_bead: bd-beads-polecat-obsidian","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2026-01-02T13:44:06.098083-08:00","created_by":"beads/polecats/obsidian","updated_at":"2026-01-02T17:14:50.490086-08:00","closed_at":"2026-01-02T17:14:50.490086-08:00","close_reason":"Orphaned MR - obsidian stopped (merged no-op), branch never pushed"} {"id":"bd-1ls","title":"Override test","description":"## Overview\n\n[Describe the high-level goal and scope of this epic]\n\n## Success Criteria\n\n- [ ] Criteria 1\n- [ ] Criteria 2\n- [ ] Criteria 3\n\n## Background\n\n[Provide context and motivation]\n\n## Scope\n\n**In Scope:**\n- Item 1\n- Item 2\n\n**Out of Scope:**\n- Item 1\n- Item 2\n","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-03T20:15:10.01471-08:00","updated_at":"2025-11-03T22:07:10.946574-08:00","closed_at":"2025-11-03T22:07:10.946574-08:00"} {"id":"bd-1mzt","title":"Client self-heal: remove stale pid when lock free + socket missing","description":"When client detects:\n- Socket is missing AND\n- tryDaemonLock shows lock NOT held\n\nThen automatically:\n1. Remove stale daemon.pid file\n2. Optionally auto-start daemon (behind BEADS_AUTO_START_DAEMON=1 env var)\n\nThis prevents stale artifacts from accumulating after daemon crashes.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-07T16:42:12.75205-08:00","updated_at":"2025-11-07T22:07:17.342845-08:00","closed_at":"2025-11-07T21:21:15.317562-08:00","dependencies":[{"issue_id":"bd-1mzt","depends_on_id":"bd-ndyz","type":"discovered-from","created_at":"2025-11-07T16:42:12.753099-08:00","created_by":"daemon"}]} +{"id":"bd-1p8jx","title":"Digest: mol-refinery-patrol","description":"Patrol: Queue empty, no branches processed, inbox clear","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T23:04:23.826002-08:00","updated_at":"2026-01-10T23:04:23.826002-08:00","closed_at":"2026-01-10T23:04:23.82595-08:00","close_reason":"Squashed from 11 wisps","dependencies":[{"issue_id":"bd-1p8jx","depends_on_id":"bd-wisp-da9","type":"parent-child","created_at":"2026-01-10T23:04:23.82686-08:00","created_by":"beads/refinery"}]} {"id":"bd-1pj6","title":"Proposal: Custom status states via config","description":"Proposal to add 'custom status states' via `bd config`.\nUsers could define an optional issue status enum (e.g., awaiting_review, review_in_progress) in the config.\nThis would enable multi-step pipelines to process issues where each step correlates to a specific status.\n\nExamples:\n- awaiting_verification\n- awaiting_docs\n- awaiting_testing\n","status":"closed","priority":3,"issue_type":"feature","created_at":"2025-11-20T18:55:48.670499-05:00","updated_at":"2025-12-09T18:38:37.668809171-05:00","closed_at":"2025-11-28T23:18:45.862553-08:00"} {"id":"bd-1pr6","title":"Time-dependent worktree detection tests may be flaky","status":"hooked","priority":3,"issue_type":"task","created_at":"2025-12-26T01:21:22.065353-08:00","updated_at":"2025-12-30T15:44:43.360441-08:00"} {"id":"bd-1rh","title":"cmd/bd test suite is absurdly slow - 279 tests taking 8+ minutes","description":"# Problem\n\nThe cmd/bd test suite is painfully slow:\n- **279 tests** in cmd/bd alone\n- Full suite takes **8+ minutes** to run\n- Even with the 16 slowest integration tests now tagged with `integration` build tag, the remaining tests still take forever\n\nThis makes the development loop unusable. We can't wait 8+ minutes every time we want to run tests.\n\n# Root Cause Analysis\n\n## 1. Sheer Volume\n279 tests is too many for a single package. Even at 0.1s per test, that's 28 seconds minimum just for cmd/bd.\n\n## 2. Each Test Creates Full Database + Temp Directories\nEvery test does heavy setup:\n- Creates temp directory (`t.TempDir()` or `os.MkdirTemp`)\n- Initializes SQLite database\n- Sets up git repo in many cases\n- Creates full storage layer\n\nExample from the tests:\n```go\nfunc setupCLITestDB(t *testing.T) string {\n tmpDir := createTempDirWithCleanup(t)\n runBDInProcess(t, tmpDir, \"init\", \"--prefix\", \"test\", \"--quiet\")\n return tmpDir\n}\n```\n\nThis happens 279 times!\n\n## 3. Tests Are Not Properly Categorized\nWe have three types of tests mixed together:\n- **Unit tests** - should be fast, test single functions\n- **Integration tests** - test full workflows, need DB/git\n- **End-to-end tests** - test entire CLI commands\n\nThey're all lumped together in cmd/bd, all running every time.\n\n# What We've Already Fixed\n\nAdded `integration` build tags to 16 obviously-slow test files:\n- import_profile_test.go (performance benchmarking tests)\n- export_mtime_test.go (tests with time.Sleep calls)\n- cli_fast_test.go (full CLI integration tests)\n- delete_test.go, import_uncommitted_test.go, sync_local_only_test.go (git integration)\n- And 10 more in internal/ packages\n\nThese are now excluded from the default `go test ./...` run.\n\n# Proposed Solutions\n\n## Option 1: Shared Test Fixtures (Quick Win)\nCreate a shared test database that multiple tests can use:\n```go\nvar testDB *sqlite.SQLiteStorage\nvar testDBOnce sync.Once\n\nfunc getSharedTestDB(t *testing.T) storage.Storage {\n testDBOnce.Do(func() {\n // Create one DB for all tests\n })\n return testDB\n}\n```\n\n**Pros**: Easy to implement, immediate speedup\n**Cons**: Tests become less isolated, harder to debug failures\n\n## Option 2: Table-Driven Tests (Medium Win)\nCollapse similar tests into table-driven tests:\n```go\nfunc TestCreate(t *testing.T) {\n tests := []struct{\n name string\n args []string\n want string\n }{\n {\"basic issue\", []string{\"create\", \"Test\"}, \"created\"},\n {\"with description\", []string{\"create\", \"Test\", \"-d\", \"desc\"}, \"created\"},\n // ... 50 more cases\n }\n \n db := setupOnce(t) // Setup once, not 50 times\n for _, tt := range tests {\n t.Run(tt.name, func(t *testing.T) {\n // test using shared db\n })\n }\n}\n```\n\n**Pros**: Dramatically reduces setup overhead, tests run in parallel\n**Cons**: Requires refactoring, tests share more state\n\n## Option 3: Split cmd/bd Tests Into Packages (Big Win)\nMove tests into focused packages:\n- `cmd/bd/internal/clitests` - CLI integration tests (mark with integration tag)\n- `cmd/bd/internal/unittests` - Fast unit tests\n- Keep only essential tests in cmd/bd\n\n**Pros**: Clean separation, easy to run just fast tests\n**Cons**: Requires significant refactoring\n\n## Option 4: Parallel Execution (Quick Win)\nAdd `t.Parallel()` to independent tests:\n```go\nfunc TestSomething(t *testing.T) {\n t.Parallel() // Run this test concurrently with others\n // ...\n}\n```\n\n**Pros**: Easy to add, can cut time in half on multi-core machines\n**Cons**: Doesn't reduce actual test work, just parallelizes it\n\n## Option 5: In-Memory Databases (Medium Win)\nUse `:memory:` SQLite databases instead of file-based:\n```go\nstore, err := sqlite.New(ctx, \":memory:\")\n```\n\n**Pros**: Faster than disk I/O, easier cleanup\n**Cons**: Some tests need actual file-based DBs (export/import tests)\n\n# Recommended Approach\n\n**Short-term (this week)**:\n1. Add `t.Parallel()` to all independent tests in cmd/bd\n2. Use `:memory:` databases where possible\n3. Create table-driven tests for similar test cases\n\n**Medium-term (next sprint)**:\n4. Split cmd/bd tests into focused packages\n5. Mark more integration tests appropriately\n\n**Long-term (backlog)**:\n6. Consider shared test fixtures with proper isolation\n\n# Current Status\n\nWe've tagged 16 files with `integration` build tag, but the remaining 279 tests in cmd/bd still take 8+ minutes. This issue tracks fixing the cmd/bd test performance specifically.\n\n# Target\n\nGet `go test ./...` (without `-short` or `-tags=integration`) down to **under 30 seconds**.\n\n\n# THE REAL ROOT CAUSE (Updated Analysis)\n\nAfter examining the actual test code, the problem is clear:\n\n## Every Test Creates Its Own Database From Scratch\n\nLook at `create_test.go`:\n```go\nfunc TestCreate_BasicIssue(t *testing.T) {\n tmpDir := t.TempDir() // ← Creates temp dir\n testDB := filepath.Join(tmpDir, \".beads\", \"beads.db\")\n s := newTestStore(t, testDB) // ← Opens NEW SQLite connection\n // ← Runs migrations\n // ← Sets config\n // ... actual test (3 lines)\n}\n\nfunc TestCreate_WithDescription(t *testing.T) {\n tmpDir := t.TempDir() // ← Creates ANOTHER temp dir\n testDB := filepath.Join(tmpDir, \".beads\", \"beads.db\")\n s := newTestStore(t, testDB) // ← Opens ANOTHER SQLite connection\n // ... actual test (3 lines)\n}\n```\n\n**This happens 279 times!**\n\n## These Tests Don't Need Isolation!\n\nMost tests are just checking:\n- \"Can I create an issue with a title?\"\n- \"Can I create an issue with a description?\"\n- \"Can I add labels?\"\n\nThey don't conflict with each other. They could all share ONE database!\n\n## The Fix: Test Suites with Shared Setup\n\nInstead of:\n```go\nfunc TestCreate_BasicIssue(t *testing.T) {\n s := newTestStore(t, t.TempDir()+\"/db\") // ← Expensive!\n // test\n}\n\nfunc TestCreate_WithDesc(t *testing.T) {\n s := newTestStore(t, t.TempDir()+\"/db\") // ← Expensive!\n // test\n}\n```\n\nDo this:\n```go\nfunc TestCreate(t *testing.T) {\n // ONE setup for all subtests\n s := newTestStore(t, t.TempDir()+\"/db\")\n \n t.Run(\"basic_issue\", func(t *testing.T) {\n t.Parallel() // Can run concurrently - tests don't conflict\n // test using shared `s`\n })\n \n t.Run(\"with_description\", func(t *testing.T) {\n t.Parallel()\n // test using shared `s`\n })\n \n // ... 50 more subtests, all using same DB\n}\n```\n\n**Result**: 50 tests → 1 database setup instead of 50!\n\n## Why This Works\n\nSQLite is fine with concurrent reads and isolated transactions. These tests:\n- ✅ Create different issues (no ID conflicts)\n- ✅ Just read back what they created\n- ✅ Don't depend on database state from other tests\n\nThey SHOULD share a database!\n\n## Real Numbers\n\nCurrent:\n- 279 tests × (create dir + init SQLite + migrations) = **8 minutes**\n\nAfter fix:\n- 10 test suites × (create dir + init SQLite + migrations) = **30 seconds**\n- 279 subtests running in parallel using those 10 DBs = **5 seconds**\n\n**Total: ~35 seconds instead of 8 minutes!**\n\n## Implementation Plan\n\n1. **Group related tests** into suites (Create, List, Update, Delete, etc.)\n2. **One setup per suite** instead of per test\n3. **Use t.Run() for subtests** with t.Parallel()\n4. **Keep tests that actually need isolation** separate (export/import tests, git operations)\n\nThis is way better than shuffling tests into folders!","notes":"## Progress Update (2025-11-21)\n\n✅ **Completed**:\n- Audited all 280 tests, created TEST_SUITE_AUDIT.md ([deleted:bd-c49])\n- Refactored create_test.go to shared DB pattern ([deleted:bd-y6d])\n- Proven the pattern works: 11 tests now run in 0.04s with 1 DB instead of 11\n\n❌ **Current Reality**:\n- Overall test suite: Still 8+ minutes (no meaningful change)\n- Only 1 of 76 test files refactored\n- Saved ~10 DB initializations out of 280\n\n## Acceptance Criteria (REALISTIC)\n\nThis task is NOT complete until:\n- [ ] All P1 files refactored (create ✅, dep, stale, comments, list, ready)\n- [ ] Test suite runs in \u003c 2 minutes\n- [ ] Measured and verified actual speedup\n\n## Next Steps\n\n1. Refactor remaining 5 P1 files: dep_test.go, stale_test.go, comments_test.go, list_test.go, ready_test.go\n2. Measure actual time improvement after each file\n3. Continue with P2 files if needed to hit \u003c2min target","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-21T11:37:47.886207-05:00","updated_at":"2026-01-08T20:20:48.332191-08:00","closed_at":"2026-01-08T20:20:48.332191-08:00","close_reason":"Test suite now runs in ~17 seconds (was 8+ minutes). Issue is stale - optimizations were made.","dependencies":[{"issue_id":"bd-1rh","depends_on_id":"bd-c49","type":"blocks","created_at":"2025-11-21T11:49:26.347518-05:00","created_by":"daemon"}]} @@ -272,7 +274,7 @@ {"id":"bd-46381404","title":"Test database naming","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-27T18:27:28.309676-07:00","updated_at":"2025-10-31T12:00:43.185201-07:00","closed_at":"2025-10-31T12:00:43.185201-07:00"} {"id":"bd-47qx","title":"bd cook: Proto ID prefix should match project prefix","description":"When `bd cook` creates a proto, it uses the formula name as the proto ID:\n\n```yaml\nformula: mol-deacon-patrol\n```\n\nCreates proto with ID `mol-deacon-patrol`.\n\n## Problem\n\nIf the project uses a different prefix (e.g., `gt-`), the cooked protos have \na different prefix (`mol-`), causing:\n\n1. `bd sync` import warnings about prefix mismatch\n2. Mixed prefix lists in `bd mol list`\n3. Confusion about naming conventions\n\n## Options\n\n1. **Use project prefix**: Cook as `gt-mol-deacon-patrol`\n2. **Allow mol- as special prefix**: Recognize mol-* as valid for protos\n3. **Make prefix configurable**: `bd cook --prefix gt-`\n4. **Keep current behavior**: Document that formulas use their own namespace\n\n## Current Workaround\n\nThe prefix mismatch warning can be ignored, but `bd sync` fails the import step.\n\n## Related\n\ngt-i6k1: Duplicate proto cleanup","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-12-24T13:50:24.631336-08:00","updated_at":"2025-12-24T13:59:09.933374-08:00","closed_at":"2025-12-24T13:59:09.933374-08:00"} {"id":"bd-47tn","title":"Add bd daemon --stop-all command to kill all daemon processes","description":"Currently there's no easy way to stop all running bd daemon processes. Users must resort to pkill -f 'bd daemon' or similar shell commands.\n\nAdd a --stop-all flag to bd daemon that:\n1. Finds all running bd daemon processes (not just the current repo's daemon)\n2. Gracefully stops them all\n3. Reports how many were stopped\n\nThis is useful when:\n- Multiple daemons are running and causing race conditions\n- User wants a clean slate before running bd sync\n- Debugging daemon-related issues","status":"tombstone","priority":2,"issue_type":"feature","created_at":"2025-12-13T06:34:45.080633-08:00","updated_at":"2025-12-25T01:21:01.952723-08:00","deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"feature"} -{"id":"bd-495i6","title":"Merge: topaz-mk9abkx5","description":"branch: polecat/topaz-mk9abkx5\ntarget: main\nsource_issue: topaz-mk9abkx5\nrig: beads\nagent_bead: bd-beads-polecat-topaz\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:31:31.043597-08:00","created_by":"stevey","updated_at":"2026-01-10T21:31:31.043597-08:00","labels":["gt:merge-request"]} +{"id":"bd-495i6","title":"Merge: topaz-mk9abkx5","description":"branch: polecat/topaz-mk9abkx5\ntarget: main\nsource_issue: topaz-mk9abkx5\nrig: beads\nagent_bead: bd-beads-polecat-topaz\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:31:31.043597-08:00","created_by":"stevey","updated_at":"2026-01-10T21:53:13.173233-08:00","closed_at":"2026-01-10T21:53:13.173233-08:00","close_reason":"Branch no longer exists on remote","labels":["gt:merge-request"]} {"id":"bd-49kw","title":"Workaround for FastMCP outputSchema bug in Claude Code","description":"The beads MCP server (v0.23.1) successfully connects to Claude Code, but all tools fail to load with a schema validation error due to a bug in FastMCP 2.13.1.\n\nError: \"Invalid literal value, expected \\\"object\\\"\" in outputSchema.\n\nRoot Cause: FastMCP generates outputSchema with $ref at root level without \"type\": \"object\" for self-referential models (Issue).\n\nWorkaround: Use slash commands (/beads:ready) or wait for FastMCP fix.\n","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-20T18:55:39.041831-05:00","updated_at":"2025-12-23T23:49:44.371623-08:00","closed_at":"2025-12-23T23:49:44.371623-08:00"} {"id":"bd-49oe","title":"Cache GetGitDir() for additional optimization","description":"Code review finding from bd-7di fix.\n\nGetGitDir() at line 17 is not cached but is called by:\n- GetGitHooksDir()\n- GetGitRefsDir()\n- GetGitHeadPath()\n\nIf any of those are called multiple times, we still spawn extra git processes. Consider adding sync.Once caching similar to the other functions.\n\nFile: internal/git/gitdir.go","status":"closed","priority":4,"issue_type":"task","created_at":"2025-12-25T22:08:52.736529-08:00","updated_at":"2026-01-04T15:22:08.706244-08:00","closed_at":"2025-12-30T22:14:16.659122-08:00","close_reason":"Already implemented. GetGitDir() uses getGitContext() which is cached via sync.Once. The gitContext struct (line 13-19) holds gitDir and is populated once by initGitContext(). All dependent functions (GetGitHooksDir, GetGitRefsDir, GetGitHeadPath) benefit from this caching. No changes needed."} {"id":"bd-4aao","title":"Fix failing integration tests in beads-mcp","description":"The `beads-mcp` test suite has failures in `tests/test_bd_client_integration.py` (assertion error in `test_init_creates_beads_directory`) and errors in `tests/test_worktree_separate_dbs.py` (setup failures finding database). These need to be investigated and fixed to ensure a reliable CI baseline.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-20T18:53:28.4803-05:00","updated_at":"2025-12-09T18:38:37.676638171-05:00","closed_at":"2025-11-25T21:39:20.967106-08:00"} @@ -329,6 +331,7 @@ {"id":"bd-4yb9","title":"Add tests for IDPrefix filter optimization","description":"Commit 5dfb838d added IDPrefix field to IssueFilter for efficient prefix filtering but lacks tests.\n\nIDPrefix enables database-level filtering of issue IDs by prefix, improving\nshell completion performance by avoiding fetching all issues.\n\nTest cases needed:\n- ListIssues with IDPrefix returns only matching issues\n- IDPrefix filtering works in sqlite store\n- IDPrefix filtering works in transaction store\n- IDPrefix filtering works in memory store\n- Empty IDPrefix returns all issues\n- IDPrefix combined with other filters\n\nLocation: internal/types/types.go (IssueFilter), internal/storage/sqlite/queries.go\nSuggested test files: internal/storage/sqlite/sqlite_test.go, internal/storage/storage_test.go","status":"open","priority":3,"issue_type":"task","created_at":"2026-01-07T01:18:14.705475-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-07T01:18:14.705475-08:00"} {"id":"bd-5012","title":"Merge: ux-1766978911613","description":"branch: polecat/Nux-1766978911613\ntarget: main\nsource_issue: ux-1766978911613\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-28T19:35:42.938017-08:00","created_by":"beads/polecats/Nux","updated_at":"2025-12-29T13:40:29.719953-08:00","closed_at":"2025-12-29T13:40:29.719953-08:00","close_reason":"Stale/spurious - test artifacts, merged PRs, or auto-close candidates"} {"id":"bd-502e","title":"Add comprehensive tests for sync branch daemon logic","description":"The daemon sync branch functionality (bd-6545) was implemented but needs proper end-to-end testing.\n\nCurrent implementation:\n- daemon_sync_branch.go has syncBranchCommitAndPush() and syncBranchPull()\n- daemon_sync.go has been updated to use these functions when sync.branch is configured\n- All daemon tests pass, but no specific tests for sync branch behavior\n\nTesting needed:\n- Test that daemon commits to sync branch when sync.branch is configured\n- Test that daemon commits to current branch when sync.branch is NOT configured (backward compatibility)\n- Test that daemon pulls from sync branch and syncs JSONL back to main repo\n- Test worktree creation and health checks during daemon operations\n- Test error handling (missing branch, worktree corruption, etc.)\n\nKey challenge: Tests need to run in the context of the git repo (getGitRoot() uses current working directory), so test setup needs to properly change directory or mock the git root detection.\n\nReference existing daemon tests in daemon_test.go and daemon_autoimport_test.go for patterns.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T15:59:13.341491-08:00","updated_at":"2025-11-02T16:39:53.278313-08:00","closed_at":"2025-11-02T16:39:53.278313-08:00","dependencies":[{"issue_id":"bd-502e","depends_on_id":"bd-6545","type":"parent-child","created_at":"2025-11-02T15:59:13.342331-08:00","created_by":"daemon"}]} +{"id":"bd-502gs","title":"Fix orphaned test references: TypeRig, IsBuiltIn, parseCommaSeparated","description":"Pre-existing build failures found during refinery patrol:\n\n**Files with errors:**\n- internal/types/types_test.go:553: undefined: TypeRig\n- internal/types/types_test.go:591: undefined: TypeRig \n- internal/types/types_test.go:603: tt.issueType.IsBuiltIn undefined\n- internal/storage/sqlite/validators_test.go:208: undefined: parseCommaSeparated\n\n**Root cause:**\nProduction code removed these symbols but tests weren't updated:\n- TypeRig constant removed from types.go\n- IsBuiltIn() method removed from IssueType\n- parseCommaSeparated() removed from validators.go\n\n**Impact:**\n- go test ./... fails to compile\n- Tests cannot run until fixed\n\n**Fix:**\nRemove orphaned test code that references deleted production symbols.","status":"open","priority":1,"issue_type":"bug","created_at":"2026-01-10T21:43:12.764001-08:00","created_by":"beads/refinery","updated_at":"2026-01-10T21:43:12.764001-08:00"} {"id":"bd-512v","title":"Verify release artifacts","description":"Check GitHub releases page - binaries for darwin/linux/windows should be available","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-21T13:52:33.067124-08:00","updated_at":"2025-12-21T13:53:49.35495-08:00","deleted_at":"2025-12-21T13:53:49.35495-08:00","deleted_by":"stevey","delete_reason":"manual delete","original_type":"task"} {"id":"bd-51521","title":"Session ended: gt-beads-crew-emma","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-08T20:24:53.957149-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T20:24:53.991009-08:00","closed_at":"2026-01-08T20:24:53.991009-08:00","close_reason":"auto-closed session event"} {"id":"bd-51jl","title":"Feature P1","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-07T19:04:24.852171-08:00","updated_at":"2025-11-07T22:07:17.343481-08:00","closed_at":"2025-11-07T21:55:09.426728-08:00"} @@ -381,7 +384,7 @@ {"id":"bd-5v32e","title":"No ref test","status":"open","priority":1,"issue_type":"task","created_at":"2026-01-10T20:36:05.678546-08:00","created_by":"beads/crew/dave","updated_at":"2026-01-10T20:36:05.678546-08:00"} {"id":"bd-5x0j","title":"bd swarm status command","description":"Add bd swarm status to show swarm state derived from beads.\n\n## Context\nThis is the key command that demonstrates 'discovery over tracking'. \nSwarm status is COMPUTED from:\n- Epic children statuses\n- Dependency structure\n- Issue assignments\n\nNOT stored separately. If beads changes, status changes.\n\n## Implementation\n1. New command: bd swarm status \u003cswarm-mol-id\u003e\n2. Find linked epic from swarm molecule\n3. Query all children of epic\n4. Compute and display:\n - Ready front (unblocked, open issues)\n - In progress (in_progress status)\n - Completed (closed)\n - Blocked (has unmet dependencies)\n - Progress percentage\n - Coordinator\n - Estimated remaining (based on avg session time)\n\n## Output Format\nReady Front Analysis: gt-epic-xxx\n\nCompleted: ✓ gt-001 (2h ago)\nActive: ⟳ gt-002 [nux], ⟳ gt-003 [toast]\nReady: ○ gt-004, ○ gt-005\nBlocked: ◌ gt-006 (needs 004, 005)\n\nProgress: 1/6 complete, 2/6 active (17%)\n\n## Reference\n~/gt/docs/swarm-architecture.md - 'Ready Front Visualization'\n\n## Acceptance\n- bd swarm status \u003cmol\u003e shows accurate state\n- State reflects current beads (not cached)\n- --json output for programmatic use","status":"closed","priority":1,"issue_type":"task","created_at":"2025-12-28T19:11:36.594118-08:00","created_by":"mayor","updated_at":"2025-12-28T21:28:21.976756-08:00","closed_at":"2025-12-28T21:28:21.976756-08:00","dependencies":[{"issue_id":"bd-5x0j","depends_on_id":"bd-oxgi","type":"blocks","created_at":"2025-12-28T19:11:52.464245-08:00","created_by":"daemon"}]} {"id":"bd-5xt","title":"Log errors from timer-triggered flushes instead of discarding","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-20T21:22:06.694953-05:00","updated_at":"2025-11-20T21:35:53.117434-05:00","closed_at":"2025-11-20T21:35:53.117434-05:00"} -{"id":"bd-600yu","title":"Merge: quartz-lmqhe","description":"branch: polecat/quartz-lmqhe\ntarget: main\nsource_issue: quartz-lmqhe\nrig: beads\nagent_bead: bd-beads-polecat-quartz\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:26:06.954058-08:00","created_by":"stevey","updated_at":"2026-01-10T21:26:06.954058-08:00","labels":["gt:merge-request"]} +{"id":"bd-600yu","title":"Merge: quartz-lmqhe","description":"branch: polecat/quartz-lmqhe\ntarget: main\nsource_issue: quartz-lmqhe\nrig: beads\nagent_bead: bd-beads-polecat-quartz\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:26:06.954058-08:00","created_by":"stevey","updated_at":"2026-01-10T22:12:08.876703-08:00","closed_at":"2026-01-10T22:12:08.876703-08:00","close_reason":"merged","labels":["gt:merge-request"]} {"id":"bd-6049","title":"bd doctor --json flag not working","description":"The --json flag on bd doctor command doesn't produce JSON output. It continues to show human-readable output instead. The flag is registered locally on doctorCmd but the code uses the global jsonOutput variable set by PersistentPreRun. Need to investigate why the flag isn't being honored.","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-11-02T17:08:18.170428-08:00","updated_at":"2025-11-02T18:41:01.376783-08:00","closed_at":"2025-11-02T18:41:01.376786-08:00"} {"id":"bd-615z","title":"Add ValidateTemplate() function","description":"Add internal/validation package with ValidateTemplate(issueType, description) that checks for missing sections and returns actionable errors.","status":"closed","priority":3,"issue_type":"task","created_at":"2026-01-01T11:19:07.136885-08:00","created_by":"beads/crew/grip","updated_at":"2026-01-01T12:42:26.397143-08:00","closed_at":"2026-01-01T12:42:26.397143-08:00","close_reason":"Implemented ValidateTemplate() and LintIssue() with tests","dependencies":[{"issue_id":"bd-615z","depends_on_id":"bd-ou35","type":"parent-child","created_at":"2026-01-01T11:19:22.71669-08:00","created_by":"beads/crew/grip"},{"issue_id":"bd-615z","depends_on_id":"bd-v2mr","type":"blocks","created_at":"2026-01-01T11:19:23.924134-08:00","created_by":"beads/crew/grip"}]} {"id":"bd-6214875c","title":"Split internal/rpc/server.go into focused modules","description":"The file `internal/rpc/server.go` is 2,273 lines with 50+ methods, making it difficult to navigate and prone to merge conflicts. Split into 8 focused files with clear responsibilities.\n\nCurrent structure: Single 2,273-line file with:\n- Connection handling\n- Request routing\n- All 40+ RPC method implementations\n- Storage caching\n- Health checks \u0026 metrics\n- Cleanup loops\n\nTarget structure:\n```\ninternal/rpc/\n├── server.go # Core server, connection handling (~300 lines)\n├── methods_issue.go # Issue operations (~400 lines)\n├── methods_deps.go # Dependency operations (~200 lines)\n├── methods_labels.go # Label operations (~150 lines)\n├── methods_ready.go # Ready work queries (~150 lines)\n├── methods_compact.go # Compaction operations (~200 lines)\n├── methods_comments.go # Comment operations (~150 lines)\n├── storage_cache.go # Storage caching logic (~300 lines)\n└── health.go # Health \u0026 metrics (~200 lines)\n```\n\nMigration strategy:\n1. Create new files with appropriate methods\n2. Keep `server.go` as main file with core server logic\n3. Test incrementally after each file split\n4. Final verification with full test suite","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-28T14:21:37.51524-07:00","updated_at":"2025-10-30T17:12:58.2179-07:00","closed_at":"2025-10-28T14:11:04.399811-07:00"} @@ -585,7 +588,7 @@ {"id":"bd-8zbo","title":"Code smell: runCook function is ~275 lines","description":"attached_args: Refactor runCook function (~275 lines)\n\nThe runCook() function in cmd/bd/cook.go (lines 83-357) is ~275 lines handling:\n\n1. Flag parsing and validation\n2. Mode determination (compile vs runtime)\n3. Formula parsing and resolution\n4. Control flow, advice, and expansion application\n5. Dry-run output\n6. Ephemeral mode JSON output\n7. Persist mode database operations\n8. Result display\n\nConsider extracting:\n- parseAndValidateFlags() - flag handling\n- loadAndResolveFormula() - parse, resolve, apply transformations\n- outputDryRun() - dry run display logic\n- outputEphemeral() - ephemeral JSON output\n- persistFormula() - database persistence logic\n\nThe function has multiple exit points and nested conditionals that make it hard to follow.\n\nLocation: cmd/bd/cook.go:83-357","status":"closed","priority":3,"issue_type":"chore","created_at":"2025-12-28T15:33:08.808191-08:00","created_by":"beads/crew/dave","updated_at":"2025-12-28T16:37:29.397832-08:00","closed_at":"2025-12-28T16:37:29.397832-08:00","dependencies":[{"issue_id":"bd-8zbo","depends_on_id":"bd-784c","type":"parent-child","created_at":"2025-12-28T15:38:04.25998-08:00","created_by":"daemon"}]} {"id":"bd-8zf2","title":"MCP server loses workspace context after Amp restart - causes silent failures","description":"**CRITICAL BUG**: The beads MCP server loses workspace context when Amp restarts, leading to silent failures and potential data corruption.\n\n## Reproduction\n1. Start Amp with beads MCP server configured\n2. Call `mcp__beads__set_context(workspace_root=\"/path/to/project\")`\n3. Use MCP tools successfully (e.g., `mcp__beads__show`, `mcp__beads__list`)\n4. Restart Amp (new thread/session)\n5. Try to use MCP tools without calling `set_context` again\n6. **Result**: \"Not connected\" or \"No workspace set\" errors\n\n## Impact\n- Amp agents silently fail when trying to read/update beads issues\n- May attempt to create duplicate issues because they can't see existing ones\n- Potential for data corruption if operating on wrong database\n- Breaks multi-session workflows\n- Creates confusion: CLI works (`./bd`) but MCP tools don't\n\n## Current Workaround\nManually call `mcp__beads__set_context()` at start of every Amp session.\n\n## Root Cause\nMCP server is stateful and doesn't persist workspace context across restarts.\n\n## Proposed Fix\n**Option 1 (Best)**: Auto-detect workspace from current working directory\n- Match behavior of CLI `./bd` commands\n- Check for `.beads/` directory in current dir or parents\n- No manual context setting needed\n\n**Option 2**: Persist context in MCP server state file\n- Save last workspace_root to `~/.config/beads/mcp_context.json`\n- Restore on server startup\n\n**Option 3**: Require explicit context in every MCP call\n- Add optional `workspace_root` parameter to all MCP tools\n- Fall back to saved context if not provided\n\nAcceptance:\n- MCP tools work across Amp restarts without manual set_context()\n- Auto-detection matches CLI behavior (walks up from CWD)\n- Clear error message when no workspace found\n- set_context() still works for explicit override\n- BEADS_WORKING_DIR env var support\n- Integration test validates restart behavior","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-07T23:50:52.083111-08:00","updated_at":"2025-11-07T23:58:44.397502-08:00","closed_at":"2025-11-07T23:58:44.397502-08:00"} {"id":"bd-8zpg","title":"Add tests for bd init --contributor wizard","description":"Write integration tests for the contributor wizard:\n- Test fork detection logic\n- Test planning repo creation\n- Test config setup\n- Test with/without upstream remote\n- Test with SSH vs HTTPS origins","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-05T18:58:18.171851-08:00","updated_at":"2025-11-06T18:19:16.232739-08:00","closed_at":"2025-11-06T16:14:06.341689-08:00"} -{"id":"bd-9063acda","title":"Clean up linter errors (914 total issues)","description":"The codebase has 914 linter issues reported by golangci-lint. While many are documented as baseline in LINTING.md, we should clean these up systematically to improve code quality and maintainability.","notes":"Reduced from 56 to 41 issues locally, then to 0 issues.\n\n**Fixed in commits:**\n- c2c7eda: Fixed 15 actual errors (dupl, gosec, revive, staticcheck, unparam)\n- 963181d: Configured exclusions to get to 0 issues locally\n\n**Current status:**\n- ✅ Local: golangci-lint reports 0 issues\n- ❌ CI: Still failing (see [deleted:bd-cb64c226.1])\n\n**Problem:**\nConfig v2 format or golangci-lint-action@v8 compatibility issue causing CI to fail despite local success.\n\n**Next:** Debug [deleted:bd-cb64c226.1] to fix CI/local discrepancy","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-10-24T01:01:12.997982-07:00","updated_at":"2025-12-14T12:12:46.564464-08:00","closed_at":"2025-11-04T11:10:23.532433-08:00"} +{"id":"bd-9063acda","title":"Clean up linter errors (914 total issues)","description":"dispatched_by: beads/crew/emma\n\nThe codebase has 914 linter issues reported by golangci-lint. While many are documented as baseline in LINTING.md, we should clean these up systematically to improve code quality and maintainability.","notes":"Fixed 2 unparam linter errors causing CI failure:\n- multirepo.go: Changed discoverChildTypes to return []string (error was always nil)\n- socket_path.go: Changed tmpDir from function to const (always returned /tmp)\n\nCommit: 40ae5987 - fix(lint): resolve unparam warnings in doctor and rpc packages\nCI: https://github.com/steveyegge/beads/actions/runs/20891375647 (all green)","status":"closed","priority":2,"issue_type":"epic","assignee":"beads/crew/dave","created_at":"2025-10-24T01:01:12.997982-07:00","updated_at":"2026-01-10T23:21:04.682474-08:00","closed_at":"2026-01-10T23:21:04.682474-08:00","close_reason":"Closed"} {"id":"bd-908z","title":"Add bd hooks install command to embed git hooks in binary","description":"Currently git hooks are installed via `examples/git-hooks/install.sh`, which only exists in the beads source repo. Users who install bd via installer/homebrew/npm can't easily install hooks.\n\n**Proposal:**\nAdd `bd hooks install` command that:\n- Embeds hook scripts in the bd binary (using go:embed)\n- Installs them to .git/hooks/ in current repo\n- Backs up existing hooks\n- Makes them executable\n\n**Commands:**\n- `bd hooks install` - Install all hooks\n- `bd hooks uninstall` - Remove hooks\n- `bd hooks list` - Show installed hooks status\n\n**Benefits:**\n- Works for all bd users, not just source repo users\n- More discoverable (shows in bd --help)\n- Consistent with bd workflow\n- Can version hooks with bd releases","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-08T01:23:24.362827-08:00","updated_at":"2025-11-08T01:28:08.842516-08:00","closed_at":"2025-11-08T01:28:08.842516-08:00"} {"id":"bd-90a5","title":"Extract hash ID generation functions to hash_ids.go","description":"Move generateHashID, getNextChildNumber, GetNextChildID to hash_ids.go","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T19:28:54.890883-07:00","updated_at":"2025-11-02T12:32:00.159056-08:00","closed_at":"2025-11-02T12:32:00.159058-08:00"} {"id":"bd-90fs","title":"Merge: amber-1767138546434","description":"branch: polecat/amber-1767138546434\ntarget: main\nsource_issue: amber-1767138546434\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-30T15:57:38.681293-08:00","created_by":"beads/polecats/amber","updated_at":"2025-12-30T18:12:30.966277-08:00","closed_at":"2025-12-30T18:11:08.005131-08:00"} @@ -736,11 +739,11 @@ {"id":"bd-bdc9","title":"Update Homebrew formula","description":"Update the Homebrew tap with new version:\n\n```bash\n./scripts/update-homebrew.sh 0.33.2\n```\n\nThis script waits for GitHub Actions to complete (~5 min), then updates the formula with new SHA256 hashes.","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-21T16:10:13.762399-08:00","updated_at":"2025-12-21T17:29:31.791368-08:00","deleted_at":"2025-12-21T17:29:31.791368-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"} {"id":"bd-bdhn","title":"bd message: Add input validation for --importance flag","description":"The --importance flag accepts any string without validation, leading to confusing server errors.\n\n**Location:** cmd/bd/message.go:256-258\n\n**Fix:**\n- Add flag validation for: low, normal, high, urgent\n- Add shell completion support\n- Validate in runMessageSend before sending\n\n**Impact:** Better UX, prevents confusing errors","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-08T12:54:26.43027-08:00","updated_at":"2025-11-08T12:57:59.65367-08:00","closed_at":"2025-11-08T12:57:59.65367-08:00","dependencies":[{"issue_id":"bd-bdhn","depends_on_id":"bd-6uix","type":"parent-child","created_at":"2025-11-08T12:55:54.910841-08:00","created_by":"daemon"}]} {"id":"bd-be7a","title":"Create npm package structure with package.json","description":"Set up initial npm package structure for @beads/bd:\n\n## Files to create\n- npm/package.json - Package metadata, dependencies, scripts\n- npm/bin/bd - CLI wrapper script that invokes native binary\n- npm/.gitignore - Ignore downloaded binaries\n- npm/README.md - Installation and usage instructions\n\n## package.json structure\n- Name: @beads/bd (scoped package)\n- Main: index.js (exports binary path)\n- Bin: bin/bd (CLI entry point)\n- Scripts: postinstall (download binary)\n- Keywords: issue-tracker, cli, beads, bd\n- License: MIT\n\n## Bin wrapper\nSimple Node.js script that:\n- Spawns native binary with child_process.spawn\n- Passes through all arguments and stdio\n- Exits with binary's exit code","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T23:39:47.416779-08:00","updated_at":"2025-11-03T10:31:45.381258-08:00","closed_at":"2025-11-03T10:31:45.381258-08:00","dependencies":[{"issue_id":"bd-be7a","depends_on_id":"bd-febc","type":"parent-child","created_at":"2025-11-02T23:40:32.923859-08:00","created_by":"daemon"}]} -{"id":"bd-beads-crew-dave","title":"Crew worker dave in beads - human-managed persistent workspace.","description":"Crew worker dave in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null","status":"open","priority":2,"issue_type":"agent","created_at":"2025-12-30T23:14:04.538389-08:00","created_by":"deacon","updated_at":"2026-01-10T19:29:38.002986-08:00"} +{"id":"bd-beads-crew-dave","title":"Crew worker dave in beads - human-managed persistent workspace.","description":"Crew worker dave in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null","status":"open","priority":2,"issue_type":"agent","created_at":"2025-12-30T23:14:04.538389-08:00","created_by":"deacon","updated_at":"2026-01-10T23:21:26.698569-08:00"} {"id":"bd-beads-crew-emma","title":"Crew worker emma in beads - human-managed persistent workspace.","description":"Crew worker emma in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null","status":"open","priority":2,"issue_type":"agent","created_at":"2025-12-30T23:14:04.604042-08:00","created_by":"deacon","updated_at":"2026-01-06T23:51:55.013518-08:00"} {"id":"bd-beads-crew-fang","title":"Crew worker fang in beads - human-managed persistent workspace.","description":"Crew worker fang in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null","status":"open","priority":2,"issue_type":"agent","created_at":"2025-12-30T23:14:04.672037-08:00","created_by":"deacon","updated_at":"2026-01-10T19:33:33.065077-08:00"} {"id":"bd-beads-crew-giles","title":"Crew worker giles in beads - human-managed persistent workspace.","description":"Crew worker giles in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null\nactive_mr: null\nnotification_level: null","status":"open","priority":2,"issue_type":"agent","created_at":"2026-01-04T11:22:11.009942-08:00","created_by":"mayor","updated_at":"2026-01-10T19:39:44.455704-08:00"} -{"id":"bd-beads-crew-grip","title":"Crew worker grip in beads - human-managed persistent workspace.","description":"Crew worker grip in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null","status":"open","priority":2,"issue_type":"agent","created_at":"2025-12-30T23:14:04.739788-08:00","created_by":"deacon","updated_at":"2026-01-10T19:27:29.911372-08:00"} +{"id":"bd-beads-crew-grip","title":"Crew worker grip in beads - human-managed persistent workspace.","description":"Crew worker grip in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null","status":"open","priority":2,"issue_type":"agent","created_at":"2025-12-30T23:14:04.739788-08:00","created_by":"deacon","updated_at":"2026-01-10T23:19:27.444724-08:00"} {"id":"bd-beads-crew-testcrew456","title":"Crew worker testcrew456 in beads - human-managed persistent workspace.","description":"Crew worker testcrew456 in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: hq-crew-role\ncleanup_status: null\nactive_mr: null\nnotification_level: null","status":"open","priority":2,"issue_type":"agent","created_at":"2026-01-09T22:03:44.377795-08:00","created_by":"deacon","updated_at":"2026-01-09T22:03:44.639847-08:00"} {"id":"bd-beads-crew-wolf","title":"Crew worker wolf in beads - human-managed persistent workspace.","description":"Crew worker wolf in beads - human-managed persistent workspace.\n\nrole_type: crew\nrig: beads\nagent_state: idle\nhook_bead: null\nrole_bead: gt-crew-role\ncleanup_status: null","status":"open","priority":2,"issue_type":"agent","created_at":"2025-12-30T23:14:04.805884-08:00","created_by":"deacon","updated_at":"2026-01-10T19:25:48.821469-08:00"} {"id":"bd-beads-polecat-amber","title":"bd-beads-polecat-amber","description":"bd-beads-polecat-amber\n\nrole_type: polecat\nrig: beads\nagent_state: spawning\nhook_bead: bd-uuo9\nrole_bead: hq-polecat-role\ncleanup_status: has_stash\nactive_mr: bd-3mky\nnotification_level: null","status":"closed","priority":2,"issue_type":"agent","created_at":"2026-01-04T16:17:26.278115-08:00","created_by":"mayor","updated_at":"2026-01-10T16:38:00.102831-08:00","closed_at":"2026-01-05T19:45:45.481449-08:00","close_reason":"Polecat cleaned up","labels":["gt:agent"]} @@ -789,7 +792,7 @@ {"id":"bd-bxqv","title":"Update documentation for CLI consolidation","description":"## Task\nUpdate all documentation to reflect CLI consolidation changes.\n\n## Files requiring updates\n\n### Primary docs\n- docs/CLI_REFERENCE.md - Major updates\n - Add admin section (cleanup, compact, reset)\n - Update migrate section (subcommands)\n - Update formula section (add cook)\n - Remove/update standalone command references\n\n### Secondary docs \n- docs/DELETIONS.md - migrate-tombstones → migrate tombstones, compact → admin compact\n- docs/FAQ.md - compact → admin compact\n- docs/QUICKSTART.md - compact, cleanup → admin compact, admin cleanup\n- docs/TROUBLESHOOTING.md - compact → admin compact\n- docs/CONFIG.md - compact → admin compact\n- docs/INSTALLING.md - quickstart reference\n- docs/EXTENDING.md - quickstart reference\n\n### Skills docs\n- skills/beads/SKILL.md - compact, quickstart references\n- skills/beads/references/CLI_REFERENCE.md - mirror main CLI_REFERENCE.md\n\n### Other docs\n- commands/quickstart.md - update or remove\n- commands/compact.md - update to admin compact\n- examples/compaction/README.md - update examples\n- README.md - quickstart reference\n- CHANGELOG.md - add consolidation changes section\n\n## Implementation notes\n- Keep backwards compatibility notices where aliases exist\n- Update command examples to use new paths\n- Consider adding deprecation warnings section\n","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-27T15:11:33.307408-08:00","created_by":"mayor","updated_at":"2025-12-27T16:19:36.155138-08:00","closed_at":"2025-12-27T16:19:36.155138-08:00","dependencies":[{"issue_id":"bd-bxqv","depends_on_id":"bd-w3z7","type":"blocks","created_at":"2025-12-27T15:11:52.445529-08:00","created_by":"daemon"},{"issue_id":"bd-bxqv","depends_on_id":"bd-do8e","type":"blocks","created_at":"2025-12-27T15:11:52.475688-08:00","created_by":"daemon"},{"issue_id":"bd-bxqv","depends_on_id":"bd-3u8m","type":"blocks","created_at":"2025-12-27T15:11:52.504528-08:00","created_by":"daemon"},{"issue_id":"bd-bxqv","depends_on_id":"bd-kff0","type":"blocks","created_at":"2025-12-27T15:11:52.533506-08:00","created_by":"daemon"}]} {"id":"bd-by0d","title":"Work on beads-ldv: Fix bd graph crashes with nil pointer ...","description":"Work on beads-ldv: Fix bd graph crashes with nil pointer dereference (GH#657). Fix nil pointer in computeDependencyCounts at graph.go:428. When done, submit MR (not PR) to integration branch for Refinery.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-19T22:55:27.829359-08:00","updated_at":"2025-12-19T23:28:32.428314-08:00","closed_at":"2025-12-19T23:20:49.038441-08:00"} {"id":"bd-by3x","title":"Windows binaries lack SQLite support (GH #253)","description":"Windows users installing via install.ps1 get \"sql: unknown driver sqlite\" error. Root cause: GoReleaser was building with CGO_ENABLED=0, which excludes SQLite driver.\n\nFixed by:\n1. Enabling CGO in .goreleaser.yml\n2. Installing MinGW cross-compiler in release workflow\n3. Splitting builds per platform to set correct CC for Windows\n\nNeeds new release to fix for users.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-07T15:54:13.134815-08:00","updated_at":"2025-11-07T15:55:07.024156-08:00","closed_at":"2025-11-07T15:55:07.024156-08:00"} -{"id":"bd-bz1g7","title":"Merge: onyx-mk9abhg7","description":"branch: polecat/onyx-mk9abhg7\ntarget: main\nsource_issue: onyx-mk9abhg7\nrig: beads\nagent_bead: bd-beads-polecat-onyx\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:30:34.094253-08:00","created_by":"stevey","updated_at":"2026-01-10T21:30:34.094253-08:00","labels":["gt:merge-request"]} +{"id":"bd-bz1g7","title":"Merge: onyx-mk9abhg7","description":"branch: polecat/onyx-mk9abhg7\ntarget: main\nsource_issue: onyx-mk9abhg7\nrig: beads\nagent_bead: bd-beads-polecat-onyx\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:30:34.094253-08:00","created_by":"stevey","updated_at":"2026-01-10T21:53:12.353742-08:00","closed_at":"2026-01-10T21:53:12.353742-08:00","close_reason":"Branch no longer exists on remote","labels":["gt:merge-request"]} {"id":"bd-bz3gz","title":"Session ended: gt-beads-crew-emma","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-09T00:58:49.390425-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-09T00:58:49.4254-08:00","closed_at":"2026-01-09T00:58:49.4254-08:00","close_reason":"auto-closed session event"} {"id":"bd-bzfy","title":"Integrate beads-merge tool by @neongreen","description":"**Context**: @neongreen built a production-ready 3-way merge tool for JSONL files that works with both Git and Jujutsu. This is superior to our planned bd resolve-conflicts because it prevents conflicts proactively instead of resolving them after the fact.\n\n**Tool**: https://github.com/neongreen/mono/tree/main/beads-merge\n\n**What it does**:\n- 3-way merge of JSONL files (base, left, right)\n- Field-level merging (titles, status, priority, etc.)\n- Smart dependency merging (union + dedup)\n- Conflict markers for unresolvable conflicts\n- Exit code 1 for conflicts (standard)\n\n**Integration options**:\n\n1. **Recommend (minimal effort)** - Document in AGENTS.md + TROUBLESHOOTING.md\n2. **Bundle binary** - Include in releases (cross-platform builds)\n3. **Port to Go** - Reimplement in bd codebase\n4. **Auto-install hook** - During bd init, offer to install merge driver\n\n**Recommendation**: Start with option 1 (document), then option 2 (bundle) once proven.\n\n**Related**: bd-5f483051 (bd resolve-conflicts - can close as superseded)","notes":"Created GitHub issue to discuss integration approach with @neongreen: https://github.com/neongreen/mono/issues/240\n\nAwaiting their preference on:\n1. Vendor with attribution (fastest)\n2. Extract as importable module (best long-term)\n3. Keep as separate tool (current state)\n\nNext: Wait for response before proceeding with integration.\n\nUPDATE 2025-11-06: @neongreen gave permission to vendor! Quote: \"I switched from beads to my own thing (tk) so I'm very happy to give beads-merge away — feel free to move it into the beads repo and I will point mono's readme to beads\"\n\nNext: Vendor beads-merge with full attribution","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-05T11:31:44.906652-08:00","updated_at":"2025-11-06T18:19:16.233387-08:00","closed_at":"2025-11-06T15:38:37.052274-08:00"} {"id":"bd-c01f","title":"Implement bd stale command to find abandoned/forgotten issues","description":"Add bd stale command to surface issues that haven't been updated recently and may need attention.\n\nUse cases:\n- In-progress issues with no recent activity (may be abandoned)\n- Open issues that have been forgotten\n- Issues that might be outdated or no longer relevant\n\nQuery logic should find non-closed issues where updated_at exceeds a time threshold.\n\nShould support:\n- --days N flag (default 30-90 days)\n- --status filter (e.g., only in_progress)\n- --json output for automation\n\nReferences GitHub issue #184 where user expected this command to exist.","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-10-31T22:48:46.85435-07:00","updated_at":"2025-10-31T22:54:33.704492-07:00","closed_at":"2025-10-31T22:54:33.704492-07:00"} @@ -1041,7 +1044,7 @@ {"id":"bd-fl9xb","title":"Review PR #960: Fix filepath.Rel sync error","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #960 (steveyegge/beads)\n\nPR: https://github.com/steveyegge/beads/pull/960\nAuthor: peterkc\nFixes: #959\n\nFixes bd sync failing with filepath.Rel error when dbPath is relative.\n- gh pr view 960 --repo steveyegge/beads\n- gh pr diff 960 --repo steveyegge/beads\n- If good: gh pr merge 960 --repo steveyegge/beads --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/giles","created_at":"2026-01-08T14:30:23.843917-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:37:19.657459-08:00","closed_at":"2026-01-08T14:37:19.657459-08:00","close_reason":"PR #960 reviewed and merged. Fix ensures dbPath is always absolute via CanonicalizePath, preventing filepath.Rel errors in sync-branch mode."} {"id":"bd-fmdy","title":"Merge: bd-kzda","description":"branch: polecat/toast\ntarget: main\nsource_issue: bd-kzda\nrig: beads","status":"closed","priority":3,"issue_type":"merge-request","created_at":"2025-12-23T00:27:28.952413-08:00","updated_at":"2025-12-23T01:33:25.731326-08:00","closed_at":"2025-12-23T01:33:25.731326-08:00"} {"id":"bd-fom","title":"Remove all deletions.jsonl code except migration","description":"There's deletions manifest code spread across the entire codebase that should have been removed after tombstone migration:\n\nFiles with deletions code (non-migration):\n- internal/deletions/ - entire package\n- cmd/bd/sync.go - 25+ references, auto-compact, sanitize\n- cmd/bd/delete.go - dual-writes to deletions.jsonl\n- internal/importer/importer.go - checks deletions manifest\n- internal/syncbranch/worktree.go - merges deletions.jsonl\n- cmd/bd/doctor/fix/sync.go - cleanupDeletionsManifest\n- cmd/bd/doctor/fix/deletions.go - HydrateDeletionsManifest\n- cmd/bd/integrity.go - checks deletions for data loss\n- cmd/bd/deleted.go - entire command\n- cmd/bd/compact.go - pruneDeletionsManifest\n- cmd/bd/doctor.go - checkDeletionsManifest\n- Plus many more\n\nAction: Aggressively remove all non-migration deletions code. Tombstones are the only deletion mechanism now.","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-16T13:29:04.960863-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"} -{"id":"bd-fqze8","title":"Add 'crystallizes' field for work economics","description":"dispatched_by: beads/crew/emma\n\nAdd boolean field to track whether work compounds (crystallizes=true: code, features) or evaporates (crystallizes=false: ops, support). Per Decision 006, this affects CV weighting. Default: false (conservative).","status":"closed","priority":1,"issue_type":"task","assignee":"beads/crew/fang","created_at":"2026-01-10T16:34:06.487466-08:00","created_by":"gastown/crew/max","updated_at":"2026-01-10T19:33:17.694331-08:00","closed_at":"2026-01-10T19:33:17.694331-08:00","close_reason":"Implementation complete: added crystallizes field to Issue struct, schema, migration (036), and all relevant queries/scans. Build passes.","dependencies":[{"issue_id":"bd-fqze8","depends_on_id":"bd-imi7w","type":"parent-child","created_at":"2026-01-10T16:34:21.496543-08:00","created_by":"gastown/crew/max"}]} +{"id":"bd-fqze8","title":"Add 'crystallizes' field for work economics","description":"dispatched_by: beads/crew/emma\n\nAdd boolean field to track whether work compounds (crystallizes=true: code, features) or evaporates (crystallizes=false: ops, support). Per Decision 006, this affects CV weighting. Default: false (conservative).","status":"closed","priority":1,"issue_type":"task","assignee":"beads/crew/fang","created_at":"2026-01-10T16:34:06.487466-08:00","created_by":"gastown/crew/max","updated_at":"2026-01-10T23:21:17.458797-08:00","closed_at":"2026-01-10T23:21:17.458797-08:00","close_reason":"Crystallizes field implemented","dependencies":[{"issue_id":"bd-fqze8","depends_on_id":"bd-imi7w","type":"parent-child","created_at":"2026-01-10T16:34:21.496543-08:00","created_by":"gastown/crew/max"}]} {"id":"bd-frkzo","title":"Session ended: gt-gastown-crew-george","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-07T21:51:17.681136-08:00","created_by":"beads/witness","updated_at":"2026-01-09T21:15:40.68839-08:00","closed_at":"2026-01-09T21:15:40.68839-08:00","close_reason":"Stale session ended events"} {"id":"bd-fsb1","title":"Test issue","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T11:21:51.383077-08:00","updated_at":"2025-11-05T11:21:56.888913-08:00","closed_at":"2025-11-05T11:21:56.888913-08:00"} {"id":"bd-fu83","title":"Fix daemon/direct mode inconsistency in relate and duplicate commands","description":"The relate.go and duplicate.go commands have inconsistent daemon/direct mode handling:\n\nWhen daemonClient is connected, they resolve IDs via RPC but then perform updates directly via store.UpdateIssue(), bypassing the daemon.\n\nAffected locations:\n- relate.go:125-139 (runRelate update)\n- relate.go:235-246 (runUnrelate update) \n- duplicate.go:120 (runDuplicate update)\n- duplicate.go:207 (runSupersede update)\n\nShould either use RPC for updates when daemon is running, or document why direct access is intentional.","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-12-16T20:52:54.164189-08:00","updated_at":"2025-12-21T21:47:14.10222-08:00","closed_at":"2025-12-21T21:47:14.10222-08:00"} @@ -1103,7 +1106,7 @@ {"id":"bd-h8ym","title":"Wait for CI to pass","description":"Monitor GitHub Actions - all checks must pass before release artifacts are built","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-21T13:52:33.066792-08:00","updated_at":"2025-12-21T13:53:49.454536-08:00","deleted_at":"2025-12-21T13:53:49.454536-08:00","deleted_by":"stevey","delete_reason":"manual delete","original_type":"task"} {"id":"bd-haxi","title":"Restart running daemons","description":"Kill and restart any running bd daemons to pick up new version: pkill -f 'bd daemon' \u0026\u0026 bd daemon --start","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-21T13:52:33.066262-08:00","updated_at":"2025-12-21T13:53:49.757078-08:00","deleted_at":"2025-12-21T13:53:49.757078-08:00","deleted_by":"stevey","delete_reason":"manual delete","original_type":"task"} {"id":"bd-haze","title":"Fix beads-9yc: pinned column missing from schema. gt mail...","description":"Fix beads-9yc: pinned column missing from schema. gt mail send fails because some beads DBs lack the pinned column. Add migration to ensure it exists.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-19T15:05:33.394801-08:00","updated_at":"2025-12-21T15:26:35.171757-08:00","closed_at":"2025-12-21T15:26:35.171757-08:00"} -{"id":"bd-hcppl","title":"Merge: ruby-mk905whv","description":"branch: polecat/ruby-mk905whv\ntarget: main\nsource_issue: ruby-mk905whv\nrig: beads\nagent_bead: bd-beads-polecat-ruby\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:04.892148-08:00","created_by":"beads/polecats/ruby","updated_at":"2026-01-10T21:03:04.892148-08:00","labels":["gt:merge-request"]} +{"id":"bd-hcppl","title":"Merge: ruby-mk905whv","description":"branch: polecat/ruby-mk905whv\ntarget: main\nsource_issue: ruby-mk905whv\nrig: beads\nagent_bead: bd-beads-polecat-ruby\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:04.892148-08:00","created_by":"beads/polecats/ruby","updated_at":"2026-01-10T22:05:21.848032-08:00","closed_at":"2026-01-10T22:05:21.848032-08:00","close_reason":"Changes already on main (patch dropped during rebase)","labels":["gt:merge-request"]} {"id":"bd-hdt","title":"Implement auto-merge functionality in duplicates command","description":"The duplicates.go file has a TODO at line 95 to implement the performMerge function for automatic duplicate merging. Currently it just prints a warning message. This would automate the merge process instead of just suggesting commands.","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-21T18:55:02.828619-05:00","updated_at":"2025-12-09T18:38:37.693818772-05:00","closed_at":"2025-11-27T22:36:11.517878-08:00"} {"id":"bd-hfyz","title":"Session ended: gt-beads-crew-emma","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-07T01:09:26.199301-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-07T01:09:26.233806-08:00","closed_at":"2026-01-07T01:09:26.233806-08:00","close_reason":"auto-closed session event"} {"id":"bd-hhv3","title":"Test and document molecular chemistry commands","description":"## Context\n\nImplemented the molecular chemistry UX commands per the design docs:\n- gastown/mayor/rig/docs/molecular-chemistry.md\n- gastown/mayor/rig/docs/chemistry-design-changes.md\n\nCommit: cadf798b\n\n## New Commands to Test\n\n| Command | Purpose |\n|---------|---------|\n| `bd pour \u003cproto\u003e` | Instantiate proto as persistent mol |\n| `bd wisp create \u003cproto\u003e` | Instantiate proto as ephemeral wisp |\n| `bd hook [--agent]` | Inspect what's on an agent's hook |\n\n## Enhanced Commands to Test\n\n| Command | Changes |\n|---------|---------|\n| `bd mol spawn --pour` | New flag, `--persistent` deprecated |\n| `bd mol bond --pour` | Force liquid phase on wisp target |\n| `bd pin --for \u003cagent\u003e --start` | Chemistry workflow support |\n\n## Test Scenarios\n\n1. **bd pour**: Create persistent mol from a proto\n - Verify creates in .beads/ (not .beads-wisp/)\n - Verify variable substitution works\n - Verify --dry-run works\n\n2. **bd wisp create**: Create ephemeral wisp from proto\n - Verify creates in .beads-wisp/\n - Verify bd wisp list shows it\n - Verify bd mol squash works\n - Verify bd mol burn works\n\n3. **bd hook**: Inspect pinned work\n - Pin something, verify bd hook shows it\n - Test --agent flag\n - Test --json output\n\n4. **bd pin --for**: Assign work to agent\n - Verify sets pinned=true\n - Verify sets assignee\n - Verify --start sets status=in_progress\n\n5. **bd mol bond --pour**: Force liquid on wisp target\n - Bond a proto to a wisp with --pour\n - Verify spawned issues are in .beads/\n\n## Documentation\n\n- Update CLAUDE.md with new commands\n- Add examples to --help output (already done)\n- Consider adding to docs/CLI_REFERENCE.md\n\n## Code Review\n\n- Check for edge cases\n- Verify error messages are helpful\n- Ensure --json output is consistent","status":"closed","priority":1,"issue_type":"task","created_at":"2025-12-22T02:22:10.906646-08:00","updated_at":"2025-12-22T02:55:37.983703-08:00","closed_at":"2025-12-22T02:55:37.983703-08:00"} @@ -1304,7 +1307,7 @@ {"id":"bd-lln","title":"Add tests for performFlush error handling in FlushManager","description":"Test coverage gap identified by automated analysis (vc-217).\n\n**Original Issue:** [deleted:bd-da96-baseline-lint]\n\nIn cmd/bd/flush_manager.go:269, the performFlush method is flagged by unparam as always returning nil, indicating the error return value is never used.\n\nAdd tests to determine:\n- Whether performFlush can actually return errors in failure scenarios\n- If error return is needed, add tests for error cases (disk full, permission denied, etc.)\n- If error return is not needed, refactor to remove unused return value\n- Test full export vs incremental export error handling\n\nThis ensures proper error handling in the flush mechanism and removes dead code if the return value is unnecessary.\n\n_This issue was automatically created by AI test coverage analysis._","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-21T10:25:33.533653-05:00","updated_at":"2025-11-21T21:29:36.985464294-05:00","closed_at":"2025-11-21T19:31:21.876949-05:00","dependencies":[{"issue_id":"bd-lln","depends_on_id":"bd-da96-baseline-lint","type":"discovered-from","created_at":"2025-11-21T10:25:33.534913-05:00","created_by":"ai-supervisor"}]} {"id":"bd-lm2q","title":"Fix `bd sync` failure due to daemon auto-export timestamp skew","description":"`bd sync` fails with false-positive \"JSONL is newer than database\" after daemon auto-export.\nRoot Cause: Daemon exports local changes to JSONL, updating its timestamp. `bd sync` sees JSONL.mtime \u003e DB.mtime and assumes external changes, blocking export.\nProposed Fixes:\n1. `bd sync` auto-imports if timestamp matches but content differs (or just auto-imports).\n2. Content-based comparison instead of timestamp only.\n","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-20T18:56:16.876685-05:00","updated_at":"2025-11-20T22:02:51.641709-05:00","closed_at":"2025-11-20T20:54:39.512574-05:00"} {"id":"bd-lmbzt","title":"Refinery Patrol","description":"Merge queue processor patrol loop with verification gates.","status":"closed","priority":2,"issue_type":"molecule","created_at":"2026-01-07T21:42:19.764814-08:00","created_by":"gastown/crew/george","updated_at":"2026-01-09T21:15:43.004822-08:00","closed_at":"2026-01-09T21:15:43.004822-08:00","close_reason":"Orphaned patrol molecules"} -{"id":"bd-lmqhe","title":"restoreBeadsDirFromBranch fails when beads directory is redirected","description":"When a repo has a .beads/redirect file pointing to a shared beads directory (e.g., crew repos redirecting to ../../mayor/rig/.beads), the restoreBeadsDirFromBranch function in sync.go fails because it runs git checkout from the local repo but with a path outside that repo. Non-fatal (sync completes), but should skip restore when redirected since the beads dir is in a different repo anyway. Fix: check GetRedirectInfo().IsRedirected and return early.","status":"in_progress","priority":2,"issue_type":"bug","created_at":"2026-01-09T14:16:11.168549-08:00","created_by":"gastown/crew/george","updated_at":"2026-01-10T21:23:09.87388-08:00"} +{"id":"bd-lmqhe","title":"restoreBeadsDirFromBranch fails when beads directory is redirected","description":"When a repo has a .beads/redirect file pointing to a shared beads directory (e.g., crew repos redirecting to ../../mayor/rig/.beads), the restoreBeadsDirFromBranch function in sync.go fails because it runs git checkout from the local repo but with a path outside that repo. Non-fatal (sync completes), but should skip restore when redirected since the beads dir is in a different repo anyway. Fix: check GetRedirectInfo().IsRedirected and return early.","status":"closed","priority":2,"issue_type":"bug","created_at":"2026-01-09T14:16:11.168549-08:00","created_by":"gastown/crew/george","updated_at":"2026-01-10T22:12:20.463489-08:00","closed_at":"2026-01-10T22:12:20.463489-08:00","close_reason":"fixed"} {"id":"bd-lo4","title":"Test pinned issue","status":"tombstone","priority":2,"issue_type":"task","created_at":"2025-12-18T21:44:49.031385-08:00","updated_at":"2025-12-18T21:47:25.055109-08:00","deleted_at":"2025-12-18T21:47:25.055109-08:00","deleted_by":"daemon","delete_reason":"delete","original_type":"task"} {"id":"bd-lrj8","title":"Technical debt: Scattered TODOs should be tracked as issues","description":"Multiple TODO comments exist in the codebase that should be tracked as proper issues:\n\n1. cmd/bd/migrate_hash_ids.go:24 - 'Consider integrating into bd doctor migration detection'\n2. cmd/bd/migrate_tombstones.go:72 - Same\n3. cmd/bd/migrate_sync.go:16 - Same\n4. cmd/bd/migrate_issues.go:15 - Same\n5. cmd/bd/create.go:164 - 'Switch to target repo for multi-repo support'\n6. cmd/bd/create.go:208 - 'Add RPC method to get config in daemon mode'\n7. cmd/bd/daemon_logger.go:131 - 'Remove this once all callers are updated'\n8. cmd/bd/mol_stale.go:67 - 'Add RPC endpoint for stale check'\n9. cmd/bd/sync_test.go:444 - 'Refactor to use direct import logic'\n10. cmd/bd/jira.go:633 - 'In a full implementation, fetch Jira issue and compare timestamps'\n11. internal/formula/types.go:170,174,179,186,210 - Multiple 'Not yet implemented' TODOs\n12. internal/importer/importer_test.go:1010 - 'Test hangs due to database deadlock'\n\nConsider:\n1. Running 'grep -r TODO' periodically to find new ones\n2. Adding a lint rule to discourage inline TODOs\n3. Converting each to a bd issue with proper tracking\n\nLocation: Various files across codebase","status":"closed","priority":4,"issue_type":"chore","created_at":"2025-12-28T15:32:57.125279-08:00","created_by":"beads/crew/dave","updated_at":"2025-12-28T16:34:10.911155-08:00","closed_at":"2025-12-28T16:34:10.911155-08:00","dependencies":[{"issue_id":"bd-lrj8","depends_on_id":"bd-784c","type":"parent-child","created_at":"2025-12-28T15:38:04.33312-08:00","created_by":"daemon"}]} {"id":"bd-lsv4","title":"GH#444: Fix inconsistent status naming in_progress vs in-progress","description":"Documentation uses in-progress (hyphen) but code expects in_progress (underscore). Update all docs to use canonical in_progress. See GitHub issue #444.","status":"tombstone","priority":2,"issue_type":"bug","created_at":"2025-12-16T01:03:14.349425-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"} @@ -1492,7 +1495,7 @@ {"id":"bd-o4qy","title":"Improve CheckStaleness error handling","description":"## Problem\n\nCheckStaleness returns 'false' (not stale) for multiple error conditions instead of returning errors. This masks problems.\n\n**Location:** internal/autoimport/autoimport.go:253-285\n\n## Edge Cases That Return False\n\n1. **Invalid last_import_time format** (line 259-262)\n2. **No JSONL file found** (line 267-277) \n3. **JSONL stat fails** (line 279-282)\n\n## Fix\n\nReturn errors for abnormal conditions:\n\n```go\nlastImportTime, err := time.Parse(time.RFC3339, lastImportStr)\nif err != nil {\n return false, fmt.Errorf(\"corrupted last_import_time: %w\", err)\n}\n\nif jsonlPath == \"\" {\n return false, fmt.Errorf(\"no JSONL file found\")\n}\n\nstat, err := os.Stat(jsonlPath)\nif err != nil {\n return false, fmt.Errorf(\"cannot stat JSONL: %w\", err)\n}\n```\n\n## Impact\nMedium - edge cases are rare but should be handled\n\n## Effort \n30 minutes - requires updating callers in RPC server","status":"tombstone","priority":2,"issue_type":"bug","created_at":"2025-11-20T20:17:27.606219-05:00","updated_at":"2025-12-25T01:21:01.952723-08:00","dependencies":[{"issue_id":"bd-o4qy","depends_on_id":"bd-2q6d","type":"blocks","created_at":"2025-11-20T20:18:26.81065-05:00","created_by":"stevey"}],"deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"} {"id":"bd-o55a","title":"GH#509: bd doesn't find .beads when running from nested worktrees","description":"When worktrees are nested under main repo (.worktrees/feature/), bd stops at worktree git root instead of continuing to find .beads in parent. See GitHub issue #509 for detailed fix suggestion.","status":"tombstone","priority":2,"issue_type":"bug","created_at":"2025-12-16T01:03:20.281591-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"} {"id":"bd-o5xe","title":"Molecule bonding: composable workflow templates","description":"Vision: Molecules should be composable like LEGO bricks or Mad Max war rig sections. Bonding lets you attach molecules together to create compound workflows.\n\nTHREE BONDING CONTEXTS:\n1. Template-time: bd mol bond A B → Create reusable compound proto\n2. Spawn-time: bd mol spawn A --attach B → Attach modules when instantiating \n3. Runtime: bd mol attach epic B → Add to running workflow\n\nBOND TYPES:\n- Sequential: B after A completes (feature → deploy)\n- Parallel: B runs alongside A (feature + docs)\n- Conditional: B only if A fails (feature → hotfix)\n\nBOND POINTS (Attachment Sites):\n- Default: B depends on A root epic completion\n- Explicit: --after issue-id for specific attachment\n- Future: Named bond points in proto definitions\n\nVARIABLE FLOW:\n- Shared namespace between bonded molecules\n- Warn on variable name conflicts\n- Future: explicit mapping with --map\n\nDATA MODEL: Issues track bonded_from to preserve compound lineage.\n\nSUCCESS CRITERIA:\n- Can bond two protos into a compound proto\n- Can spawn with --attach for on-the-fly composition\n- Can attach molecules to running workflows\n- Compound structure visible in bd mol show\n- Variables flow correctly between bonded molecules","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-12-21T00:58:35.479009-08:00","updated_at":"2025-12-21T17:19:45.871164-08:00","closed_at":"2025-12-21T17:19:45.871164-08:00"} -{"id":"bd-o64zq","title":"Merge: garnet-mk9048ue","description":"branch: polecat/garnet-mk9048ue\ntarget: main\nsource_issue: garnet-mk9048ue\nrig: beads\nagent_bead: bd-beads-polecat-garnet\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:03.713961-08:00","created_by":"beads/polecats/garnet","updated_at":"2026-01-10T21:03:03.713961-08:00","labels":["gt:merge-request"]} +{"id":"bd-o64zq","title":"Merge: garnet-mk9048ue","description":"branch: polecat/garnet-mk9048ue\ntarget: main\nsource_issue: garnet-mk9048ue\nrig: beads\nagent_bead: bd-beads-polecat-garnet\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:03.713961-08:00","created_by":"beads/polecats/garnet","updated_at":"2026-01-10T22:01:41.485462-08:00","closed_at":"2026-01-10T22:01:41.485462-08:00","close_reason":"merged to main","labels":["gt:merge-request"]} {"id":"bd-o78","title":"Enhance `bd doctor` to verify Claude Code integration","description":"Add checks to `bd doctor` that verify Claude Code integration is properly set up when .claude/ directory or Claude environment is detected.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-11T23:30:05.782406-08:00","updated_at":"2025-11-12T00:12:07.717579-08:00","dependencies":[{"issue_id":"bd-o78","depends_on_id":"bd-rpn","type":"blocks","created_at":"2025-11-11T23:30:05.783234-08:00","created_by":"daemon"},{"issue_id":"bd-o78","depends_on_id":"bd-br8","type":"blocks","created_at":"2025-11-11T23:30:05.783647-08:00","created_by":"daemon"},{"issue_id":"bd-o78","depends_on_id":"bd-90v","type":"parent-child","created_at":"2025-11-11T23:31:27.886095-08:00","created_by":"daemon"}]} {"id":"bd-o7ik","title":"Priority: refactor mol.go then bd squash","description":"Two tasks:\n\n1. bd-cnwx - Refactor mol.go (1200+ lines, split by subcommand)\n2. bd-2vh3 - Ephemeral cleanup (bd cleanup --ephemeral)\n\nRefactor first - smaller, unblocks easier review of future mol work.\n\n- Mayor","status":"closed","priority":2,"issue_type":"message","created_at":"2025-12-21T11:31:38.287244-08:00","updated_at":"2025-12-21T12:59:32.937472-08:00","closed_at":"2025-12-21T12:59:32.937472-08:00"} {"id":"bd-o91r","title":"Polymorphic bond command: bd mol bond A B","description":"Implement proto-to-proto bonding to create compound protos.\n\nCOMMAND: bd mol bond proto-feature proto-testing [--as proto-feature-tested] [--type sequential]\n\nBEHAVIOR:\n- Load both proto subgraphs\n- Create new compound proto with combined structure\n- B's root becomes child of A's root (sequential) or sibling (parallel)\n- Wire dependencies: B depends on A's leaf nodes (sequential) or runs parallel\n- Store bonded_from metadata for lineage tracking\n\nFLAGS:\n- --as NAME: Custom ID for compound proto (default: generates hash)\n- --type: sequential (default) or parallel\n- --dry-run: Preview compound structure\n\nOUTPUT:\n- New compound proto in catalog\n- Shows combined variable requirements","notes":"UPDATE: bond is now polymorphic - handles proto+proto, proto+mol, and mol+mol based on operand types. Separate 'attach' command eliminated.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-12-21T00:58:55.604705-08:00","updated_at":"2025-12-21T10:10:25.385995-08:00","closed_at":"2025-12-21T10:10:25.385995-08:00","dependencies":[{"issue_id":"bd-o91r","depends_on_id":"bd-o5xe","type":"parent-child","created_at":"2025-12-21T00:59:51.30026-08:00","created_by":"daemon"},{"issue_id":"bd-o91r","depends_on_id":"bd-mh4w","type":"blocks","created_at":"2025-12-21T00:59:51.569391-08:00","created_by":"daemon"},{"issue_id":"bd-o91r","depends_on_id":"bd-rnnr","type":"blocks","created_at":"2025-12-21T00:59:51.652397-08:00","created_by":"daemon"}]} @@ -1509,7 +1512,7 @@ {"id":"bd-oif6","title":"Vendor beads-merge Go code into internal/merge/","description":"Copy beads-merge source code from @neongreen's repo into bd codebase.\n\n**Tasks**:\n- Create `internal/merge/` package\n- Copy merge algorithm code\n- Add attribution header to all files\n- Update imports to use bd's internal types\n- Add LICENSE/ATTRIBUTION file crediting @neongreen\n- Keep original algorithm intact\n\n**Source**: https://github.com/neongreen/mono/tree/main/beads-merge","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T18:42:20.405283-08:00","updated_at":"2025-11-05T18:52:53.71713-08:00","closed_at":"2025-11-05T18:52:53.71713-08:00","dependencies":[{"issue_id":"bd-oif6","depends_on_id":"bd-qqvw","type":"parent-child","created_at":"2025-11-05T18:42:28.69196-08:00","created_by":"daemon"}]} {"id":"bd-ola6","title":"Implement transaction retry logic for SQLITE_BUSY","description":"BEGIN IMMEDIATE fails immediately on SQLITE_BUSY instead of retrying with exponential backoff.\n\nLocation: internal/storage/sqlite/sqlite.go:223-225\n\nProblem:\n- Under concurrent write load, BEGIN IMMEDIATE can fail with SQLITE_BUSY\n- Current implementation fails immediately instead of retrying\n- Results in spurious failures under normal concurrent usage\n\nSolution: Implement exponential backoff retry:\n- Retry up to N times (e.g., 5)\n- Backoff: 10ms, 20ms, 40ms, 80ms, 160ms\n- Check for context cancellation between retries\n- Only retry on SQLITE_BUSY/database locked errors\n\nImpact: Spurious failures under concurrent write load\n\nEffort: 3 hours","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-16T14:51:31.247147-08:00","updated_at":"2025-12-21T21:39:23.071036-08:00","closed_at":"2025-12-21T21:39:23.071036-08:00"} {"id":"bd-om4a","title":"Support external: prefix in blocked_by field","description":"Allow blocked_by to include external project references:\n\n```bash\nbd update gt-xyz --blocked-by=\"external:beads:mol-run-assignee\"\n```\n\nSyntax: `external:\u003cproject\u003e:\u003ccapability\u003e`\n- project: name from external_projects config\n- capability: matches provides:\u003ccapability\u003e label in target project\n\nStorage: Store as-is in blocked_by array. Resolution happens at query time.\n\nPart of cross-project dependency system.\nSee: gastown/docs/cross-project-deps.md","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-12-21T22:37:29.725196-08:00","updated_at":"2025-12-21T23:07:48.127045-08:00","closed_at":"2025-12-21T23:07:48.127045-08:00"} -{"id":"bd-omhj8","title":"Merge: quartz-mk8zzb7a","description":"branch: polecat/quartz-mk8zzb7a\ntarget: main\nsource_issue: quartz-mk8zzb7a\nrig: beads\nagent_bead: bd-beads-polecat-quartz\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:02:58.104536-08:00","created_by":"beads/polecats/quartz","updated_at":"2026-01-10T21:02:58.104536-08:00","labels":["gt:merge-request"]} +{"id":"bd-omhj8","title":"Merge: quartz-mk8zzb7a","description":"branch: polecat/quartz-mk8zzb7a\ntarget: main\nsource_issue: quartz-mk8zzb7a\nrig: beads\nagent_bead: bd-beads-polecat-quartz\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:02:58.104536-08:00","created_by":"beads/polecats/quartz","updated_at":"2026-01-10T21:53:09.650498-08:00","closed_at":"2026-01-10T21:53:09.650498-08:00","close_reason":"Branch no longer exists on remote","labels":["gt:merge-request"]} {"id":"bd-omrf","title":"Merge: oast-1766978911452","description":"branch: polecat/Toast-1766978911452\ntarget: main\nsource_issue: oast-1766978911452\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-28T19:51:11.183702-08:00","created_by":"beads/polecats/Toast","updated_at":"2025-12-29T13:40:29.718392-08:00","closed_at":"2025-12-29T13:40:29.718392-08:00","close_reason":"Stale/spurious - test artifacts, merged PRs, or auto-close candidates"} {"id":"bd-omx1","title":"Add `bd merge` command wrapping 3-way merge logic","description":"Implement CLI command to invoke beads-merge functionality.\n\n**Interface**:\n```bash\nbd merge \u003coutput\u003e \u003cbase\u003e \u003cleft\u003e \u003cright\u003e\nbd merge --debug \u003coutput\u003e \u003cbase\u003e \u003cleft\u003e \u003cright\u003e\n```\n\n**Behavior**:\n- Exit code 0 on clean merge\n- Exit code 1 if conflicts (write conflict markers)\n- Support --debug flag for verbose output\n- Match beads-merge's existing behavior\n\n**File**: `cmd/bd/merge.go`","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T18:42:20.427429-08:00","updated_at":"2025-11-05T19:01:29.071365-08:00","closed_at":"2025-11-05T19:01:29.071365-08:00","dependencies":[{"issue_id":"bd-omx1","depends_on_id":"bd-qqvw","type":"parent-child","created_at":"2025-11-05T18:42:28.709123-08:00","created_by":"daemon"},{"issue_id":"bd-omx1","depends_on_id":"bd-oif6","type":"blocks","created_at":"2025-11-05T18:42:35.436444-08:00","created_by":"daemon"}]} {"id":"bd-oos3","title":"Phase 3: GitHub Gates (Refinery integration)","description":"Implement GitHub gate evaluation in Refinery patrol.\n\n## Gate Types\n- `gh:run` - GitHub Actions workflow run\n- `gh:pr` - Pull request merged/closed status\n\n## Behavior\n- Refinery patrol includes `bd gate check --type=gh`\n- Uses `gh` CLI to check status\n- Resolved gates close automatically\n\n## Implementation\n1. Add GitHub gate check to mol-refinery-patrol.formula.toml\n2. `bd gate check --type=gh:run` calls `gh run view \u003cid\u003e --json status`\n3. `bd gate check --type=gh:pr` calls `gh pr view \u003cid\u003e --json state,merged`\n4. Success states close gate, failure states escalate\n\n## Acceptance Criteria\n- [ ] `bd gate check --type=gh` works for both run and pr\n- [ ] Refinery patrol runs GitHub check each cycle\n- [ ] Successful workflow/merged PR closes gate\n- [ ] Failed workflow/closed-unmerged PR escalates","status":"closed","priority":2,"issue_type":"task","assignee":"beads/polecats/jasper","created_at":"2026-01-02T01:55:42.042362-08:00","created_by":"mayor","updated_at":"2026-01-02T12:48:58.680959-08:00","closed_at":"2026-01-02T12:48:58.680959-08:00","close_reason":"Implemented bd gate check --type=gh for GitHub gate evaluation. Added check-github-gates step to mol-refinery-patrol.formula.toml (v4) in gastown rig.","dependencies":[{"issue_id":"bd-oos3","depends_on_id":"bd-mcva","type":"parent-child","created_at":"2026-01-02T01:55:53.944055-08:00","created_by":"mayor"}]} @@ -1587,6 +1590,7 @@ {"id":"bd-q59i","title":"User Diagnostics (bd doctor --perf)","description":"Extend cmd/bd/doctor.go to add --perf flag for user performance diagnostics.\n\nFunctionality:\n- Add --perf flag to existing bd doctor command\n- Collect system info (OS, arch, Go version, SQLite version)\n- Collect database stats (size, issue counts, dependency counts)\n- Time key operations on user's actual database:\n * bd ready\n * bd list --status=open\n * bd show \u003crandom-issue\u003e\n * bd create (with rollback)\n * Search with filters\n- Generate CPU profile automatically (timestamped filename)\n- Output simple report with platform info, timings, profile location\n\nOutput example:\n Beads Performance Diagnostics\n Platform: darwin/arm64\n Database: 8,234 issues (4,123 open)\n \n Operation Performance:\n bd ready 42ms\n bd list --status=open 15ms\n \n Profile saved: beads-perf-2025-11-13.prof\n View: go tool pprof -http=:8080 beads-perf-2025-11-13.prof\n\nImplementation:\n- Extend cmd/bd/doctor.go (~100 lines)\n- Use runtime/pprof for CPU profiling\n- Use time.Now()/time.Since() for timing\n- Rollback test operations (don't modify user's database)","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-13T22:23:11.988562-08:00","updated_at":"2025-11-13T22:45:57.26294-08:00","closed_at":"2025-11-13T22:45:57.26294-08:00","dependencies":[{"issue_id":"bd-q59i","depends_on_id":"bd-zj8e","type":"blocks","created_at":"2025-11-13T22:24:06.336236-08:00","created_by":"daemon"}]} {"id":"bd-q652","title":"Database pollution in ~/src/dave/vc: 895 issues vs canonical 310","description":"~/src/dave/vc/.beads/beads.db has 895 total issues (675 open, 149 closed), but canonical ~/src/vc/.beads/vc.db has only 310 issues (230 open). This is 585 extra issues - likely pollution from other repositories.\n\nNeed to:\n1. Identify which issues are polluted (use detect-pollution)\n2. Compare issue IDs between dave/vc and canonical vc databases\n3. Determine pollution source (beads repo? other repos?)\n4. Clean up polluted database\n5. Root cause: why did pollution occur?","notes":"Investigation findings so far:\n- Polluted DB (~/src/dave/vc/.beads/beads.db): 241 issues (180 open, 43 closed)\n- Canonical DB (~/src/vc/.beads/vc.db): 310 issues (230 open, 62 closed)\n- Contradiction: Polluted has FEWER issues, not more (241 \u003c 310, diff of 69)\n- Only 1 unique ID in polluted: vc-55fi\n- All source_repo fields are set to \".\" in both databases\n- Issue description claims 895 issues in polluted vs 310 canonical - numbers don't match current state\n- Possible: Pollution was already partially cleaned, or issue description refers to different database?","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-07T00:07:37.999168-08:00","updated_at":"2025-11-07T00:13:32.179396-08:00","closed_at":"2025-11-07T00:13:32.179396-08:00"} {"id":"bd-q7sd","title":"Test issue A","status":"closed","priority":3,"issue_type":"task","created_at":"2026-01-04T11:26:43.935609-08:00","created_by":"beads/polecats/onyx","updated_at":"2026-01-04T11:27:38.747869-08:00","closed_at":"2026-01-04T11:27:38.747869-08:00","close_reason":"test cleanup","dependencies":[{"issue_id":"bd-q7sd","depends_on_id":"bd-vuc2","type":"blocks","created_at":"2026-01-04T11:27:28.425196-08:00","created_by":"beads/polecats/onyx"}]} +{"id":"bd-qcts0","title":"Digest: mol-refinery-patrol","description":"Patrol: queue empty, 0 branches merged","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T22:15:09.28425-08:00","updated_at":"2026-01-10T22:15:09.28425-08:00","closed_at":"2026-01-10T22:15:09.282072-08:00","close_reason":"Squashed from 11 wisps","dependencies":[{"issue_id":"bd-qcts0","depends_on_id":"bd-wisp-3uv","type":"parent-child","created_at":"2026-01-10T22:15:09.285194-08:00","created_by":"beads/refinery"}]} {"id":"bd-qd5w","title":"Session ended: gt-beads-crew-emma","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-07T00:37:31.393703-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-07T00:37:31.426087-08:00","closed_at":"2026-01-07T00:37:31.426087-08:00","close_reason":"auto-closed session event"} {"id":"bd-qdsx","title":"Support daemon.auto_commit and daemon.auto_push in config.yaml (GH#871)","description":"Allow team-wide auto-sync settings via config.yaml instead of SQLite. This enables teams to share auto-commit/auto-push settings through version control.","status":"closed","priority":2,"issue_type":"feature","created_at":"2026-01-04T10:38:09.815971-08:00","created_by":"beads/crew/wolf","updated_at":"2026-01-04T10:42:32.823135-08:00","closed_at":"2026-01-04T10:42:32.823135-08:00","close_reason":"Fixed in 9880eaf7 - daemon.auto_* settings now in config.yaml"} {"id":"bd-qe7j","title":"Code smell: Incomplete TODOs in formula/types.go","description":"internal/formula/types.go has multiple TODO items for features that are defined in the schema but not implemented:\n\n- Line 170: Expand field not implemented in bd cook\n- Line 174: ExpandVars field not implemented\n- Line 179: Gate integration pending (bd-udsi gates)\n- Line 186: Condition evaluation not implemented\n- Line 210: Additional expansion features\n\n**Problem:**\n- Schema defines features that aren't implemented\n- Can confuse users who try to use these fields\n- Creates maintenance burden of unused code paths\n\n**Acceptance Criteria:**\n- [ ] Either implement the features OR\n- [ ] Remove unimplemented fields from schema OR\n- [ ] Document clearly which fields are future-only\n- [ ] Update related beads issues if they exist","status":"closed","priority":3,"issue_type":"chore","created_at":"2025-12-28T18:59:59.460434-08:00","created_by":"beads/crew/dave","updated_at":"2025-12-30T15:44:43.358286-08:00","closed_at":"2025-12-30T00:39:56.504522-08:00","close_reason":"Merged via refinery","dependencies":[{"issue_id":"bd-qe7j","depends_on_id":"bd-ox1o","type":"blocks","created_at":"2025-12-28T19:00:23.747872-08:00","created_by":"daemon"}]} @@ -1870,7 +1874,7 @@ {"id":"bd-wisp-v0n","title":"Verify version consistency","description":"Confirm all versions match 0.45.0.\n\n```bash\ngrep 'Version = ' cmd/bd/version.go\njq -r '.version' .claude-plugin/plugin.json\njq -r '.version' npm-package/package.json\ngrep 'version = ' integrations/beads-mcp/pyproject.toml\n```\n\nAll should show 0.45.0.\n","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-06T20:07:32.257354-08:00","updated_at":"2026-01-06T20:11:24.898472-08:00","closed_at":"2026-01-06T20:11:24.898472-08:00","close_reason":"Version bumped and verified: 0.45.0","dependencies":[{"issue_id":"bd-wisp-v0n","depends_on_id":"bd-wisp-bye","type":"blocks","created_at":"2026-01-06T20:07:32.276314-08:00","created_by":"beads/crew/dave"}]} {"id":"bd-wisp-w75","title":"Preflight: Check git status","description":"Ensure working tree is clean before starting release.\n\n```bash\ngit status\n```\n\nIf there are uncommitted changes, either:\n- Commit them first\n- Stash them: `git stash`\n- Abort and resolve\n","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-06T20:07:32.256152-08:00","updated_at":"2026-01-06T20:08:35.66615-08:00","closed_at":"2026-01-06T20:08:35.66615-08:00","close_reason":"Preflight checks passed"} {"id":"bd-wisp-z85","title":"Preflight: Pull latest","description":"Ensure we're up to date with origin.\n\n```bash\ngit pull --rebase\n```\n\nResolve any conflicts before proceeding.\n","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-06T20:07:32.25637-08:00","updated_at":"2026-01-06T20:08:35.668191-08:00","closed_at":"2026-01-06T20:08:35.668191-08:00","close_reason":"Preflight checks passed","dependencies":[{"issue_id":"bd-wisp-z85","depends_on_id":"bd-wisp-w75","type":"blocks","created_at":"2026-01-06T20:07:32.272193-08:00","created_by":"beads/crew/dave"}]} -{"id":"bd-wlzsd","title":"Merge: obsidian-mk99kht7","description":"branch: polecat/obsidian-mk99kht7\ntarget: main\nsource_issue: obsidian-mk99kht7\nrig: beads\nagent_bead: bd-beads-polecat-obsidian\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:34.490385-08:00","created_by":"beads/polecats/obsidian","updated_at":"2026-01-10T21:03:34.490385-08:00","labels":["gt:merge-request"]} +{"id":"bd-wlzsd","title":"Merge: obsidian-mk99kht7","description":"branch: polecat/obsidian-mk99kht7\ntarget: main\nsource_issue: obsidian-mk99kht7\nrig: beads\nagent_bead: bd-beads-polecat-obsidian\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:34.490385-08:00","created_by":"beads/polecats/obsidian","updated_at":"2026-01-10T21:53:11.57128-08:00","closed_at":"2026-01-10T21:53:11.57128-08:00","close_reason":"Branch no longer exists on remote","labels":["gt:merge-request"]} {"id":"bd-wmo","title":"PruneDeletions iterates map non-deterministically","description":"## Problem\n\n`PruneDeletions` iterates over `loadResult.Records` which is a map. Go maps iterate in random order, so:\n\n1. `result.PrunedIDs` order is non-deterministic\n2. `kept` slice order is non-deterministic → `WriteDeletions` output order varies\n\n## Location\n`internal/deletions/deletions.go:213`\n\n## Impact\n- Git diffs are noisy (file changes order on each prune)\n- Tests could be flaky if they depend on order\n- Harder to debug/audit\n\n## Fix\nSort by ID or timestamp before iterating:\n\n```go\n// Convert map to slice and sort\nvar records []DeletionRecord\nfor _, r := range loadResult.Records {\n records = append(records, r)\n}\nsort.Slice(records, func(i, j int) bool {\n return records[i].ID \u003c records[j].ID\n})\n```","status":"closed","priority":3,"issue_type":"bug","created_at":"2025-11-25T12:49:11.290916-08:00","updated_at":"2025-11-25T15:15:21.903649-08:00","closed_at":"2025-11-25T15:15:21.903649-08:00"} {"id":"bd-wp5j","title":"Merge: bd-indn","description":"branch: polecat/rictus\ntarget: main\nsource_issue: bd-indn\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-23T20:45:51.286598-08:00","updated_at":"2025-12-23T21:21:57.697826-08:00","closed_at":"2025-12-23T21:21:57.697826-08:00"} {"id":"bd-wqom","title":"Session ended: gt-beads-crew-dave","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-07T17:31:48.966642-08:00","created_by":"beads/crew/dave","updated_at":"2026-01-07T17:31:48.999529-08:00","closed_at":"2026-01-07T17:31:48.999529-08:00","close_reason":"auto-closed session event"} @@ -1895,8 +1899,10 @@ {"id":"bd-x5j9l","title":"Digest: mol-refinery-patrol","description":"Patrol complete: queue empty, 0 branches merged, 0 messages, main green","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T16:51:44.445264-08:00","updated_at":"2026-01-10T16:51:44.445264-08:00","closed_at":"2026-01-10T16:51:44.445228-08:00","close_reason":"Squashed from 11 wisps"} {"id":"bd-x5wg","title":"Create and push git tag v0.33.2","description":"Create the release tag and push it:\n\n```bash\ngit tag v0.33.2\ngit push origin v0.33.2\n```\n\nThis triggers the GoReleaser GitHub Action to build release binaries.","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-21T16:10:13.76223-08:00","updated_at":"2025-12-21T17:29:31.791368-08:00","deleted_at":"2025-12-21T17:29:31.791368-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"} {"id":"bd-x6kv","title":"Merge: jade-mjtlsejo","description":"branch: polecat/jade-mjtlsejo\ntarget: main\nsource_issue: jade-mjtlsejo\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-30T22:06:59.327455-08:00","created_by":"beads/polecats/jade","updated_at":"2026-01-01T10:43:18.62673-08:00","closed_at":"2026-01-01T10:43:18.62673-08:00","close_reason":"Stale MR - branch no longer exists on remote"} +{"id":"bd-x7i7c","title":"Pre-existing: SQLite scan column count mismatch (31 vs 32)","description":"Multiple tests failing on main with: 'sql: expected 31 destination arguments in Scan, not 32'\n\nAffected tests:\n- TestGetIssuesByLabel (internal/storage/sqlite)\n- TestMigrateContentHashColumn (internal/storage/sqlite)\n- TestResolveProtoIDOrTitle (cmd/bd)\n\nRoot cause appears to be a column added to the issues table without updating all Scan calls.\n\nDiscovered during refinery patrol while processing polecat/quartz-lmqhe.","status":"open","priority":1,"issue_type":"bug","created_at":"2026-01-10T22:11:22.005398-08:00","created_by":"beads/refinery","updated_at":"2026-01-10T22:11:22.005398-08:00"} {"id":"bd-xabtq","title":"Session ended: gt-beads-crew-dave","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-08T14:23:46.099872-08:00","created_by":"beads/crew/dave","updated_at":"2026-01-08T14:23:46.132871-08:00","closed_at":"2026-01-08T14:23:46.132871-08:00","close_reason":"auto-closed session event"} {"id":"bd-xai7h","title":"Review and merge PR #999: bsv terminal viewer","description":"Review and merge PR #999 from bglenden that adds bsv (Rust TUI viewer) to COMMUNITY_TOOLS.md.\n\nEasy-win criteria:\n- Documentation-only change (2 lines added)\n- Adds link to external community tool\n- No code changes, just adding to community tools list\n\nSteps:\n1. gh pr checkout 999 --repo steveyegge/beads\n2. Verify the addition follows existing format in COMMUNITY_TOOLS.md\n3. Check the linked repo exists and is legitimate\n4. gh pr merge 999 --repo steveyegge/beads --squash\n\nPR: https://github.com/steveyegge/beads/pull/999","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/fang","created_at":"2026-01-10T11:58:12.421204-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-10T12:06:20.483258-08:00","closed_at":"2026-01-10T12:06:20.483258-08:00","close_reason":"Reviewed and merged PR #999: bsv terminal viewer added to COMMUNITY_TOOLS.md"} +{"id":"bd-xbl46","title":"Digest: mol-refinery-patrol","description":"Patrol: queue empty, no branches to merge","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T23:20:56.191693-08:00","updated_at":"2026-01-10T23:20:56.191693-08:00","closed_at":"2026-01-10T23:20:56.191652-08:00","close_reason":"Squashed from 11 wisps","dependencies":[{"issue_id":"bd-xbl46","depends_on_id":"bd-wisp-4qx","type":"parent-child","created_at":"2026-01-10T23:20:56.19258-08:00","created_by":"beads/refinery"}]} {"id":"bd-xctp","title":"GH#519: bd sync fails when sync.branch is currently checked-out branch","status":"tombstone","priority":2,"issue_type":"bug","created_at":"2025-12-16T01:06:05.319281-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"} {"id":"bd-xfi2b","title":"Broken beads redirect: mayor/rig/.beads doesn't exist","description":"The beads redirect in polecats worktrees and rig-level .beads points to mayor/rig/.beads, but this directory doesn't exist.\n\nPath: /Users/stevey/gt/mayor/rig/.beads\nRedirect source: .beads/redirect contains 'mayor/rig/.beads'\n\nThis blocks gt done and gt handoff operations for polecats.","status":"closed","priority":1,"issue_type":"bug","created_at":"2026-01-10T21:12:30.823055-08:00","created_by":"beads/polecats/obsidian","updated_at":"2026-01-10T21:25:56.132031-08:00","closed_at":"2026-01-10T21:25:56.132031-08:00","close_reason":"Fixed: Redirect path was ../../../../mayor/rig/.beads (resolving to nonexistent /Users/stevey/gt/mayor/rig/.beads). Changed to ../../../mayor/rig/.beads (resolving correctly to /Users/stevey/gt/beads/mayor/rig/.beads). Fixed all 6 polecat worktrees."} {"id":"bd-xgsso","title":"Session ended: gt-beads-crew-fang","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-08T14:36:45.74668-08:00","created_by":"beads/crew/fang","updated_at":"2026-01-08T14:36:45.780975-08:00","closed_at":"2026-01-08T14:36:45.780975-08:00","close_reason":"auto-closed session event"} @@ -1941,12 +1947,13 @@ {"id":"bd-ycrq","title":"Consolidate daemon/daemons commands","description":"Merge daemons functionality into daemon command with subcommands. Currently have both 'daemon' and 'daemons' at top level.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-28T12:59:11.393637-08:00","created_by":"stevey","updated_at":"2025-12-28T13:05:28.776344-08:00","closed_at":"2025-12-28T13:05:28.776344-08:00"} {"id":"bd-ye0d","title":"troubleshoot GH#278 daemon exits every few secs","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-13T06:27:23.39509215-07:00","updated_at":"2025-11-25T17:48:43.62418-08:00","closed_at":"2025-11-25T17:48:43.62418-08:00"} {"id":"bd-yek6","title":"CLI tests (cli_fast_test.go) are slow and should be integration tests","description":"The TestCLI_* tests in cmd/bd/cli_fast_test.go are taking 4-5 seconds each (40+ seconds total), making them the slowest part of the fast test suite.\n\nCurrent timings:\n- TestCLI_Import: 4.73s\n- TestCLI_Blocked: 4.33s \n- TestCLI_DepTree: 4.15s\n- TestCLI_Close: 3.59s\n- TestCLI_DepAdd: 3.50s\n- etc.\n\nThese tests compile the bd binary once in init(), but then execute it multiple times per test with filesystem operations. Despite being named \"fast\", they're actually end-to-end CLI integration tests.\n\nOptions:\n1. Tag with //go:build integration (move to integration suite)\n2. Optimize: Use in-memory databases, reduce exec calls, better parallelization\n3. Keep as-is but understand they're the baseline for \"fast\" tests\n\nTotal test suite currently: 13.8s (cmd/bd alone is 12.8s, and most of that is these CLI tests)","notes":"Fixed by reusing existing bd binary from repo root instead of rebuilding.\n\nBefore: 15+ minutes (rebuilding binary for every test package)\nAfter: ~12 seconds (reuses pre-built binary)\n\nThe init() function now checks for ../../bd first before falling back to building. This means `go build \u0026\u0026 go test` is now fast.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-05T20:19:12.822543-08:00","updated_at":"2025-11-05T20:31:19.321787-08:00","closed_at":"2025-11-05T20:31:19.321787-08:00"} +{"id":"bd-yi824","title":"Digest: mol-refinery-patrol","description":"Patrol: Queue empty, no branches merged, inbox clear","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T22:21:14.477633-08:00","updated_at":"2026-01-10T22:21:14.477633-08:00","closed_at":"2026-01-10T22:21:14.477598-08:00","close_reason":"Squashed from 11 wisps","dependencies":[{"issue_id":"bd-yi824","depends_on_id":"bd-wisp-3mg","type":"parent-child","created_at":"2026-01-10T22:21:14.47851-08:00","created_by":"beads/refinery"}]} {"id":"bd-ykd9","title":"Add bd doctor --fix flag to automatically repair issues","description":"Add bd doctor --fix flag to automatically repair detected issues.\n\n## Current State\n- Doctor checks return issues with \"Fix\" field containing fix instructions\n- No automatic fix execution\n- User must manually follow fix instructions\n\n## Implementation\n\n### 1. Add --fix flag to doctor.go\n```go\n// In cmd/bd/doctor.go init()\ndoctorCmd.Flags().Bool(\"fix\", false, \"Automatically fix detected issues\")\ndoctorCmd.Flags().Bool(\"yes\", false, \"Skip confirmation prompts (use with --fix)\")\n```\n\n### 2. Create fix registry (cmd/bd/doctor/fix/registry.go)\n```go\npackage fix\n\n// Fixer can automatically repair an issue\ntype Fixer interface {\n // CanFix returns true if this fixer handles the given check name\n CanFix(checkName string) bool\n // Fix attempts to repair the issue, returns error if failed\n Fix(ctx context.Context, issue *CheckResult) error\n // Description returns human-readable description of what will be fixed\n Description() string\n}\n\nvar registry []Fixer\n\nfunc Register(f Fixer) {\n registry = append(registry, f)\n}\n\nfunc GetFixer(checkName string) Fixer {\n for _, f := range registry {\n if f.CanFix(checkName) {\n return f\n }\n }\n return nil\n}\n```\n\n### 3. Implement fixers (one per file)\n\n**cmd/bd/doctor/fix/hooks.go**\n```go\ntype HooksFixer struct{}\n\nfunc (f *HooksFixer) CanFix(name string) bool {\n return name == \"git-hooks\" || name == \"hooks-outdated\"\n}\n\nfunc (f *HooksFixer) Fix(ctx context.Context, issue *CheckResult) error {\n return hooks.Install(\".\", true) // force reinstall\n}\n\nfunc (f *HooksFixer) Description() string {\n return \"Reinstall git hooks\"\n}\n\nfunc init() {\n Register(\u0026HooksFixer{})\n}\n```\n\n**cmd/bd/doctor/fix/sync_branch.go**\n```go\ntype SyncBranchFixer struct{}\n\nfunc (f *SyncBranchFixer) CanFix(name string) bool {\n return name == \"sync-branch-missing\" || name == \"sync-branch-diverged\"\n}\n\nfunc (f *SyncBranchFixer) Fix(ctx context.Context, issue *CheckResult) error {\n // Reset to remote or create branch\n return syncbranch.ResetToRemote(ctx, repoRoot, branch, jsonlPath)\n}\n```\n\n**cmd/bd/doctor/fix/merge_driver.go**\n```go\ntype MergeDriverFixer struct{}\n\nfunc (f *MergeDriverFixer) CanFix(name string) bool {\n return name == \"merge-driver-missing\" || name == \"merge-driver-outdated\"\n}\n\nfunc (f *MergeDriverFixer) Fix(ctx context.Context, issue *CheckResult) error {\n return setupMergeDriver()\n}\n```\n\n### 4. Update doctor run logic\n\n```go\nfunc runDoctor(cmd *cobra.Command, args []string) {\n issues := runAllChecks()\n \n if \\!fixFlag {\n // Existing behavior - just display issues\n displayIssues(issues)\n return\n }\n \n // Collect fixable issues\n var fixable []FixableIssue\n for _, issue := range issues {\n if fixer := fix.GetFixer(issue.CheckName); fixer \\!= nil {\n fixable = append(fixable, FixableIssue{issue, fixer})\n }\n }\n \n if len(fixable) == 0 {\n fmt.Println(\"No automatically fixable issues found\")\n return\n }\n \n // Show what will be fixed\n fmt.Printf(\"Found %d fixable issues:\\n\", len(fixable))\n for i, f := range fixable {\n fmt.Printf(\" %d. [%s] %s\\n\", i+1, f.Issue.CheckName, f.Fixer.Description())\n }\n \n // Confirm unless --yes\n if \\!yesFlag {\n fmt.Print(\"\\nProceed with fixes? [Y/n] \")\n // ... read confirmation\n }\n \n // Apply fixes\n for _, f := range fixable {\n fmt.Printf(\"Fixing %s... \", f.Issue.CheckName)\n if err := f.Fixer.Fix(ctx, f.Issue); err \\!= nil {\n fmt.Printf(\"FAILED: %v\\n\", err)\n } else {\n fmt.Println(\"OK\")\n }\n }\n}\n```\n\n## Fixable Checks (Initial Set)\n\n| Check | Fixer | Action |\n|-------|-------|--------|\n| git-hooks | HooksFixer | Reinstall hooks |\n| hooks-outdated | HooksFixer | Update hooks |\n| merge-driver-missing | MergeDriverFixer | Configure merge driver |\n| sync-branch-diverged | SyncBranchFixer | Reset to remote |\n| daemon-version-mismatch | DaemonFixer | Restart daemon |\n\n## Testing\n```bash\n# Test with broken hooks\nrm .git/hooks/pre-commit\nbd doctor --fix --yes\n\n# Verify fix applied\nbd doctor # Should pass now\n```\n\n## Success Criteria\n- --fix flag triggers automatic repair\n- User prompted for confirmation (unless --yes)\n- Clear output showing what was fixed\n- Graceful handling of fix failures\n- At least 5 common issues auto-fixable","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-14T18:17:48.411264-08:00","updated_at":"2025-12-23T13:34:05.646445-08:00","closed_at":"2025-12-23T13:34:05.646445-08:00","dependencies":[{"issue_id":"bd-ykd9","depends_on_id":"bd-iz5t","type":"parent-child","created_at":"2025-12-23T12:44:07.732505-08:00","created_by":"daemon"}]} {"id":"bd-ykqu","title":"Add gate timeout tracking and notification","description":"Implement timeout and notification logic for gates.\n\n## Timeout Behavior\n1. Gate created with timeout (e.g., 30m)\n2. Deacon tracks elapsed time during patrol\n3. If timeout reached:\n - Notify all waiters: \"Gate timed out\"\n - Close gate with timeout reason\n - Waiter can retry, escalate, or fail gracefully\n\n## Notification\n- Use gt mail send to notify waiters\n- Include gate ID, await type, and reason in message\n- Support multiple waiters notification\n\n## Escalation Path\n- Witness sees stuck worker, nudges them\n- Worker can escalate to human if needed","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-23T11:44:40.1825-08:00","updated_at":"2025-12-23T12:19:44.362527-08:00","closed_at":"2025-12-23T12:19:44.362527-08:00","dependencies":[{"issue_id":"bd-ykqu","depends_on_id":"bd-udsi","type":"parent-child","created_at":"2025-12-23T11:44:53.072862-08:00","created_by":"daemon"},{"issue_id":"bd-ykqu","depends_on_id":"bd-is6m","type":"blocks","created_at":"2025-12-23T11:44:56.595085-08:00","created_by":"daemon"}]} {"id":"bd-ym05l","title":"Session ended: gt-beads-crew-wolf","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-07T20:42:58.763079-08:00","created_by":"beads/crew/wolf","updated_at":"2026-01-07T20:42:58.7968-08:00","closed_at":"2026-01-07T20:42:58.7968-08:00","close_reason":"auto-closed session event"} {"id":"bd-ymj","title":"Export doesn't update last_import_hash metadata causing perpetual 'JSONL content has changed' errors","description":"After a successful export, the daemon doesn't update last_import_hash or last_import_mtime metadata. This causes hasJSONLChanged to return true on the next export attempt, blocking with 'refusing to export: JSONL content has changed since last import'.\n\nRelated to GH #334.\n\nScenario:\n1. Daemon exports successfully → JSONL updated, hash changes\n2. Metadata NOT updated (last_import_hash still points to old hash)\n3. Next mutation triggers export\n4. validatePreExport calls hasJSONLChanged\n5. hasJSONLChanged sees current JSONL hash != last_import_hash\n6. Export blocked with 'JSONL content has changed since last import'\n7. Issue stuck: can't export, can't make progress\n\nThis creates a catch-22 where the system thinks JSONL changed externally when it was the daemon itself that changed it.\n\nCurrent behavior:\n- Import updates metadata (import.go:310-336)\n- Export does NOT update metadata (daemon_sync.go:307)\n- Result: metadata becomes stale after every export","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-21T10:05:34.871333-05:00","updated_at":"2025-11-22T14:57:44.56458844-05:00","closed_at":"2025-11-21T15:09:04.016651-05:00","dependencies":[{"issue_id":"bd-ymj","depends_on_id":"bd-dvd","type":"related","created_at":"2025-11-21T10:06:11.462508-05:00","created_by":"daemon"}]} {"id":"bd-ymqn","title":"Code review: bd mol bond --ref and bd activity (bd-xo1o work)","description":"Review dave's recent commits for bd-xo1o (Dynamic Molecule Bonding):\n\n## Commits to Review\n- ee04b1ea: feat: add dynamic molecule bonding with --ref flag (bd-xo1o.1)\n- be520d90: feat: add bd activity command for real-time state feed (bd-xo1o.3)\n\n## Review Focus\n1. Code quality and correctness\n2. Error handling\n3. Edge cases\n4. Test coverage\n5. Documentation\n\n## Deliverables\n- File beads for any issues found\n- Note any concerns or suggestions\n- Verify the implementation matches the bd-xo1o epic requirements","status":"closed","priority":1,"issue_type":"task","created_at":"2025-12-23T03:47:55.217363-08:00","updated_at":"2025-12-23T04:11:00.226326-08:00","closed_at":"2025-12-23T04:11:00.226326-08:00"} -{"id":"bd-ypbad","title":"Merge: opal-mk900yed","description":"branch: polecat/opal-mk900yed\ntarget: main\nsource_issue: opal-mk900yed\nrig: beads\nagent_bead: bd-beads-polecat-opal\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"open","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:00.30685-08:00","created_by":"beads/polecats/opal","updated_at":"2026-01-10T21:03:00.30685-08:00","labels":["gt:merge-request"]} +{"id":"bd-ypbad","title":"Merge: opal-mk900yed","description":"branch: polecat/opal-mk900yed\ntarget: main\nsource_issue: opal-mk900yed\nrig: beads\nagent_bead: bd-beads-polecat-opal\nretry_count: 0\nlast_conflict_sha: null\nconflict_task_id: null","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T21:03:00.30685-08:00","created_by":"beads/polecats/opal","updated_at":"2026-01-10T21:53:10.597848-08:00","closed_at":"2026-01-10T21:53:10.597848-08:00","close_reason":"Branch no longer exists on remote","labels":["gt:merge-request"]} {"id":"bd-ypvj","title":"Fix sync.remote config not being respected (GH#872)","description":"bd config set sync.remote \u003cname\u003e sets the value but bd sync still tries to use 'origin'. Need to check where the sync code reads the remote name and ensure it uses the configured value.","status":"closed","priority":1,"issue_type":"bug","assignee":"beads/crew/dave","created_at":"2026-01-03T13:12:50.777534-08:00","created_by":"beads/crew/grip","updated_at":"2026-01-03T13:24:46.723563-08:00","closed_at":"2026-01-03T13:24:46.723563-08:00","close_reason":"Fixed: gitPull/gitPush now respect sync.remote config (GH#872)"} {"id":"bd-yqhh","title":"bd list --parent: filter by parent issue","description":"Add --parent flag to bd list to filter issues by parent.\n\nExample:\n```bash\nbd list --parent=gt-h5n --status=open\n```\n\nWould show all open children of gt-h5n.\n\nUseful for:\n- Checking epic progress\n- Finding swarmable work within an epic\n- Molecule step listing","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-12-23T01:51:26.830952-08:00","updated_at":"2025-12-23T02:10:12.909803-08:00","closed_at":"2025-12-23T02:10:12.909803-08:00"} {"id":"bd-yr0fq","title":"Session ended: gt-beads-crew-emma","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-08T21:12:13.764395-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T21:12:13.80363-08:00","closed_at":"2026-01-08T21:12:13.80363-08:00","close_reason":"auto-closed session event"} @@ -1985,6 +1992,7 @@ {"id":"bd-ziy5","title":"GH#409: bd init uses issues.jsonl but docs say beads.jsonl","description":"bd init creates config referencing issues.jsonl but README/docs reference beads.jsonl as canonical. Standardize naming. See GitHub issue #409.","status":"tombstone","priority":2,"issue_type":"bug","created_at":"2025-12-16T01:03:58.109954-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"} {"id":"bd-zj8e","title":"Performance Testing Documentation","description":"Create docs/performance-testing.md documenting the performance testing framework.\n\nSections:\n1. Overview - What the framework does, goals\n2. Running Benchmarks\n - make bench command\n - Running specific benchmarks\n - Interpreting output (ns/op, allocs/op)\n3. Profiling and Analysis\n - Viewing CPU profiles with pprof\n - Reading flamegraphs\n - Memory profiling\n - Finding hotspots\n4. User Diagnostics\n - bd doctor --perf usage\n - Sharing profiles with bug reports\n - Understanding the report output\n5. Comparing Performance\n - Using benchstat for before/after comparisons\n - Detecting regressions\n6. Tips for Optimization\n - Common patterns\n - When to profile vs benchmark\n\nStyle:\n- Concise, practical examples\n- Screenshots/examples of pprof output\n- Clear command-line examples\n- Focus on workflow, not theory","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-13T22:23:38.99897-08:00","updated_at":"2025-12-09T18:38:37.709875872-05:00","closed_at":"2025-11-28T23:37:52.227831-08:00"} {"id":"bd-zkl","title":"Add tests for daemon vs non-daemon parity in list filters","description":"After bd-o43 RPC integration, we need tests to verify daemon mode behaves identically to direct mode for all new filter flags.\n\nTest coverage needed:\n- Pattern matching: --title-contains, --desc-contains, --notes-contains\n- Date ranges: all 6 date filter flags (created/updated/closed after/before)\n- Empty/null checks: --empty-description, --no-assignee, --no-labels\n- Priority ranges: --priority-min, --priority-max\n- Status normalization: --status all vs no status flag\n- Date parsing: YYYY-MM-DD, RFC3339, and error cases\n- Backward compat: deprecated --label flag still works\n\nOracle review findings (bd-o43):\n- Date parsing should support multiple formats\n- Status 'all' should be treated as unset\n- NoLabels field was missing from RPC protocol\n- Error messages should be clear and actionable\n\nTest approach:\n- Create RPC integration tests in internal/rpc/server_issues_epics_test.go\n- Compare daemon client.List() vs direct store.SearchIssues() for same filters\n- Verify error messages match between modes\n- Test with real daemon instance, not just unit tests","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T00:43:53.369457-08:00","updated_at":"2025-11-05T00:55:31.318526-08:00","closed_at":"2025-11-05T00:55:31.318526-08:00","dependencies":[{"issue_id":"bd-zkl","depends_on_id":"bd-o43","type":"discovered-from","created_at":"2025-11-05T00:43:53.371274-08:00","created_by":"daemon"}]} +{"id":"bd-zl8zr","title":"Digest: mol-refinery-patrol","description":"Patrol: MQ empty, synced main to a731f5a4 (5 commits), no merges","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-10T22:54:02.689607-08:00","updated_at":"2026-01-10T22:54:02.689607-08:00","closed_at":"2026-01-10T22:54:02.689567-08:00","close_reason":"Squashed from 11 wisps","dependencies":[{"issue_id":"bd-zl8zr","depends_on_id":"bd-wisp-c3g","type":"parent-child","created_at":"2026-01-10T22:54:02.690431-08:00","created_by":"beads/refinery"}]} {"id":"bd-zlef","title":"bd repair command: fix orphaned foreign key refs","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-12-29T12:31:11.881702-08:00","created_by":"stevey","updated_at":"2025-12-29T12:33:47.159658-08:00","closed_at":"2025-12-29T12:33:47.159658-08:00"} {"id":"bd-zmmy","title":"bd ready resolves external dependencies","description":"Extend bd ready to check external blocked_by references:\n\n1. Parse external:\u003cproject\u003e:\u003ccapability\u003e from blocked_by\n2. Look up project path from external_projects config\n3. Check if target project has provides:\u003ccapability\u003e label on a closed issue\n4. If not satisfied, issue is blocked\n\nExample output:\n```bash\nbd ready\n# gt-xyz: blocked by external:beads:mol-run-assignee (not provided)\n# gt-abc: ready\n```\n\nDepends on: bd-om4a (external: prefix), bd-66w1 (config)\n\nPart of cross-project dependency system.\nSee: gastown/docs/cross-project-deps.md","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-12-21T22:37:50.03794-08:00","updated_at":"2025-12-21T23:42:25.042402-08:00","closed_at":"2025-12-21T23:42:25.042402-08:00","dependencies":[{"issue_id":"bd-zmmy","depends_on_id":"bd-om4a","type":"blocks","created_at":"2025-12-21T22:38:38.106657-08:00","created_by":"daemon"},{"issue_id":"bd-zmmy","depends_on_id":"bd-66w1","type":"blocks","created_at":"2025-12-21T22:38:38.175633-08:00","created_by":"daemon"}]} {"id":"bd-znyw","title":"Change default JSONL filename from beads.jsonl back to issues.jsonl throughout codebase","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-21T23:27:07.137649-08:00","updated_at":"2025-11-21T23:34:05.029974-08:00","closed_at":"2025-11-21T23:34:05.029974-08:00"}