13c362e67e
- Add dolt_mode, dolt_server_host, dolt_server_port fields to configfile.Config - Add IsDoltServerMode(), GetDoltServerHost(), GetDoltServerPort() helpers - Update factory to read server mode config and set Options accordingly - Skip bootstrap in server mode (database lives on server) - Pass Database name to dolt.Config for USE statement after connecting - Disable dolt stats collection to avoid lock issues in embedded mode This enables bd to connect to a running dolt sql-server (started via 'gt dolt start') instead of using embedded mode, allowing multi-client access without file locking conflicts. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
1058 lines
39 KiB
Go
1058 lines
39 KiB
Go
package main
|
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import (
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"context"
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"fmt"
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"os"
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"os/exec"
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"os/signal"
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"path/filepath"
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"runtime/pprof"
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"runtime/trace"
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"slices"
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"strings"
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"sync"
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"sync/atomic"
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"syscall"
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"time"
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"github.com/spf13/cobra"
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"github.com/steveyegge/beads/internal/beads"
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"github.com/steveyegge/beads/internal/config"
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"github.com/steveyegge/beads/internal/configfile"
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"github.com/steveyegge/beads/internal/debug"
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"github.com/steveyegge/beads/internal/hooks"
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"github.com/steveyegge/beads/internal/molecules"
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"github.com/steveyegge/beads/internal/rpc"
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"github.com/steveyegge/beads/internal/storage"
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"github.com/steveyegge/beads/internal/storage/factory"
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"github.com/steveyegge/beads/internal/storage/memory"
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"github.com/steveyegge/beads/internal/utils"
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)
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var (
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dbPath string
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actor string
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store storage.Storage
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jsonOutput bool
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daemonStatus DaemonStatus // Tracks daemon connection state for current command
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// Daemon mode
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daemonClient *rpc.Client // RPC client when daemon is running
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noDaemon bool // Force direct mode (no daemon)
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// Signal-aware context for graceful cancellation
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rootCtx context.Context
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rootCancel context.CancelFunc
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// Auto-flush state
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autoFlushEnabled = true // Can be disabled with --no-auto-flush
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flushMutex sync.Mutex
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storeMutex sync.Mutex // Protects store access from background goroutine
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storeActive = false // Tracks if store is available
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flushFailureCount = 0 // Consecutive flush failures
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lastFlushError error // Last flush error for debugging
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// Auto-flush manager (event-driven, fixes race condition)
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flushManager *FlushManager
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// Hook runner for extensibility
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hookRunner *hooks.Runner
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// skipFinalFlush is set by sync command when sync.branch mode completes successfully.
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// This prevents PersistentPostRun from re-exporting and dirtying the working directory.
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skipFinalFlush = false
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// Auto-import state
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autoImportEnabled = true // Can be disabled with --no-auto-import
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// Version upgrade tracking
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versionUpgradeDetected = false // Set to true if bd version changed since last run
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previousVersion = "" // The last bd version user had (empty = first run or unknown)
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upgradeAcknowledged = false // Set to true after showing upgrade notification once per session
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)
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var (
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noAutoFlush bool
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noAutoImport bool
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sandboxMode bool
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allowStale bool // Use --allow-stale: skip staleness check (emergency escape hatch)
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noDb bool // Use --no-db mode: load from JSONL, write back after each command
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readonlyMode bool // Read-only mode: block write operations (for worker sandboxes)
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storeIsReadOnly bool // Track if store was opened read-only (for staleness checks)
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lockTimeout time.Duration // SQLite busy_timeout (default 30s, 0 = fail immediately)
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profileEnabled bool
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profileFile *os.File
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traceFile *os.File
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verboseFlag bool // Enable verbose/debug output
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quietFlag bool // Suppress non-essential output
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// Dolt auto-commit policy (flag/config). Values: off | on
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doltAutoCommit string
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// commandDidWrite is set when a command performs a write that should trigger
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// auto-flush. Used to decide whether to auto-commit Dolt after the command completes.
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// Thread-safe via atomic.Bool to avoid data races in concurrent flush operations.
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commandDidWrite atomic.Bool
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// commandDidExplicitDoltCommit is set when a command already created a Dolt commit
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// explicitly (e.g., bd sync in dolt-native mode, hook flows, bd vc commit).
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// This prevents a redundant auto-commit attempt in PersistentPostRun.
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commandDidExplicitDoltCommit bool
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// commandDidWriteTipMetadata is set when a command records a tip as "shown" by writing
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// metadata (tip_*_last_shown). This will be used to create a separate Dolt commit for
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// tip writes, even when the main command is read-only.
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commandDidWriteTipMetadata bool
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// commandTipIDsShown tracks which tip IDs were shown in this command (deduped).
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// This is used for tip-commit message formatting.
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commandTipIDsShown map[string]struct{}
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)
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// readOnlyCommands lists commands that only read from the database.
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// These commands open SQLite in read-only mode to avoid modifying the
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// database file (which breaks file watchers). See GH#804.
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var readOnlyCommands = map[string]bool{
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"list": true,
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"ready": true,
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"show": true,
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"stats": true,
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"blocked": true,
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"count": true,
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"search": true,
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"graph": true,
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"duplicates": true,
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"comments": true, // list comments (not add)
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// NOTE: "export" is NOT read-only - it writes to clear dirty issues and update jsonl_file_hash
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}
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// isReadOnlyCommand returns true if the command only reads from the database.
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// This is used to open SQLite in read-only mode, preventing file modifications
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// that would trigger file watchers. See GH#804.
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func isReadOnlyCommand(cmdName string) bool {
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return readOnlyCommands[cmdName]
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}
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// getActorWithGit returns the actor for audit trails with git config fallback.
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// Priority: --actor flag > BD_ACTOR env > BEADS_ACTOR env > git config user.name > $USER > "unknown"
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// This provides a sensible default for developers: their git identity is used unless
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// explicitly overridden
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func getActorWithGit() string {
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// If actor is already set (from --actor flag), use it
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if actor != "" {
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return actor
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}
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// Check BD_ACTOR env var (primary env override)
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if bdActor := os.Getenv("BD_ACTOR"); bdActor != "" {
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return bdActor
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}
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// Check BEADS_ACTOR env var (alias for MCP/integration compatibility)
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if beadsActor := os.Getenv("BEADS_ACTOR"); beadsActor != "" {
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return beadsActor
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}
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// Try git config user.name - the natural default for a git-native tool
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if out, err := exec.Command("git", "config", "user.name").Output(); err == nil {
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if gitUser := strings.TrimSpace(string(out)); gitUser != "" {
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return gitUser
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}
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}
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// Fall back to system username
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if user := os.Getenv("USER"); user != "" {
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return user
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}
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return "unknown"
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}
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// getOwner returns the human owner for CV attribution.
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// Priority: GIT_AUTHOR_EMAIL env > git config user.email > "" (empty)
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// This is the foundation for HOP CV (curriculum vitae) chains per Decision 008.
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// Unlike actor (which tracks who executed), owner tracks the human responsible.
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func getOwner() string {
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// Check GIT_AUTHOR_EMAIL first - this is set during git commit operations
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if authorEmail := os.Getenv("GIT_AUTHOR_EMAIL"); authorEmail != "" {
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return authorEmail
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}
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// Fall back to git config user.email - the natural default
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if out, err := exec.Command("git", "config", "user.email").Output(); err == nil {
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if gitEmail := strings.TrimSpace(string(out)); gitEmail != "" {
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return gitEmail
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}
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}
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// Return empty if no email found (owner is optional)
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return ""
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}
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func init() {
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// Initialize viper configuration
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if err := config.Initialize(); err != nil {
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fmt.Fprintf(os.Stderr, "Warning: failed to initialize config: %v\n", err)
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}
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// Add command groups for organized help output
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rootCmd.AddGroup(
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&cobra.Group{ID: GroupMaintenance, Title: "Maintenance:"},
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&cobra.Group{ID: GroupIntegrations, Title: "Integrations & Advanced:"},
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)
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// Register persistent flags
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rootCmd.PersistentFlags().StringVar(&dbPath, "db", "", "Database path (default: auto-discover .beads/*.db)")
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rootCmd.PersistentFlags().StringVar(&actor, "actor", "", "Actor name for audit trail (default: $BD_ACTOR, git user.name, $USER)")
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rootCmd.PersistentFlags().BoolVar(&jsonOutput, "json", false, "Output in JSON format")
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rootCmd.PersistentFlags().BoolVar(&noDaemon, "no-daemon", false, "Force direct storage mode, bypass daemon if running")
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rootCmd.PersistentFlags().BoolVar(&noAutoFlush, "no-auto-flush", false, "Disable automatic JSONL sync after CRUD operations")
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rootCmd.PersistentFlags().BoolVar(&noAutoImport, "no-auto-import", false, "Disable automatic JSONL import when newer than DB")
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rootCmd.PersistentFlags().BoolVar(&sandboxMode, "sandbox", false, "Sandbox mode: disables daemon and auto-sync")
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rootCmd.PersistentFlags().BoolVar(&allowStale, "allow-stale", false, "Allow operations on potentially stale data (skip staleness check)")
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rootCmd.PersistentFlags().BoolVar(&noDb, "no-db", false, "Use no-db mode: load from JSONL, no SQLite")
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rootCmd.PersistentFlags().BoolVar(&readonlyMode, "readonly", false, "Read-only mode: block write operations (for worker sandboxes)")
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rootCmd.PersistentFlags().StringVar(&doltAutoCommit, "dolt-auto-commit", "", "Dolt backend: auto-commit after write commands (off|on). Default from config key dolt.auto-commit")
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rootCmd.PersistentFlags().DurationVar(&lockTimeout, "lock-timeout", 30*time.Second, "SQLite busy timeout (0 = fail immediately if locked)")
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rootCmd.PersistentFlags().BoolVar(&profileEnabled, "profile", false, "Generate CPU profile for performance analysis")
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rootCmd.PersistentFlags().BoolVarP(&verboseFlag, "verbose", "v", false, "Enable verbose/debug output")
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rootCmd.PersistentFlags().BoolVarP(&quietFlag, "quiet", "q", false, "Suppress non-essential output (errors only)")
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// Add --version flag to root command (same behavior as version subcommand)
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rootCmd.Flags().BoolP("version", "V", false, "Print version information")
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// Command groups for organized help output (Tufte-inspired)
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rootCmd.AddGroup(&cobra.Group{ID: "issues", Title: "Working With Issues:"})
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rootCmd.AddGroup(&cobra.Group{ID: "views", Title: "Views & Reports:"})
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rootCmd.AddGroup(&cobra.Group{ID: "deps", Title: "Dependencies & Structure:"})
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rootCmd.AddGroup(&cobra.Group{ID: "sync", Title: "Sync & Data:"})
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rootCmd.AddGroup(&cobra.Group{ID: "setup", Title: "Setup & Configuration:"})
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// NOTE: Many maintenance commands (clean, cleanup, compact, validate, repair-deps)
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// should eventually be consolidated into 'bd doctor' and 'bd doctor --fix' to simplify
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// the user experience. The doctor command can detect issues and offer fixes interactively.
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rootCmd.AddGroup(&cobra.Group{ID: "maint", Title: "Maintenance:"})
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rootCmd.AddGroup(&cobra.Group{ID: "advanced", Title: "Integrations & Advanced:"})
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// Custom help function with semantic coloring (Tufte-inspired)
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// Note: Usage output (shown on errors) is not styled to avoid recursion issues
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rootCmd.SetHelpFunc(colorizedHelpFunc)
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}
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var rootCmd = &cobra.Command{
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||
Use: "bd",
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Short: "bd - Dependency-aware issue tracker",
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Long: `Issues chained together like beads. A lightweight issue tracker with first-class dependency support.`,
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Run: func(cmd *cobra.Command, args []string) {
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// Handle --version flag on root command
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if v, _ := cmd.Flags().GetBool("version"); v {
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fmt.Printf("bd version %s (%s)\n", Version, Build)
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return
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}
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// No subcommand - show help
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_ = cmd.Help()
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},
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PersistentPreRun: func(cmd *cobra.Command, args []string) {
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// Initialize CommandContext to hold runtime state (replaces scattered globals)
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initCommandContext()
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// Reset per-command write tracking (used by Dolt auto-commit).
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commandDidWrite.Store(false)
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commandDidExplicitDoltCommit = false
|
||
commandDidWriteTipMetadata = false
|
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commandTipIDsShown = make(map[string]struct{})
|
||
|
||
// Set up signal-aware context for graceful cancellation
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rootCtx, rootCancel = signal.NotifyContext(context.Background(), os.Interrupt, syscall.SIGTERM)
|
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|
||
// Apply verbosity flags early (before any output)
|
||
debug.SetVerbose(verboseFlag)
|
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debug.SetQuiet(quietFlag)
|
||
|
||
// Apply viper configuration if flags weren't explicitly set
|
||
// Priority: flags > viper (config file + env vars) > defaults
|
||
// Do this BEFORE early-return so init/version/help respect config
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||
|
||
// Track flag overrides for notification (only in verbose mode)
|
||
flagOverrides := make(map[string]struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
})
|
||
|
||
// If flag wasn't explicitly set, use viper value
|
||
if !cmd.Flags().Changed("json") {
|
||
jsonOutput = config.GetBool("json")
|
||
} else {
|
||
flagOverrides["json"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{jsonOutput, true}
|
||
}
|
||
if !cmd.Flags().Changed("no-daemon") {
|
||
noDaemon = config.GetBool("no-daemon")
|
||
} else {
|
||
flagOverrides["no-daemon"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{noDaemon, true}
|
||
}
|
||
if !cmd.Flags().Changed("no-auto-flush") {
|
||
noAutoFlush = config.GetBool("no-auto-flush")
|
||
} else {
|
||
flagOverrides["no-auto-flush"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{noAutoFlush, true}
|
||
}
|
||
if !cmd.Flags().Changed("no-auto-import") {
|
||
noAutoImport = config.GetBool("no-auto-import")
|
||
} else {
|
||
flagOverrides["no-auto-import"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{noAutoImport, true}
|
||
}
|
||
if !cmd.Flags().Changed("no-db") {
|
||
noDb = config.GetBool("no-db")
|
||
} else {
|
||
flagOverrides["no-db"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{noDb, true}
|
||
}
|
||
if !cmd.Flags().Changed("readonly") {
|
||
readonlyMode = config.GetBool("readonly")
|
||
} else {
|
||
flagOverrides["readonly"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{readonlyMode, true}
|
||
}
|
||
if !cmd.Flags().Changed("lock-timeout") {
|
||
lockTimeout = config.GetDuration("lock-timeout")
|
||
} else {
|
||
flagOverrides["lock-timeout"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{lockTimeout, true}
|
||
}
|
||
if !cmd.Flags().Changed("db") && dbPath == "" {
|
||
dbPath = config.GetString("db")
|
||
} else if cmd.Flags().Changed("db") {
|
||
flagOverrides["db"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{dbPath, true}
|
||
}
|
||
if !cmd.Flags().Changed("actor") && actor == "" {
|
||
actor = config.GetString("actor")
|
||
} else if cmd.Flags().Changed("actor") {
|
||
flagOverrides["actor"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{actor, true}
|
||
}
|
||
if !cmd.Flags().Changed("dolt-auto-commit") && strings.TrimSpace(doltAutoCommit) == "" {
|
||
doltAutoCommit = config.GetString("dolt.auto-commit")
|
||
} else if cmd.Flags().Changed("dolt-auto-commit") {
|
||
flagOverrides["dolt-auto-commit"] = struct {
|
||
Value interface{}
|
||
WasSet bool
|
||
}{doltAutoCommit, true}
|
||
}
|
||
|
||
// Check for and log configuration overrides (only in verbose mode)
|
||
if verboseFlag {
|
||
overrides := config.CheckOverrides(flagOverrides)
|
||
for _, override := range overrides {
|
||
config.LogOverride(override)
|
||
}
|
||
}
|
||
|
||
// Validate Dolt auto-commit mode early so all commands fail fast on invalid config.
|
||
if _, err := getDoltAutoCommitMode(); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
|
||
// GH#1093: Check noDbCommands BEFORE expensive operations (ensureForkProtection,
|
||
// signalOrchestratorActivity) to avoid spawning git subprocesses for simple commands
|
||
// like "bd version" that don't need database access.
|
||
noDbCommands := []string{
|
||
cmdDaemon,
|
||
"__complete", // Cobra's internal completion command (shell completions work without db)
|
||
"__completeNoDesc", // Cobra's completion without descriptions (used by fish)
|
||
"bash",
|
||
"completion",
|
||
"doctor",
|
||
"fish",
|
||
"help",
|
||
"hooks",
|
||
"human",
|
||
"init",
|
||
"merge",
|
||
"onboard",
|
||
"powershell",
|
||
"prime",
|
||
"quickstart",
|
||
"repair",
|
||
"resolve-conflicts",
|
||
"setup",
|
||
"version",
|
||
"zsh",
|
||
}
|
||
// Check both the command name and parent command name for subcommands
|
||
cmdName := cmd.Name()
|
||
if cmd.Parent() != nil {
|
||
parentName := cmd.Parent().Name()
|
||
if slices.Contains(noDbCommands, parentName) {
|
||
return
|
||
}
|
||
}
|
||
if slices.Contains(noDbCommands, cmdName) {
|
||
return
|
||
}
|
||
|
||
// Skip for root command with no subcommand (just shows help)
|
||
if cmd.Parent() == nil && cmdName == "bd" {
|
||
return
|
||
}
|
||
|
||
// Also skip for --version flag on root command (cmdName would be "bd")
|
||
if v, _ := cmd.Flags().GetBool("version"); v {
|
||
return
|
||
}
|
||
|
||
// Signal orchestrator daemon about bd activity (best-effort, for exponential backoff)
|
||
// GH#1093: Moved after noDbCommands check to avoid git subprocesses for simple commands
|
||
defer signalOrchestratorActivity()
|
||
|
||
// Protect forks from accidentally committing upstream issue database
|
||
ensureForkProtection()
|
||
|
||
// Performance profiling setup
|
||
// When --profile is enabled, force direct mode to capture actual database operations
|
||
// rather than just RPC serialization/network overhead. This gives accurate profiles
|
||
// of the storage layer, query performance, and business logic.
|
||
if profileEnabled {
|
||
noDaemon = true
|
||
timestamp := time.Now().Format("20060102-150405")
|
||
if f, _ := os.Create(fmt.Sprintf("bd-profile-%s-%s.prof", cmd.Name(), timestamp)); f != nil {
|
||
profileFile = f
|
||
_ = pprof.StartCPUProfile(f)
|
||
}
|
||
if f, _ := os.Create(fmt.Sprintf("bd-trace-%s-%s.out", cmd.Name(), timestamp)); f != nil {
|
||
traceFile = f
|
||
_ = trace.Start(f)
|
||
}
|
||
}
|
||
|
||
// Auto-detect sandboxed environment (Phase 2 for GH #353)
|
||
// Only auto-enable if user hasn't explicitly set --sandbox or --no-daemon
|
||
if !cmd.Flags().Changed("sandbox") && !cmd.Flags().Changed("no-daemon") {
|
||
if isSandboxed() {
|
||
sandboxMode = true
|
||
fmt.Fprintf(os.Stderr, "ℹ️ Sandbox detected, using direct mode\n")
|
||
}
|
||
}
|
||
|
||
// If sandbox mode is set, enable all sandbox flags
|
||
if sandboxMode {
|
||
noDaemon = true
|
||
noAutoFlush = true
|
||
noAutoImport = true
|
||
// Use shorter lock timeout in sandbox mode unless explicitly set
|
||
if !cmd.Flags().Changed("lock-timeout") {
|
||
lockTimeout = 100 * time.Millisecond
|
||
}
|
||
}
|
||
|
||
// Force direct mode for human-only interactive commands
|
||
// edit: can take minutes in $EDITOR, daemon connection times out (GH #227)
|
||
if cmd.Name() == "edit" {
|
||
noDaemon = true
|
||
}
|
||
|
||
// Set auto-flush based on flag (invert no-auto-flush)
|
||
autoFlushEnabled = !noAutoFlush
|
||
|
||
// Set auto-import based on flag (invert no-auto-import)
|
||
autoImportEnabled = !noAutoImport
|
||
|
||
// Handle --no-db mode: load from JSONL, use in-memory storage
|
||
if noDb {
|
||
if err := initializeNoDbMode(); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error initializing --no-db mode: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
|
||
// Set actor for audit trail
|
||
actor = getActorWithGit()
|
||
|
||
// Skip daemon and SQLite initialization - we're in memory mode
|
||
return
|
||
}
|
||
|
||
// Initialize database path
|
||
if dbPath == "" {
|
||
// Use public API to find database (same logic as extensions)
|
||
if foundDB := beads.FindDatabasePath(); foundDB != "" {
|
||
dbPath = foundDB
|
||
} else {
|
||
// No database found - check if this is JSONL-only mode
|
||
beadsDir := beads.FindBeadsDir()
|
||
if beadsDir != "" {
|
||
jsonlPath := filepath.Join(beadsDir, "issues.jsonl")
|
||
|
||
// Check if JSONL exists and config.yaml has no-db: true
|
||
jsonlExists := false
|
||
if _, err := os.Stat(jsonlPath); err == nil {
|
||
jsonlExists = true
|
||
}
|
||
|
||
// Use proper YAML parsing to detect no-db mode
|
||
isNoDbMode := isNoDbModeConfigured(beadsDir)
|
||
|
||
// If JSONL-only mode is configured, auto-enable it
|
||
if jsonlExists && isNoDbMode {
|
||
noDb = true
|
||
if err := initializeNoDbMode(); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error initializing JSONL-only mode: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
// Set actor for audit trail
|
||
actor = getActorWithGit()
|
||
return
|
||
}
|
||
}
|
||
|
||
// Allow some commands to run without a database
|
||
// - import: auto-initializes database if missing
|
||
// - setup: creates editor integration files (no DB needed)
|
||
// - config set/get for yaml-only keys: writes to config.yaml, not SQLite (GH#536)
|
||
isYamlOnlyConfigOp := false
|
||
if (cmd.Name() == "set" || cmd.Name() == "get") && cmd.Parent() != nil && cmd.Parent().Name() == "config" {
|
||
if len(args) > 0 && config.IsYamlOnlyKey(args[0]) {
|
||
isYamlOnlyConfigOp = true
|
||
}
|
||
}
|
||
|
||
// Allow read-only commands to auto-bootstrap from JSONL (GH#b09)
|
||
// This enables `bd --no-daemon show` after cold-start when DB is missing
|
||
canAutoBootstrap := false
|
||
if isReadOnlyCommand(cmd.Name()) && beadsDir != "" {
|
||
jsonlPath := filepath.Join(beadsDir, "issues.jsonl")
|
||
if _, err := os.Stat(jsonlPath); err == nil {
|
||
canAutoBootstrap = true
|
||
debug.Logf("cold-start bootstrap: JSONL exists, allowing auto-create for %s", cmd.Name())
|
||
}
|
||
}
|
||
|
||
if cmd.Name() != "import" && cmd.Name() != "setup" && !isYamlOnlyConfigOp && !canAutoBootstrap {
|
||
// No database found - provide context-aware error message
|
||
fmt.Fprintf(os.Stderr, "Error: no beads database found\n")
|
||
|
||
// Check if JSONL exists without no-db mode configured
|
||
if beadsDir != "" {
|
||
jsonlPath := filepath.Join(beadsDir, "issues.jsonl")
|
||
if _, err := os.Stat(jsonlPath); err == nil {
|
||
// JSONL exists but no-db mode not configured
|
||
fmt.Fprintf(os.Stderr, "\nFound JSONL file: %s\n", jsonlPath)
|
||
fmt.Fprintf(os.Stderr, "This looks like a fresh clone or JSONL-only project.\n\n")
|
||
fmt.Fprintf(os.Stderr, "Options:\n")
|
||
fmt.Fprintf(os.Stderr, " • Run 'bd init' to create database and import issues\n")
|
||
fmt.Fprintf(os.Stderr, " • Use 'bd --no-db %s' for JSONL-only mode\n", cmd.Name())
|
||
fmt.Fprintf(os.Stderr, " • Add 'no-db: true' to .beads/config.yaml for permanent JSONL-only mode\n")
|
||
os.Exit(1)
|
||
}
|
||
}
|
||
|
||
// Generic error - no beads directory or JSONL found
|
||
fmt.Fprintf(os.Stderr, "Hint: run 'bd init' to create a database in the current directory\n")
|
||
fmt.Fprintf(os.Stderr, " or use 'bd --no-db' to work with JSONL only (no SQLite)\n")
|
||
fmt.Fprintf(os.Stderr, " or set BEADS_DIR to point to your .beads directory\n")
|
||
os.Exit(1)
|
||
}
|
||
// For import/setup commands, set default database path
|
||
// Invariant: dbPath must always be absolute for filepath.Rel() compatibility
|
||
// in daemon sync-branch code path. Use CanonicalizePath for OS-agnostic
|
||
// handling (symlinks, case normalization on macOS).
|
||
//
|
||
// IMPORTANT: Use FindBeadsDir() to get the correct .beads directory,
|
||
// which follows redirect files. Without this, a redirected .beads
|
||
// would create a local database instead of using the redirect target.
|
||
// (GH#bd-0qel)
|
||
targetBeadsDir := beads.FindBeadsDir()
|
||
if targetBeadsDir == "" {
|
||
targetBeadsDir = ".beads"
|
||
}
|
||
dbPath = utils.CanonicalizePath(filepath.Join(targetBeadsDir, beads.CanonicalDatabaseName))
|
||
}
|
||
}
|
||
|
||
// Set actor for audit trail
|
||
actor = getActorWithGit()
|
||
|
||
// Track bd version changes
|
||
// Best-effort tracking - failures are silent
|
||
trackBdVersion()
|
||
|
||
// Initialize daemon status
|
||
socketPath := getSocketPath()
|
||
daemonStatus = DaemonStatus{
|
||
Mode: "direct",
|
||
Connected: false,
|
||
Degraded: true,
|
||
SocketPath: socketPath,
|
||
AutoStartEnabled: shouldAutoStartDaemon(),
|
||
FallbackReason: FallbackNone,
|
||
}
|
||
|
||
// Doctor should always run in direct mode. It's specifically used to diagnose and
|
||
// repair daemon/DB issues, so attempting to connect to (or auto-start) a daemon
|
||
// can add noise and timeouts.
|
||
if cmd.Name() == "doctor" {
|
||
noDaemon = true
|
||
}
|
||
|
||
// Wisp operations auto-bypass daemon
|
||
// Wisps are ephemeral (Ephemeral=true) and never exported to JSONL,
|
||
// so daemon can't help anyway. This reduces friction in wisp workflows.
|
||
if isWispOperation(cmd, args) {
|
||
noDaemon = true
|
||
daemonStatus.FallbackReason = FallbackWispOperation
|
||
debug.Logf("wisp operation detected, using direct mode")
|
||
}
|
||
|
||
// Embedded Dolt is single-process-only; never use daemon/RPC.
|
||
// (Dolt server mode supports multi-process and won't trigger this.)
|
||
// This must be checked after dbPath is resolved.
|
||
if !noDaemon && singleProcessOnlyBackend() {
|
||
noDaemon = true
|
||
daemonStatus.AutoStartEnabled = false
|
||
daemonStatus.FallbackReason = FallbackSingleProcessOnly
|
||
daemonStatus.Detail = "backend is single-process-only (embedded dolt): daemon mode disabled; using direct mode"
|
||
debug.Logf("single-process backend detected, using direct mode")
|
||
}
|
||
|
||
// Try to connect to daemon first (unless --no-daemon flag is set or worktree safety check fails)
|
||
if noDaemon {
|
||
// Only set FallbackFlagNoDaemon if not already set by auto-bypass logic
|
||
if daemonStatus.FallbackReason == FallbackNone {
|
||
daemonStatus.FallbackReason = FallbackFlagNoDaemon
|
||
debug.Logf("--no-daemon flag set, using direct mode")
|
||
}
|
||
} else if shouldDisableDaemonForWorktree() {
|
||
// In a git worktree without sync-branch configured - daemon is unsafe
|
||
// because all worktrees share the same .beads directory and the daemon
|
||
// would commit to whatever branch its working directory has checked out.
|
||
daemonStatus.FallbackReason = FallbackWorktreeSafety
|
||
debug.Logf("git worktree detected without sync-branch, using direct mode for safety")
|
||
} else {
|
||
// Attempt daemon connection
|
||
client, err := rpc.TryConnect(socketPath)
|
||
if err == nil && client != nil {
|
||
// Set expected database path for validation
|
||
if dbPath != "" {
|
||
absDBPath, _ := filepath.Abs(dbPath)
|
||
client.SetDatabasePath(absDBPath)
|
||
}
|
||
|
||
// Perform health check
|
||
health, healthErr := client.Health()
|
||
if healthErr == nil && health.Status == statusHealthy {
|
||
// Check version compatibility
|
||
if !health.Compatible {
|
||
debug.Logf("daemon version mismatch (daemon: %s, client: %s), restarting daemon",
|
||
health.Version, Version)
|
||
_ = client.Close()
|
||
|
||
// Kill old daemon and restart with new version
|
||
if restartDaemonForVersionMismatch() {
|
||
// Retry connection after restart
|
||
client, err = rpc.TryConnect(socketPath)
|
||
if err == nil && client != nil {
|
||
if dbPath != "" {
|
||
absDBPath, _ := filepath.Abs(dbPath)
|
||
client.SetDatabasePath(absDBPath)
|
||
}
|
||
health, healthErr = client.Health()
|
||
if healthErr == nil && health.Status == statusHealthy {
|
||
client.SetActor(actor)
|
||
daemonClient = client
|
||
daemonStatus.Mode = cmdDaemon
|
||
daemonStatus.Connected = true
|
||
daemonStatus.Degraded = false
|
||
daemonStatus.Health = health.Status
|
||
debug.Logf("connected to restarted daemon (version: %s)", health.Version)
|
||
warnWorktreeDaemon(dbPath)
|
||
return
|
||
}
|
||
}
|
||
}
|
||
// If restart failed, fall through to direct mode
|
||
daemonStatus.FallbackReason = FallbackHealthFailed
|
||
daemonStatus.Detail = fmt.Sprintf("version mismatch (daemon: %s, client: %s) and restart failed",
|
||
health.Version, Version)
|
||
} else {
|
||
// Daemon is healthy and compatible - use it
|
||
client.SetActor(actor)
|
||
daemonClient = client
|
||
daemonStatus.Mode = cmdDaemon
|
||
daemonStatus.Connected = true
|
||
daemonStatus.Degraded = false
|
||
daemonStatus.Health = health.Status
|
||
debug.Logf("connected to daemon at %s (health: %s)", socketPath, health.Status)
|
||
// Warn if using daemon with git worktrees
|
||
warnWorktreeDaemon(dbPath)
|
||
return // Skip direct storage initialization
|
||
}
|
||
} else {
|
||
// Health check failed or daemon unhealthy
|
||
_ = client.Close()
|
||
daemonStatus.FallbackReason = FallbackHealthFailed
|
||
if healthErr != nil {
|
||
daemonStatus.Detail = healthErr.Error()
|
||
debug.Logf("daemon health check failed: %v", healthErr)
|
||
} else {
|
||
daemonStatus.Health = health.Status
|
||
daemonStatus.Detail = health.Error
|
||
debug.Logf("daemon unhealthy (status=%s): %s", health.Status, health.Error)
|
||
}
|
||
}
|
||
} else {
|
||
// Connection failed
|
||
daemonStatus.FallbackReason = FallbackConnectFailed
|
||
if err != nil {
|
||
daemonStatus.Detail = err.Error()
|
||
debug.Logf("daemon connect failed at %s: %v", socketPath, err)
|
||
}
|
||
}
|
||
|
||
// Daemon not running or unhealthy - try auto-start if enabled
|
||
if daemonStatus.AutoStartEnabled {
|
||
daemonStatus.AutoStartAttempted = true
|
||
debug.Logf("attempting to auto-start daemon")
|
||
startTime := time.Now()
|
||
if tryAutoStartDaemon(socketPath) {
|
||
// Retry connection after auto-start
|
||
client, err := rpc.TryConnect(socketPath)
|
||
if err == nil && client != nil {
|
||
// Set expected database path for validation
|
||
if dbPath != "" {
|
||
absDBPath, _ := filepath.Abs(dbPath)
|
||
client.SetDatabasePath(absDBPath)
|
||
}
|
||
|
||
// Check health of auto-started daemon
|
||
health, healthErr := client.Health()
|
||
if healthErr == nil && health.Status == statusHealthy {
|
||
client.SetActor(actor)
|
||
daemonClient = client
|
||
daemonStatus.Mode = cmdDaemon
|
||
daemonStatus.Connected = true
|
||
daemonStatus.Degraded = false
|
||
daemonStatus.AutoStartSucceeded = true
|
||
daemonStatus.Health = health.Status
|
||
daemonStatus.FallbackReason = FallbackNone
|
||
elapsed := time.Since(startTime).Milliseconds()
|
||
debug.Logf("auto-start succeeded; connected at %s in %dms", socketPath, elapsed)
|
||
// Warn if using daemon with git worktrees
|
||
warnWorktreeDaemon(dbPath)
|
||
return // Skip direct storage initialization
|
||
} else {
|
||
// Auto-started daemon is unhealthy
|
||
_ = client.Close()
|
||
daemonStatus.FallbackReason = FallbackHealthFailed
|
||
if healthErr != nil {
|
||
daemonStatus.Detail = healthErr.Error()
|
||
} else {
|
||
daemonStatus.Health = health.Status
|
||
daemonStatus.Detail = health.Error
|
||
}
|
||
debug.Logf("auto-started daemon is unhealthy; falling back to direct mode")
|
||
}
|
||
} else {
|
||
// Auto-start completed but connection still failed
|
||
daemonStatus.FallbackReason = FallbackAutoStartFailed
|
||
if err != nil {
|
||
daemonStatus.Detail = err.Error()
|
||
}
|
||
// Check for daemon-error file to provide better error message
|
||
if beadsDir := filepath.Dir(socketPath); beadsDir != "" {
|
||
errFile := filepath.Join(beadsDir, "daemon-error")
|
||
// nolint:gosec // G304: errFile is derived from secure beads directory
|
||
if errMsg, readErr := os.ReadFile(errFile); readErr == nil && len(errMsg) > 0 {
|
||
fmt.Fprintf(os.Stderr, "\n%s\n", string(errMsg))
|
||
daemonStatus.Detail = string(errMsg)
|
||
}
|
||
}
|
||
debug.Logf("auto-start did not yield a running daemon; falling back to direct mode")
|
||
}
|
||
} else {
|
||
// Auto-start itself failed
|
||
daemonStatus.FallbackReason = FallbackAutoStartFailed
|
||
debug.Logf("auto-start failed; falling back to direct mode")
|
||
}
|
||
} else {
|
||
// Auto-start disabled - preserve the actual failure reason
|
||
// Don't override connect_failed or health_failed with auto_start_disabled
|
||
// This preserves important diagnostic info (daemon crashed vs not running)
|
||
debug.Logf("auto-start disabled by BEADS_AUTO_START_DAEMON")
|
||
}
|
||
|
||
// Emit BD_VERBOSE warning if falling back to direct mode
|
||
if os.Getenv("BD_VERBOSE") != "" {
|
||
emitVerboseWarning()
|
||
}
|
||
|
||
debug.Logf("using direct mode (reason: %s)", daemonStatus.FallbackReason)
|
||
}
|
||
|
||
// Check if this is a read-only command (GH#804)
|
||
// Read-only commands open SQLite in read-only mode to avoid modifying
|
||
// the database file (which breaks file watchers).
|
||
useReadOnly := isReadOnlyCommand(cmd.Name())
|
||
|
||
// Auto-migrate database on version bump
|
||
// Skip for read-only commands - they can't write anyway
|
||
// Do this AFTER daemon check but BEFORE opening database for main operation
|
||
// This ensures: 1) no daemon has DB open, 2) we don't open DB twice
|
||
if !useReadOnly {
|
||
autoMigrateOnVersionBump(dbPath)
|
||
}
|
||
|
||
// Fall back to direct storage access
|
||
var err error
|
||
var needsBootstrap bool // Track if DB needs initial import (GH#b09)
|
||
beadsDir := filepath.Dir(dbPath)
|
||
|
||
// Detect backend from metadata.json
|
||
backend := factory.GetBackendFromConfig(beadsDir)
|
||
|
||
// Create storage with appropriate options
|
||
opts := factory.Options{
|
||
ReadOnly: useReadOnly,
|
||
LockTimeout: lockTimeout,
|
||
}
|
||
|
||
if backend == configfile.BackendDolt {
|
||
// For Dolt, use the dolt subdirectory
|
||
doltPath := filepath.Join(beadsDir, "dolt")
|
||
|
||
// Check if server mode is configured in metadata.json
|
||
cfg, cfgErr := configfile.Load(beadsDir)
|
||
if cfgErr == nil && cfg != nil && cfg.IsDoltServerMode() {
|
||
opts.ServerMode = true
|
||
opts.ServerHost = cfg.GetDoltServerHost()
|
||
opts.ServerPort = cfg.GetDoltServerPort()
|
||
if cfg.Database != "" {
|
||
opts.Database = cfg.Database
|
||
}
|
||
}
|
||
|
||
store, err = factory.NewWithOptions(rootCtx, backend, doltPath, opts)
|
||
} else {
|
||
// SQLite backend
|
||
store, err = factory.NewWithOptions(rootCtx, backend, dbPath, opts)
|
||
if err != nil && useReadOnly {
|
||
// If read-only fails (e.g., DB doesn't exist), fall back to read-write
|
||
// This handles the case where user runs "bd list" before "bd init"
|
||
debug.Logf("read-only open failed, falling back to read-write: %v", err)
|
||
opts.ReadOnly = false
|
||
store, err = factory.NewWithOptions(rootCtx, backend, dbPath, opts)
|
||
needsBootstrap = true // New DB needs auto-import (GH#b09)
|
||
}
|
||
}
|
||
|
||
// Track final read-only state for staleness checks (GH#1089)
|
||
// opts.ReadOnly may have changed if read-only open failed and fell back
|
||
storeIsReadOnly = opts.ReadOnly
|
||
|
||
if err != nil {
|
||
// Check for fresh clone scenario
|
||
if handleFreshCloneError(err, beadsDir) {
|
||
os.Exit(1)
|
||
}
|
||
fmt.Fprintf(os.Stderr, "Error: failed to open database: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
|
||
// Mark store as active for flush goroutine safety
|
||
storeMutex.Lock()
|
||
storeActive = true
|
||
storeMutex.Unlock()
|
||
|
||
// Initialize flush manager (fixes race condition in auto-flush)
|
||
// Skip FlushManager creation in sandbox mode - no background goroutines needed
|
||
// (improves Windows exit behavior and container scenarios)
|
||
// Skip for read-only commands - they don't write anything (GH#804)
|
||
// For in-process test scenarios where commands run multiple times,
|
||
// we create a new manager each time. Shutdown() is idempotent so
|
||
// PostRun can safely shutdown whichever manager is active.
|
||
if !sandboxMode && !useReadOnly {
|
||
flushManager = NewFlushManager(autoFlushEnabled, getDebounceDuration())
|
||
}
|
||
|
||
// Initialize hook runner
|
||
// dbPath is .beads/something.db, so workspace root is parent of .beads
|
||
if dbPath != "" {
|
||
beadsDir := filepath.Dir(dbPath)
|
||
hookRunner = hooks.NewRunner(filepath.Join(beadsDir, "hooks"))
|
||
}
|
||
|
||
// Warn if multiple databases detected in directory hierarchy
|
||
warnMultipleDatabases(dbPath)
|
||
|
||
// Auto-import if JSONL is newer than DB (e.g., after git pull)
|
||
// Skip for import command itself to avoid recursion
|
||
// Skip for delete command to prevent resurrection of deleted issues
|
||
// Skip if sync --dry-run to avoid modifying DB in dry-run mode
|
||
// Skip for read-only commands - they can't write anyway (GH#804)
|
||
// Exception: allow auto-import for read-only commands that fell back to
|
||
// read-write mode due to missing DB (needsBootstrap) - fixes GH#b09
|
||
if cmd.Name() != "import" && cmd.Name() != "delete" && autoImportEnabled && (!useReadOnly || needsBootstrap) {
|
||
// Check if this is sync command with --dry-run flag
|
||
if cmd.Name() == "sync" {
|
||
if dryRun, _ := cmd.Flags().GetBool("dry-run"); dryRun {
|
||
// Skip auto-import in dry-run mode
|
||
debug.Logf("auto-import skipped for sync --dry-run")
|
||
} else {
|
||
autoImportIfNewer()
|
||
}
|
||
} else {
|
||
autoImportIfNewer()
|
||
}
|
||
}
|
||
|
||
// Load molecule templates from hierarchical catalog locations
|
||
// Templates are loaded after auto-import to ensure the database is up-to-date.
|
||
// Skip for import command to avoid conflicts during import operations.
|
||
if cmd.Name() != "import" && store != nil {
|
||
beadsDir := filepath.Dir(dbPath)
|
||
loader := molecules.NewLoader(store)
|
||
if result, err := loader.LoadAll(rootCtx, beadsDir); err != nil {
|
||
debug.Logf("warning: failed to load molecules: %v", err)
|
||
} else if result.Loaded > 0 {
|
||
debug.Logf("loaded %d molecules from %v", result.Loaded, result.Sources)
|
||
}
|
||
}
|
||
|
||
// Tips (including sync conflict proactive checks) are shown via maybeShowTip()
|
||
// after successful command execution, not in PreRun
|
||
|
||
// Sync all state to CommandContext for unified access
|
||
syncCommandContext()
|
||
},
|
||
PersistentPostRun: func(cmd *cobra.Command, args []string) {
|
||
// Handle --no-db mode: write memory storage back to JSONL
|
||
if noDb {
|
||
if store != nil {
|
||
// Determine beads directory (respect BEADS_DIR)
|
||
var beadsDir string
|
||
if envDir := os.Getenv("BEADS_DIR"); envDir != "" {
|
||
// Canonicalize the path
|
||
beadsDir = utils.CanonicalizePath(envDir)
|
||
} else {
|
||
// Fall back to current directory
|
||
cwd, err := os.Getwd()
|
||
if err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error: failed to get current directory: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
beadsDir = filepath.Join(cwd, ".beads")
|
||
}
|
||
|
||
if memStore, ok := store.(*memory.MemoryStorage); ok {
|
||
if err := writeIssuesToJSONL(memStore, beadsDir); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error: failed to write JSONL: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
}
|
||
}
|
||
return
|
||
}
|
||
|
||
// Close daemon client if we're using it
|
||
if daemonClient != nil {
|
||
_ = daemonClient.Close()
|
||
return
|
||
}
|
||
|
||
// Otherwise, handle direct mode cleanup
|
||
// Shutdown flush manager (performs final flush if needed)
|
||
// Skip if sync command already handled export and restore (sync.branch mode)
|
||
if flushManager != nil && !skipFinalFlush {
|
||
if err := flushManager.Shutdown(); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Warning: flush manager shutdown error: %v\n", err)
|
||
}
|
||
}
|
||
|
||
// Dolt auto-commit: after a successful write command (and after final flush),
|
||
// create a Dolt commit so changes don't remain only in the working set.
|
||
if commandDidWrite.Load() && !commandDidExplicitDoltCommit {
|
||
if err := maybeAutoCommit(rootCtx, doltAutoCommitParams{Command: cmd.Name()}); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error: dolt auto-commit failed: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
}
|
||
|
||
// Tip metadata auto-commit: if a tip was shown, create a separate Dolt commit for the
|
||
// tip_*_last_shown metadata updates. This may happen even for otherwise read-only commands.
|
||
if commandDidWriteTipMetadata && len(commandTipIDsShown) > 0 {
|
||
// Only applies when dolt auto-commit is enabled and backend is versioned (Dolt).
|
||
if mode, err := getDoltAutoCommitMode(); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error: dolt tip auto-commit failed: %v\n", err)
|
||
os.Exit(1)
|
||
} else if mode == doltAutoCommitOn {
|
||
// Apply tip metadata writes now (deferred in recordTipShown for Dolt).
|
||
for tipID := range commandTipIDsShown {
|
||
key := fmt.Sprintf("tip_%s_last_shown", tipID)
|
||
value := time.Now().Format(time.RFC3339)
|
||
if err := store.SetMetadata(rootCtx, key, value); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error: dolt tip auto-commit failed: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
}
|
||
|
||
ids := make([]string, 0, len(commandTipIDsShown))
|
||
for tipID := range commandTipIDsShown {
|
||
ids = append(ids, tipID)
|
||
}
|
||
msg := formatDoltAutoCommitMessage("tip", getActor(), ids)
|
||
if err := maybeAutoCommit(rootCtx, doltAutoCommitParams{Command: "tip", MessageOverride: msg}); err != nil {
|
||
fmt.Fprintf(os.Stderr, "Error: dolt tip auto-commit failed: %v\n", err)
|
||
os.Exit(1)
|
||
}
|
||
}
|
||
}
|
||
|
||
// Signal that store is closing (prevents background flush from accessing closed store)
|
||
storeMutex.Lock()
|
||
storeActive = false
|
||
storeMutex.Unlock()
|
||
|
||
if store != nil {
|
||
_ = store.Close()
|
||
}
|
||
if profileFile != nil {
|
||
pprof.StopCPUProfile()
|
||
_ = profileFile.Close()
|
||
}
|
||
if traceFile != nil {
|
||
trace.Stop()
|
||
_ = traceFile.Close()
|
||
}
|
||
|
||
// Cancel the signal context to clean up resources
|
||
if rootCancel != nil {
|
||
rootCancel()
|
||
}
|
||
},
|
||
}
|
||
|
||
func main() {
|
||
if err := rootCmd.Execute(); err != nil {
|
||
os.Exit(1)
|
||
}
|
||
}
|