- Refactor bd onboard to output instructions instead of doing string replacement
- Leverage agent intelligence to naturally integrate bd into documentation
- Bootstrap via 'BEFORE ANYTHING ELSE: run bd onboard' in AGENTS.md
- Agent receives formatted instructions to update AGENTS.md and CLAUDE.md
- More agentic approach - adapts to existing project structure
- Update README with new bootstrap workflow
Amp-Thread-ID: https://ampcode.com/threads/T-d70fd1bf-8d44-48b6-bb55-5ae49efb23b8
Co-authored-by: Amp <amp@ampcode.com>
Add null safety checks in bd_daemon_client.py:
- list_issues(): Return empty array if issues_data is None
- ready(): Return empty array if issues_data is None
- stats(): Use empty dict if stats_data is None
This prevents TypeError crashes when daemon returns None/empty responses.
Amp-Thread-ID: https://ampcode.com/threads/T-072304c3-3a03-4091-92a9-9e16b4538227
Co-authored-by: Amp <amp@ampcode.com>
- Create LABELS.md with complete guide to label system
- Document label patterns, filtering, workflows, and best practices
- Add Labels section to README with examples
- Link LABELS.md in documentation section
- Close bd-159 and bd-163
Amp-Thread-ID: https://ampcode.com/threads/T-072304c3-3a03-4091-92a9-9e16b4538227
Co-authored-by: Amp <amp@ampcode.com>
- Add --label flag for AND filtering (must have ALL labels)
- Add --label-any flag for OR filtering (must have AT LEAST ONE label)
- Add normalizeLabels() helper to trim, dedupe, and clean inputs
- Fix RPC title filtering parity bug (forward via Query field)
- Add comprehensive tests for label filtering including combined AND+OR
- Update documentation in README and CHANGELOG
- Improve flag help text to clarify combined semantics
Closes bd-161
- Add workspace_root param to all MCP tool signatures (accepted but ignored)
- Fix where_am_i to accept workspace_root
- Fix set_context to always set env vars even when DB not found
- Allows init to work immediately after set_context
- Updated label CLI commands to support both daemon and direct modes
- Added label fetching to GetIssue() and scanIssues() methods
- All label operations (add, remove, list, list-all) work with daemon
- Closed bd-162 (label CLI commands), bd-166 (duplicate), bd-141 (daemon support)
Amp-Thread-ID: https://ampcode.com/threads/T-4858f62e-ad06-4cc7-ad05-17ee76861f86
Co-authored-by: Amp <amp@ampcode.com>
Add WaitReady() channel to RPC server that signals when the socket is
listening and ready to accept connections. Previously daemon startup
waited a fixed 2 seconds which could fail if the server took longer.
Changes:
- Add readyChan to Server struct
- Signal ready after listener bind completes
- Update daemon startup to wait on WaitReady() channel
- Increase timeout to 5s with proper signaling
This fixes multi-repo daemon routing test failures where daemon would
start but not be ready to handle requests within the timeout window.
Amp-Thread-ID: https://ampcode.com/threads/T-675a2db5-b1b3-480d-a108-b003d8139d08
Co-authored-by: Amp <amp@ampcode.com>
Clarify that using multiple MCP servers (beads-adar, beads-wyvern, etc)
causes workspace routing issues where AI may select wrong server.
Recommend single MCP server config that routes via global daemon based on
current working directory.
Fixes bd-164
Amp-Thread-ID: https://ampcode.com/threads/T-b3def94f-e784-4874-b65c-af5b87ad6cdd
Co-authored-by: Amp <amp@ampcode.com>
Fixes timestamp scanning error reported in GH-88 where DATETIME columns
were being returned as strings instead of time.Time on macOS 13.5.
Root cause: modernc.org/sqlite driver doesn't recognize mattn-style DSN
parameters (_journal_mode, _foreign_keys). When these incompatible
parameters are present, the driver ignores _time_format=sqlite on some
platforms, causing DATETIME values to remain as strings.
Solution: Use modernc's native _pragma syntax for all database options:
- Changed _journal_mode=WAL to _pragma=journal_mode(WAL)
- Changed _foreign_keys=ON to _pragma=foreign_keys(ON)
- Kept _pragma=busy_timeout(30000) and _time_format=sqlite
This ensures all parameters are properly recognized and DATETIME columns
are automatically parsed to time.Time across all platforms.
Fixes#88
Amp-Thread-ID: https://ampcode.com/threads/T-44d1817a-3709-4f1d-a27a-78bb2fa4d3dc
Co-authored-by: Amp <amp@ampcode.com>
Fixes bd-160
The race was between Start() writing s.listener and Stop() reading it.
Now all listener access is protected by the server mutex:
- Start() stores listener under lock after creation
- Accept loop reads listener under RLock
- Stop() closes listener under lock
All RPC tests now pass with -race flag.
- Add --max-depth/-d flag with default of 50
- Wire flag through to store.GetDependencyTree()
- Add input validation (must be >= 1)
- Show inline '… [truncated]' markers on truncated nodes
- Update truncation warning to show actual depth used
- Add comprehensive tests (truncation, default depth, boundary cases)
- Update CLI docs and reference
Thanks to @yashwanth-reddy909 for the initial implementation in PR #87.
This commit completes the feature with full wiring, validation, tests, and docs.
Amp-Thread-ID: https://ampcode.com/threads/T-c439b09c-cff2-48d9-8988-cf9353f0d32e
Co-authored-by: Amp <amp@ampcode.com>
Implemented bd-150: Improve daemon fallback visibility and user feedback
- Added DaemonStatus struct to track connection state
- Enhanced BD_DEBUG logging with detailed diagnostics and timing
- Added BD_VERBOSE mode with actionable warnings when falling back
- Implemented health checks before using daemon
- Clear fallback reasons: connect_failed, health_failed, auto_start_disabled, auto_start_failed, flag_no_daemon
- Updated documentation
Implemented bd-151: Add version compatibility checks for daemon RPC protocol
- Added ClientVersion field to RPC Request struct
- Client sends version (0.9.10) in all requests
- Server validates version compatibility using semver:
- Major version must match
- Daemon >= client for backward compatibility
- Clear error messages with directional hints (upgrade daemon vs upgrade client)
- Added ClientVersion and Compatible fields to HealthResponse
- Implemented 'bd version --daemon' command to check compatibility
- Fixed batch operations to propagate ClientVersion for proper checks
- Updated documentation with version compatibility section
Code review improvements:
- Propagate ClientVersion in batch sub-requests
- Directional error messages based on which side is older
- Made ServerVersion a var for future unification
Amp-Thread-ID: https://ampcode.com/threads/T-b5fe36b8-c065-44a9-a55b-582573671609
Co-authored-by: Amp <amp@ampcode.com>
- Refactored autoImportIfNewer() to use shared importIssuesCore()
- Removed ~200 lines of duplicated import logic from main.go
- Manual and auto-import now use identical collision detection/resolution
- Added auto-export scheduling after successful import (prevents JSONL drift)
- Optimized remapping notification (O(n) instead of O(n²), sorted output)
- Removed obsolete test functions for deleted helper functions
- Use bytes.NewReader instead of string conversion for better performance
Benefits:
- Future bug fixes only need to be made once
- Guaranteed consistency between manual and auto-import
- JSONL stays in sync with database after auto-import
- Clearer, more consistent user feedback
Amp-Thread-ID: https://ampcode.com/threads/T-1925a48d-ca8a-4b54-b4e7-de3ec755d25a
Co-authored-by: Amp <amp@ampcode.com>
- Implements bd stale command to show issues with execution_state where executor is dead/stopped
- Adds --release flag to automatically release orphaned issues
- Adds --threshold flag to customize heartbeat staleness threshold (default: 300s/5min)
- Handles missing executor instances (LEFT JOIN) for cases where executor was deleted
- Adds QueryContext and BeginTx helper methods to SQLiteStorage for advanced queries
- Fixes ExternalRef comparison bug in import_shared.go (pointer vs string)
- Removes unused imports in import.go
Resolves vc-124
- Implement shouldUseGlobalDaemon() with multi-repo detection
- Auto-detect 4+ beads repos and prefer global daemon
- Support BEADS_PREFER_GLOBAL_DAEMON env var for explicit control
- Add 'bd daemon --migrate-to-global' migration helper
- Update auto-start logic to use global daemon when appropriate
- Update documentation in AGENTS.md and README.md
Amp-Thread-ID: https://ampcode.com/threads/T-9af9372d-f3f3-4698-920d-e5ad1486d849
Co-authored-by: Amp <amp@ampcode.com>
- Register atexit handler to close daemon connections
- Add signal handlers for SIGTERM/SIGINT for graceful shutdown
- Implement cleanup() to close all daemon client connections
- Track daemon clients globally for cleanup
- Add close() method to BdDaemonClient (no-op since connections are per-request)
- Register client on first use via _get_client()
- Add comprehensive lifecycle tests
This prevents MCP server processes from accumulating without cleanup.
Each tool invocation will now properly clean up on exit.
Amp-Thread-ID: https://ampcode.com/threads/T-05d76b8e-dac9-472b-bfd0-afe10e3457cd
Co-authored-by: Amp <amp@ampcode.com>
Improvements based on oracle code review:
- Move socket cleanup AFTER lock acquisition (prevents unlinking live sockets)
- Add PID liveness check before removing stale socket
- Add stale lock detection with retry mechanism
- Tighten directory permissions to 0700 for security
- Improve socket readiness probing with shorter timeouts
- Make removeOldSocket() ignore ENOENT errors
Fixes race condition where socket could be removed during daemon startup window,
potentially orphaning a running daemon process.
Amp-Thread-ID: https://ampcode.com/threads/T-63542c60-b5b9-4a34-9f22-415d9d7e8223
Co-authored-by: Amp <amp@ampcode.com>
- Add OpHealth RPC operation to protocol
- Implement handleHealth() with DB ping and 1s timeout
- Returns status (healthy/degraded/unhealthy), uptime, cache metrics
- Update TryConnect() to use health check instead of ping
- Add 'bd daemon --health' CLI command with JSON output
- Track cache hits/misses for metrics
- Unhealthy daemon triggers automatic fallback to direct mode
- Health check completes in <2 seconds
Amp-Thread-ID: https://ampcode.com/threads/T-1a4889f3-77cf-433a-a704-e1c383929f48
Co-authored-by: Amp <amp@ampcode.com>
Implements bd-9: Allow users to view all paths through diamond dependencies
without deduplication. Useful for debugging complex dependency structures.
Changes:
- Added --show-all-paths flag to bd dep tree command
- Updated GetDependencyTree interface to accept showAllPaths parameter
- Modified deduplication logic to be conditional on flag
- Updated tests to pass new parameter
Amp-Thread-ID: https://ampcode.com/threads/T-43807dd5-8732-49ad-a839-cdb5dae70c35
Co-authored-by: Amp <amp@ampcode.com>
- bd-170: Implement hybrid sorting for ready work (recent 48h first, then oldest)
- bd-87: Use safer null-byte placeholders in ID remapping
- bd-92: Make auto-flush debounce configurable via BEADS_FLUSH_DEBOUNCE
- bd-171: Fix nil pointer dereference in renumber command
- Delete spurious test issues (bd-7, bd-130-134)
- Renumber database from 171 down to 144 issues
- Auto-starts daemon on first bd command (unless --no-daemon or BEADS_AUTO_START_DAEMON=false)
- Exponential backoff on failures: 5s, 10s, 20s, 40s, 80s, 120s (max)
- Lockfile prevents race conditions when multiple commands start daemon simultaneously
- Stdio redirected to /dev/null to prevent daemon output in foreground
- Uses os.Executable() for security (prevents PATH hijacking)
- Socket readiness verified with actual connection test
- Accepts multiple falsy values: false, 0, no, off (case-insensitive)
- Working directory set to database directory for local daemon context
- Comprehensive test coverage including backoff math and concurrent starts
Fixes:
- Closes bd-1 (won't fix - compaction keeps DBs small)
- Closes bd-124 (daemon auto-start implemented)
Documentation updated in README.md and AGENTS.md
Amp-Thread-ID: https://ampcode.com/threads/T-b10fe866-ab85-417f-9c4c-5d1f044c5796
Co-authored-by: Amp <amp@ampcode.com>
- bd-159: Global daemon now runs in routing mode without opening DB
- bd-158: Set socket permissions to 0600 for security
- bd-160: Reject --auto-commit/--auto-push with --global
- bd-157: Verified stale socket cleanup (already working)
- bd-56: Closed as won't-do (cycle prevention is better)
- bd-73: Multi-repo support complete
Implements bd-122: Document how to use beads across multiple projects
Added comprehensive multi-repo documentation:
- README.md: Global daemon section with architecture diagram
- AGENTS.md: MCP multi-repo configuration (global daemon + per-project)
- integrations/beads-mcp/README.md: BEADS_WORKING_DIR usage
- Mermaid diagram showing one daemon serving multiple repos
Documentation covers:
- Global daemon (bd daemon --global) for system-wide usage
- Per-project MCP instances with BEADS_WORKING_DIR
- Comparison table (local vs global)
- When to use each approach
- Example workflows for multi-project setups
Benefits of global daemon:
- One daemon process for all repos
- Automatic socket discovery (local -> global fallback)
- Better resource usage
- Per-request context routing to correct database
Amp-Thread-ID: https://ampcode.com/threads/T-ea606216-b886-4af0-bba8-56d000362d01
Co-authored-by: Amp <amp@ampcode.com>
The status filter was treating 'all' as a literal status value instead of
a special case meaning 'show all statuses'. This caused the SQL query to
filter for 'WHERE status = all' which matched no issues.
Fixed by checking if status is 'all' and skipping the filter in that case.
- Fix list.go to skip status filter when status == 'all'
- Update CHANGELOG with fix details
- All tests pass
- Add DeleteIssues() method in sqlite.go for atomic batch deletion
- Support multiple issue IDs as arguments or from file
- Add --from-file flag to read IDs from file (supports comments)
- Add --dry-run mode for safe preview without deleting
- Add --cascade flag for recursive deletion of dependents
- Add --force flag to orphan dependents instead of failing
- Pre-collect connected issues before deletion for text reference updates
- Add orphan deduplication to prevent duplicate IDs
- Add rows.Err() checks in all row iteration loops
- Full transaction safety - all deletions succeed or none do
- Comprehensive statistics tracking (deleted, dependencies, labels, events)
- Update README and CHANGELOG with batch deletion docs
Fixed critical code review issues:
- Dry-run mode now properly uses dryRun parameter instead of deleting data
- Text references are pre-collected before deletion so they update correctly
- Added orphan deduplication and error checks
- Updated defer rollback pattern per Go best practices
