Steve Yegge
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5e971bd90a
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docs: add molecular chemistry documentation (bd-ul59)
Create docs/MOLECULES.md with comprehensive coverage of:
- Layer cake architecture (formulas → protos → molecules → epics → issues)
- Phase metaphor (solid/proto, liquid/mol, vapor/wisp)
- Phase transitions (pour, wisp create, squash, burn)
- Bonding patterns (proto+proto, proto+mol, mol+mol)
- Agent pitfalls (temporal language, forgetting to squash)
- Orphan vs stale matrix
- Progress tracking (computed, not stored)
- Parallelism model (default parallel, opt-in sequential)
Update CLI_REFERENCE.md with Molecular Chemistry section covering:
- Proto/template commands
- Pour command
- Wisp commands
- Bonding commands
- Squash and burn commands
Update ARCHITECTURE.md with cross-reference to new MOLECULES.md.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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2025-12-24 19:31:14 -08:00 |
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