Add two new RPC endpoints to allow CLI commands to work in daemon mode:
1. GetConfig (OpGetConfig) - Retrieves config values from the daemon database.
Used by bd create to validate issue prefix in daemon mode.
2. MolStale (OpMolStale) - Finds stale molecules (complete-but-unclosed
epics). Used by bd mol stale command in daemon mode.
Changes:
- internal/rpc/protocol.go: Add operation constants and request/response types
- internal/rpc/client.go: Add client methods GetConfig() and MolStale()
- internal/rpc/server_issues_epics.go: Add handler implementations
- internal/rpc/server_routing_validation_diagnostics.go: Register handlers
- cmd/bd/create.go: Use GetConfig RPC instead of skipping validation
- cmd/bd/mol_stale.go: Use MolStale RPC instead of requiring --no-daemon
- internal/rpc/coverage_test.go: Add tests for new endpoints
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Strip (bd-xxx), (gt-xxx) suffixes from code comments and changelog
entries. The descriptions remain meaningful without the ephemeral
issue IDs.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Analysis found these commands are dead code:
- gt never calls `bd pin` - uses `bd update --status=pinned` instead
- Beads.Pin() wrapper exists but is never called
- bd hook functionality duplicated by gt mol status
- Code comment says "pinned field is cosmetic for bd hook visibility"
Removed:
- cmd/bd/pin.go
- cmd/bd/unpin.go
- cmd/bd/hook.go
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
* feat(ready,blocked): Add --parent flag for scoping by epic/bead descendants
Add --parent flag to `bd ready` and `bd blocked` CLI commands and MCP tools
to filter results to all descendants of a specific epic or bead.
## Backward Compatibility
- CLI: New optional --parent flag; existing usage unchanged
- RPC: New `blocked` operation added (was missing); existing operations unchanged
- MCP: New optional `parent` parameter; existing calls work as before
- Storage interface: GetBlockedIssues signature changed to accept WorkFilter
- All callers updated to pass empty filter for existing behavior
- Empty WorkFilter{} returns identical results to previous implementation
## Implementation Details
SQLite uses recursive CTE to traverse parent-child hierarchy:
WITH RECURSIVE descendants AS (
SELECT issue_id FROM dependencies
WHERE type = 'parent-child' AND depends_on_id = ?
UNION ALL
SELECT d.issue_id FROM dependencies d
JOIN descendants dt ON d.depends_on_id = dt.issue_id
WHERE d.type = 'parent-child'
)
SELECT issue_id FROM descendants
MemoryStorage implements equivalent recursive traversal with visited-set
cycle protection via collectDescendants helper.
Parent filter composes with existing filters (priority, labels, assignee, etc.)
as an additional WHERE clause - all filters are AND'd together.
## RPC Blocked Support
MCP beads_blocked() existed but daemon client raised NotImplementedError.
Added OpBlocked and handleBlocked to enable daemon RPC path, which was
previously broken. Now both CLI and daemon clients work for blocked queries.
## Changes
- internal/types/types.go: Add ParentID *string to WorkFilter
- internal/storage/sqlite/ready.go: Add recursive CTE for parent filtering
- internal/storage/memory/memory.go: Add getAllDescendants/collectDescendants
- internal/storage/storage.go: Update GetBlockedIssues interface signature
- cmd/bd/ready.go: Add --parent flag to ready and blocked commands
- internal/rpc/protocol.go: Add OpBlocked constant and BlockedArgs type
- internal/rpc/server_issues_epics.go: Add handleBlocked RPC handler
- internal/rpc/client.go: Add Blocked client method
- integrations/beads-mcp/: Add BlockedParams model and parent parameter
## Usage
bd ready --parent bd-abc # All ready descendants
bd ready --parent bd-abc --priority 1 # Combined with other filters
bd blocked --parent bd-abc # All blocked descendants
## Testing
Added 4 test cases for parent filtering:
- TestParentIDFilterDescendants: Verifies recursive traversal (grandchildren)
- TestParentIDWithOtherFilters: Verifies composition with priority filter
- TestParentIDWithBlockedDescendants: Verifies blocked issues excluded from ready
- TestParentIDEmptyParent: Verifies empty result for childless parent
* fix: Correct blockedCmd indentation and suppress gosec false positive
- Fix syntax error from incorrect indentation in blockedCmd Run function
- Add nolint:gosec comment for GetBlockedIssues SQL formatting (G201)
The filterSQL variable contains only parameterized WHERE clauses with
? placeholders, not user input
New RPC endpoint to get detailed progress for a molecule (parent issue
with child steps). Returns moleculeID, title, assignee, and list of
steps with their status (done/current/ready/blocked) and timestamps.
Used when user expands a worker in the activity feed TUI.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
New RPC endpoint to get all workers and their current molecule/step in one call.
Returns: assignee, moleculeID, moleculeTitle, currentStep, totalSteps, stepTitle,
lastActivity, status. Enables activity feed TUI to show worker state without
multiple round trips.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Add gate operation constants (OpGateCreate, OpGateList, OpGateShow,
OpGateClose, OpGateWait) to protocol.go
- Add Gate*Args and Gate*Result types to protocol.go
- Add gate handler methods (handleGateCreate, handleGateList,
handleGateShow, handleGateClose, handleGateWait) to server_issues_epics.go
- Register gate handlers in handleRequest switch
- Add gate client methods (GateCreate, GateList, GateShow, GateClose,
GateWait) to client.go
- Update cmd/bd/gate.go to use daemon client when available, falling
back to direct store access
Gate commands now work with the daemon, eliminating the need for
--no-daemon flag.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add --auto-pull flag to control whether the daemon periodically pulls from
remote to check for updates from other clones.
Configuration precedence:
1. --auto-pull CLI flag (highest)
2. BEADS_AUTO_PULL environment variable
3. daemon.auto_pull in database config
4. Default: true when sync.branch is configured
When auto_pull is enabled, the daemon creates a remoteSyncTicker that
periodically calls doAutoImport() to pull remote changes. When disabled,
users must manually run 'git pull' to sync remote changes.
Changes:
- cmd/bd/daemon.go: Add --auto-pull flag and config reading logic
- cmd/bd/daemon_event_loop.go: Gate remoteSyncTicker on autoPull parameter
- cmd/bd/daemon_lifecycle.go: Add auto-pull to status output and spawn args
- internal/rpc/protocol.go: Add AutoPull field to StatusResponse
- internal/rpc/server_core.go: Add autoPull to Server struct and SetConfig
- internal/rpc/server_routing_validation_diagnostics.go: Include in status
- Tests updated to pass autoPull parameter
Closes #TBD
Add auto-commit, auto-push, local mode, sync interval, and daemon mode
to the status output when querying a running daemon.
This helps users understand the current daemon configuration without
having to check logs or remember what flags were used at startup.
Changes:
- Add config fields to StatusResponse in protocol.go
- Add SetConfig() method to Server for daemon to set its config
- Update handleStatus() to include config in response
- Update showDaemonStatus() to query and display config via RPC
- Add comprehensive test coverage for new functionality
Co-authored-by: Christian Catalan <crcatala@gmail.com>
Enable daemon RPC support for delete operations to trigger auto-sync.
This PR adds delete operation support to the RPC daemon, ensuring that delete operations emit mutation events and trigger auto-sync like other mutating operations.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Implements a new 'bd count' command that provides efficient issue counting
with filtering and grouping capabilities.
Features:
- Basic count: Returns total count of issues matching filters
- All filtering options from 'bd list' (status, priority, type, assignee, labels, dates, etc.)
- Grouping via --by-* flags: status, priority, type, assignee, label
- JSON output support for both simple and grouped counts
- Both daemon and direct mode support
Implementation:
- Added OpCount operation and CountArgs to RPC protocol
- Added Count() method to RPC client
- Implemented handleCount() server-side handler with optimized bulk label fetching
- Created cmd/bd/count.go with full CLI implementation
Performance optimization:
- Pre-fetches all labels in a single query when using --by-label to avoid N+1 queries
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
- Implement comprehensive schema probe in sqlite.New() that verifies all
expected tables and columns after migrations
- Add retry logic: if probe fails, retry migrations once
- Return clear fatal error with missing schema elements if probe still fails
- Enhance daemon version gating: refuse RPC if client has newer minor version
- Improve checkVersionMismatch messaging: verify schema before claiming upgrade
- Add schema compatibility check to bd doctor command
- Add comprehensive tests for schema probing
This prevents the silent migration failure bug where:
1. Migrations fail silently
2. Database queries fail with 'no such column' errors
3. Import logic misinterprets as 'not found' and tries INSERT
4. Results in cryptic UNIQUE constraint errors
Fixes#262
Amp-Thread-ID: https://ampcode.com/threads/T-0d7ae2c0-9f12-4f9b-85d1-1291488af150
Co-authored-by: Amp <amp@ampcode.com>
* bd sync: 2025-10-30 12:12:27
* Working on frontend
* bd sync: 2025-11-06 16:55:55
* feat: finish bd monitor human viewer
* Merge conflicts resolved and added tests
* bd sync: 2025-11-06 17:23:41
* bd sync: 2025-11-06 17:34:52
* feat: Add reload button and multiselect status filter to monitor
- Changed status filter from single select to multiselect with 'Open' selected by default
- Added reload button with visual feedback (hover/active states)
- Updated filterIssues() to handle multiple selected statuses
- Added reloadData() function that reloads both stats and issues
- Improved responsive design for mobile devices
- Filter controls now use flexbox layout with better spacing
* fix: Update monitor statistics to show Total, In Progress, Open, Closed
- Replaced 'Ready to Work' stat with 'In Progress' stat
- Reordered stats to show logical progression: Total -> In Progress -> Open -> Closed
- Updated loadStats() to fetch in-progress count from stats API
- Removed unnecessary separate API call for ready count
* fix: Correct API field names in monitor stats JavaScript
The JavaScript was using incorrect field names (stats.total, stats.by_status)
that don't match the actual types.Statistics struct which uses flat fields
with underscores (total_issues, in_progress_issues, etc).
Fixed by updating loadStats() to use correct field names:
- stats.total -> stats.total_issues
- stats.by_status?.['in-progress'] -> stats.in_progress_issues
- stats.by_status?.open -> stats.open_issues
- stats.by_status?.closed -> stats.closed_issues
Fixes beads-9
* bd sync: 2025-11-06 17:51:24
* bd sync: 2025-11-06 17:56:09
* fix: Make monitor require daemon to prevent SQLite locking
Implemented Option 1 from beads-eel: monitor now requires daemon and never
opens direct SQLite connection.
Changes:
- Added 'monitor' to noDbCommands list in main.go to skip normal DB initialization
- Added validateDaemonForMonitor() PreRun function that:
- Finds database path using beads.FindDatabasePath()
- Validates daemon is running and healthy
- Fails gracefully with clear error message if no daemon
- Only uses RPC connection, never opens SQLite directly
Benefits:
- Eliminates SQLite locking conflicts between monitor and daemon
- Users can now close/update issues via CLI while monitor runs
- Clear error messages guide users to start daemon first
Fixes beads-eel
* bd sync: 2025-11-06 18:03:50
* docs: Add bd daemons restart subcommand documentation
Added documentation for the 'bd daemons restart' subcommand across all documentation files:
- commands/daemons.md: Added full restart subcommand section with synopsis, description, arguments, flags, and examples
- README.md: Added restart examples to daemon management section
- AGENTS.md: Added restart examples with --json flag for agents
The restart command gracefully stops and starts a specific daemon by workspace path or PID,
useful after upgrading bd or when a daemon needs refreshing.
Fixes beads-11
* bd sync: 2025-11-06 18:13:16
* Separated the web ui from the general monitoring functionality
---------
Co-authored-by: Steve Yegge <stevey@sourcegraph.com>
Multiple CLI commands had a systematic bug where ResolveID responses were
incorrectly converted using string(resp.Data) instead of json.Unmarshal.
Since resp.Data is json.RawMessage (already JSON-encoded), this preserved
the JSON quotes, causing IDs to become "bd-1048" instead of bd-1048.
When re-marshaled for subsequent RPC calls, these became double-quoted
("\"bd-1048\""), causing database lookups to fail.
Bugs fixed:
1. Nil pointer dereference in handleShow - added nil check after GetIssue
2. Double JSON encoding in 12 locations across 4 commands:
- bd show (3 instances in show.go)
- bd dep add/remove/tree (5 instances in dep.go)
- bd label add/remove/list (3 instances in label.go)
- bd reopen (1 instance in reopen.go)
All instances replaced string(resp.Data) with proper json.Unmarshal.
Removed debug logging added during investigation.
Tested: All affected commands now work correctly with daemon mode.
- Replaced all getStorageForRequest(req) calls with direct s.storage access
- Updated 5 handler files: server_issues_epics.go (~8 calls), server_labels_deps_comments.go (~4 calls), server_compact.go (~2 calls), server_export_import_auto.go (~2 calls), server_routing_validation_diagnostics.go (~1 call)
- Only remaining references are in server_cache_storage.go (to be deleted in bd-33) and server_eviction_test.go (to be deleted in bd-34)
- Part of bd-29 epic to remove daemon storage cache
Amp-Thread-ID: https://ampcode.com/threads/T-239a5531-68a5-4c98-b85d-0e3512b2553c
Co-authored-by: Amp <amp@ampcode.com>