When bd sync fails mid-operation, the local JSONL can become stale while
the SQLite database has the correct state. Previously, bd doctor only
checked count and timestamp differences, missing cases where counts match
but issue statuses differ.
This adds content-level comparison to CheckDatabaseJSONLSync that:
- Compares issue statuses between DB and JSONL
- Samples up to 500 issues for performance on large databases
- Reports detailed mismatches (shows up to 3 examples)
- Suggests 'bd export' to fix the stale JSONL
Example detection:
Status mismatch: 1 issue(s) have different status in DB vs JSONL
Status mismatches detected:
test-1: DB=closed, JSONL=open
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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