migrated bootup instructions to AGENTS.md
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AGENTS.md
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# Instructions for AI Agents Working on Beads
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## Project Overview
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This is **beads** (command: `bd`), an issue tracker designed for AI-supervised coding workflows. We dogfood our own tool!
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## Issue Tracking
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We use bd (beads) for issue tracking instead of Markdown TODOs or external tools.
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### Quick Reference
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```bash
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# Find ready work (no blockers)
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bd ready --json
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# Create new issue
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bd create "Issue title" -t bug|feature|task -p 0-4 -d "Description" --json
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# Create with explicit ID (for parallel workers)
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bd create "Issue title" --id worker1-100 -p 1 --json
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# Create multiple issues from markdown file
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bd create -f feature-plan.md --json
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# Update issue status
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bd update <id> --status in_progress --json
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# Link discovered work (old way)
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bd dep add <discovered-id> <parent-id> --type discovered-from
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# Create and link in one command (new way)
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bd create "Issue title" -t bug -p 1 --deps discovered-from:<parent-id> --json
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# Complete work
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bd close <id> --reason "Done" --json
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# Show dependency tree
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bd dep tree <id>
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# Get issue details
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bd show <id> --json
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# Import with collision detection
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bd import -i .beads/issues.jsonl --dry-run # Preview only
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bd import -i .beads/issues.jsonl --resolve-collisions # Auto-resolve
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```
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### Workflow
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1. **Check for ready work**: Run `bd ready` to see what's unblocked
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2. **Claim your task**: `bd update <id> --status in_progress`
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3. **Work on it**: Implement, test, document
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4. **Discover new work**: If you find bugs or TODOs, create issues:
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- Old way (two commands): `bd create "Found bug in auth" -t bug -p 1 --json` then `bd dep add <new-id> <current-id> --type discovered-from`
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- New way (one command): `bd create "Found bug in auth" -t bug -p 1 --deps discovered-from:<current-id> --json`
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5. **Complete**: `bd close <id> --reason "Implemented"`
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6. **Export**: Changes auto-sync to `.beads/issues.jsonl` (5-second debounce)
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### Issue Types
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- `bug` - Something broken that needs fixing
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- `feature` - New functionality
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- `task` - Work item (tests, docs, refactoring)
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- `epic` - Large feature composed of multiple issues
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- `chore` - Maintenance work (dependencies, tooling)
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### Priorities
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- `0` - Critical (security, data loss, broken builds)
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- `1` - High (major features, important bugs)
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- `2` - Medium (nice-to-have features, minor bugs)
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- `3` - Low (polish, optimization)
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- `4` - Backlog (future ideas)
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### Dependency Types
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- `blocks` - Hard dependency (issue X blocks issue Y)
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- `related` - Soft relationship (issues are connected)
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- `parent-child` - Epic/subtask relationship
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- `discovered-from` - Track issues discovered during work
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Only `blocks` dependencies affect the ready work queue.
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## Development Guidelines
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### Code Standards
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- **Go version**: 1.21+
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- **Linting**: `golangci-lint run ./...` (baseline warnings documented in LINTING.md)
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- **Testing**: All new features need tests (`go test ./...`)
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- **Documentation**: Update relevant .md files
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### File Organization
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```
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beads/
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├── cmd/bd/ # CLI commands
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├── internal/
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│ ├── types/ # Core data types
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│ └── storage/ # Storage layer
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│ └── sqlite/ # SQLite implementation
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├── examples/ # Integration examples
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└── *.md # Documentation
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```
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### Before Committing
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1. **Run tests**: `go test ./...`
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2. **Run linter**: `golangci-lint run ./...` (ignore baseline warnings)
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3. **Update docs**: If you changed behavior, update README.md or other docs
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4. **Commit**: Issues auto-sync to `.beads/issues.jsonl` and import after pull
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### Git Workflow
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**Auto-sync is now automatic!** bd automatically:
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- **Exports** to JSONL after any CRUD operation (5-second debounce)
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- **Imports** from JSONL when it's newer than DB (e.g., after `git pull`)
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```bash
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# Make changes and create/update issues
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bd create "Fix bug" -p 1
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bd update bd-42 --status in_progress
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# JSONL is automatically updated after 5 seconds
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# Commit (JSONL is already up-to-date)
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git add .
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git commit -m "Your message"
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# After pull - JSONL is automatically imported
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git pull # bd commands will auto-import the updated JSONL
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bd ready # Fresh data from git!
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```
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**Optional**: Use the git hooks in `examples/git-hooks/` for immediate export (no 5-second wait) and guaranteed import after git operations. Not required with auto-sync enabled.
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### Handling Import Collisions
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When merging branches or pulling changes, you may encounter ID collisions (same ID, different content). bd detects and safely handles these:
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**Check for collisions after merge:**
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```bash
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# After git merge or pull
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bd import -i .beads/issues.jsonl --dry-run
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# Output shows:
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# === Collision Detection Report ===
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# Exact matches (idempotent): 15
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# New issues: 5
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# COLLISIONS DETECTED: 3
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#
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# Colliding issues:
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# bd-10: Fix authentication (conflicting fields: [title, priority])
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# bd-12: Add feature (conflicting fields: [description, status])
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```
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**Resolve collisions automatically:**
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```bash
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# Let bd resolve collisions by remapping incoming issues to new IDs
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bd import -i .beads/issues.jsonl --resolve-collisions
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# bd will:
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# - Keep existing issues unchanged
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# - Assign new IDs to colliding issues (bd-25, bd-26, etc.)
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# - Update ALL text references and dependencies automatically
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# - Report the remapping with reference counts
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```
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**Important**: The `--resolve-collisions` flag is safe and recommended for branch merges. It preserves the existing database and only renumbers the incoming colliding issues. All text mentions like "see bd-10" and dependency links are automatically updated to use the new IDs.
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**Manual resolution** (alternative):
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If you prefer manual control, resolve the Git conflict in `.beads/issues.jsonl` directly, then import normally without `--resolve-collisions`.
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## Current Project Status
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Run `bd stats` to see overall progress.
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### Active Areas
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- **Core CLI**: Mature, but always room for polish
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- **Examples**: Growing collection of agent integrations
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- **Documentation**: Comprehensive but can always improve
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- **MCP Server**: Implemented at `integrations/beads-mcp/` with Claude Code plugin
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- **Migration Tools**: Planned (see bd-6)
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### 1.0 Milestone
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We're working toward 1.0. Key blockers tracked in bd. Run:
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```bash
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bd dep tree bd-8 # Show 1.0 epic dependencies
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```
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## Common Tasks
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### Adding a New Command
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1. Create file in `cmd/bd/`
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2. Add to root command in `cmd/bd/main.go`
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3. Implement with Cobra framework
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4. Add `--json` flag for agent use
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5. Add tests in `cmd/bd/*_test.go`
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6. Document in README.md
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### Adding Storage Features
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1. Update schema in `internal/storage/sqlite/schema.go`
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2. Add migration if needed
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3. Update `internal/types/types.go` if new types
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4. Implement in `internal/storage/sqlite/sqlite.go`
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5. Add tests
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6. Update export/import in `cmd/bd/export.go` and `cmd/bd/import.go`
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### Adding Examples
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1. Create directory in `examples/`
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2. Add README.md explaining the example
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3. Include working code
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4. Link from `examples/README.md`
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5. Mention in main README.md
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## Questions?
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- Check existing issues: `bd list`
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- Look at recent commits: `git log --oneline -20`
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- Read the docs: README.md, TEXT_FORMATS.md, EXTENDING.md
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- Create an issue if unsure: `bd create "Question: ..." -t task -p 2`
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## Important Files
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- **README.md** - Main documentation (keep this updated!)
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- **EXTENDING.md** - Database extension guide
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- **TEXT_FORMATS.md** - JSONL format analysis
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- **CONTRIBUTING.md** - Contribution guidelines
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- **SECURITY.md** - Security policy
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## Pro Tips for Agents
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- Always use `--json` flags for programmatic use
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- Link discoveries with `discovered-from` to maintain context
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- Check `bd ready` before asking "what next?"
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- Auto-sync is automatic! JSONL updates after CRUD ops, imports after git pull
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- Use `--no-auto-flush` or `--no-auto-import` to disable automatic sync if needed
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- Use `bd dep tree` to understand complex dependencies
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- Priority 0-1 issues are usually more important than 2-4
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- Use `--dry-run` to preview import collisions before resolving
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- Use `--resolve-collisions` for safe automatic branch merges
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- Use `--id` flag with `bd create` to partition ID space for parallel workers (e.g., `worker1-100`, `worker2-500`)
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## Building and Testing
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```bash
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# Build
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go build -o bd ./cmd/bd
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# Test
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go test ./...
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# Test with coverage
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go test -coverprofile=coverage.out ./...
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go tool cover -html=coverage.out
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# Run locally
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./bd init --prefix test
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./bd create "Test issue" -p 1
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./bd ready
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```
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## Version Management
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**IMPORTANT**: When the user asks to "bump the version" or mentions a new version number (e.g., "bump to 0.9.3"), use the version bump script:
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```bash
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# Preview changes (shows diff, doesn't commit)
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./scripts/bump-version.sh 0.9.3
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# Auto-commit the version bump
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./scripts/bump-version.sh 0.9.3 --commit
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git push origin main
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```
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**What it does:**
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- Updates ALL version files (CLI, plugin, MCP server, docs) in one command
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- Validates semantic versioning format
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- Shows diff preview
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- Verifies all versions match after update
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- Creates standardized commit message
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**User will typically say:**
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- "Bump to 0.9.3"
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- "Update version to 1.0.0"
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- "Rev the project to 0.9.4"
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- "Increment the version"
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**You should:**
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1. Run `./scripts/bump-version.sh <version> --commit`
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2. Push to GitHub
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3. Confirm all versions updated correctly
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**Files updated automatically:**
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- `cmd/bd/version.go` - CLI version
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- `.claude-plugin/plugin.json` - Plugin version
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- `.claude-plugin/marketplace.json` - Marketplace version
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- `integrations/beads-mcp/pyproject.toml` - MCP server version
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- `README.md` - Documentation version
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- `PLUGIN.md` - Version requirements
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**Why this matters:** We had version mismatches (bd-66) when only `version.go` was updated. This script prevents that by updating all components atomically.
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See `scripts/README.md` for more details.
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## Release Process (Maintainers)
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1. Bump version with `./scripts/bump-version.sh <version> --commit`
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2. Update CHANGELOG.md with release notes
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3. Run full test suite: `go test ./...`
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4. Push version bump: `git push origin main`
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5. Tag release: `git tag v<version>`
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6. Push tag: `git push origin v<version>`
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7. GitHub Actions handles the rest
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---
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**Remember**: We're building this tool to help AI agents like you! If you find the workflow confusing or have ideas for improvement, create an issue with your feedback.
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Happy coding! 🔗
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