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beads/cmd/bd
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Steve Yegge 3a4840169d fix(init): add safety guard to prevent overwriting existing data 
bd init now refuses when:
- JSONL file exists with >0 issues (fresh clone scenario)
- Database file already exists (already initialized)

Suggests `bd doctor --fix` for fresh clones and provides clear guidance.
Added --force flag to bypass the safety guard when needed.

Closes: bd-emg

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-28 22:15:13 -08:00
..
doctor
test(doctor): add test for beads.base.jsonl merge artifacts (bd-ov1)
2025-11-28 21:52:48 -08:00
setup
fix: skip file permission tests on Windows
2025-11-24 22:23:45 -08:00
templates
chore: Bump version to 0.26.0
2025-11-27 01:06:45 -08:00
testdata
…
autoflush.go
Fix auto-import git history backfill bug (bd-4pv)
2025-11-27 22:51:39 -08:00
autoimport_test.go
fix: Add defense-in-depth check for --no-auto-import flag (bd-4t7)
2025-11-27 00:54:29 -08:00
autoimport.go
Fix auto-import git history backfill bug (bd-4pv)
2025-11-27 22:51:39 -08:00
autostart_test.go
…
clean_security_test.go
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clean.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
cleanup.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
cli_fast_test.go
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comments_test.go
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comments.go
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compact_test.go
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compact.go
feat(deletions): complete deletions manifest epic with integration tests
2025-11-25 16:36:46 -08:00
config_test.go
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config.go
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count.go
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create_test.go
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create.go
Add tip system infrastructure (bd-d4i)
2025-11-24 10:56:14 -08:00
daemon_autoimport_test.go
…
daemon_autostart.go
refactor: remove deprecated global daemon support
2025-11-24 23:39:54 -08:00
daemon_config.go
refactor: remove deprecated global daemon support
2025-11-24 23:39:54 -08:00
daemon_crash_test.go
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daemon_debouncer_test.go
fix: CI test failures on Windows
2025-11-26 20:59:07 -08:00
daemon_debouncer.go
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daemon_event_loop.go
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daemon_lifecycle.go
refactor: remove deprecated global daemon support
2025-11-24 23:39:54 -08:00
daemon_lock_test.go
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daemon_lock_unix.go
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daemon_lock_wasm.go
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daemon_lock_windows.go
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daemon_lock.go
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daemon_logger.go
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daemon_parent_test.go
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daemon_rotation_test.go
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daemon_server.go
refactor: remove deprecated global daemon support
2025-11-24 23:39:54 -08:00
daemon_sync_branch_test.go
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daemon_sync_branch.go
…
daemon_sync_test.go
Fix bd-v0y: Remove mtime fast-path in hasJSONLChanged
2025-11-23 22:53:54 -08:00
daemon_sync.go
Fix validatePostImport false positive for legitimate deletions (bd-pg1)
2025-11-28 17:43:25 -08:00
daemon_test.go
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daemon_unix_test.go
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daemon_unix.go
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daemon_wasm.go
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daemon_watcher_platform_test.go
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daemon_watcher_test.go
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daemon_watcher.go
…
daemon_windows.go
…
daemon.go
refactor: remove deprecated global daemon support
2025-11-24 23:39:54 -08:00
daemons_test.go
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daemons.go
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delete_recording_test.go
bd sync: 2025-11-25 11:46:06
2025-11-25 11:46:06 -08:00
delete_test.go
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delete.go
bd sync: 2025-11-25 11:46:06
2025-11-25 11:46:06 -08:00
deleted.go
feat(deletions): complete deletions manifest epic with integration tests
2025-11-25 16:36:46 -08:00
deletion_propagation_test.go
bd sync: 2025-11-25 12:03:21
2025-11-25 12:03:21 -08:00
deletion_tracking_test.go
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deletion_tracking.go
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dep_test.go
bd sync: 2025-11-25 19:32:04
2025-11-25 19:32:05 -08:00
dep.go
bd sync: 2025-11-25 19:32:04
2025-11-25 19:32:05 -08:00
detect_pollution.go
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direct_mode_test.go
…
direct_mode.go
Fix fresh clone UX with friendly error messages (bd-dmb)
2025-11-27 22:40:57 -08:00
doctor_test.go
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doctor.go
bd-4ew: Doctor detects fresh clone and recommends 'bd init'
2025-11-28 21:59:59 -08:00
duplicates_test.go
Implement auto-merge functionality for duplicates command
2025-11-27 22:39:13 -08:00
duplicates.go
Implement auto-merge functionality for duplicates command
2025-11-27 22:39:13 -08:00
epic_test.go
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epic.go
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export_import_test.go
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export_integrity_integration_test.go
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export_mtime_test.go
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export_staleness_test.go
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export_test.go
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export.go
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flags.go
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flush_manager_test.go
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flush_manager.go
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git_sync_test.go
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helpers_test.go
fix: support multi-part prefixes in issue ID extraction (#398)
2025-11-26 17:42:14 -08:00
hooks_test.go
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hooks.go
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import_bug_test.go
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import_cancellation_test.go
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import_idempotent_test.go
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import_mtime_test.go
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import_multipart_id_test.go
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import_profile_test.go
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import_shared.go
feat(import,sync): add --no-git-history flag to prevent spurious deletions
2025-11-26 23:10:43 -08:00
import_uncommitted_test.go
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import.go
Fix fresh clone UX with friendly error messages (bd-dmb)
2025-11-27 22:40:57 -08:00
info_test.go
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info.go
chore: Bump version to 0.26.0
2025-11-27 01:06:45 -08:00
init_contributor.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
init_hooks_test.go
…
init_team.go
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init_test.go
fix(init): add safety guard to prevent overwriting existing data
2025-11-28 22:15:13 -08:00
init.go
fix(init): add safety guard to prevent overwriting existing data
2025-11-28 22:15:13 -08:00
integrity_content_test.go
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integrity_test.go
Export and display close reasons for issues (beads-410)
2025-11-28 18:39:07 -08:00
integrity.go
Export and display close reasons for issues (beads-410)
2025-11-28 18:39:07 -08:00
jsonl_integrity_test.go
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label_test.go
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label.go
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list_test.go
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list.go
Add --sort and --reverse flags to bd list command
2025-11-24 20:16:07 -08:00
main_test.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
main.go
Fix fresh clone UX with friendly error messages (bd-dmb)
2025-11-27 22:40:57 -08:00
markdown_test.go
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markdown.go
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merge_security_test.go
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merge.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
message.go
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migrate_hash_ids_test.go
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migrate_hash_ids.go
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migrate_issues.go
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migrate_test.go
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migrate.go
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nodb_test.go
fix: support multi-part prefixes in issue ID extraction (#398)
2025-11-26 17:42:14 -08:00
nodb.go
fix: support multi-part prefixes in issue ID extraction (#398)
2025-11-26 17:42:14 -08:00
onboard_test.go
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onboard.go
fix: doctor deletions check and onboard docs improvements
2025-11-27 13:23:14 -08:00
output_test.go
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prime.go
bd prime: Auto-detect ephemeral branches and adjust workflow
2025-11-25 17:12:42 -08:00
quickstart.go
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ready_test.go
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ready.go
Add tip system infrastructure (bd-d4i)
2025-11-24 10:56:14 -08:00
reinit_test.go
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rename_prefix_repair_test.go
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rename_prefix_test.go
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rename_prefix.go
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reopen_test.go
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reopen.go
Support --reason flag in daemon mode for reopen command (bd-r46)
2025-11-24 01:12:33 -08:00
repair_deps_test.go
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repair_deps.go
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repo.go
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restore_test.go
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restore.go
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sandbox_test.go
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sandbox_unix.go
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sandbox_windows.go
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scripttest_test.go
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search_test.go
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search.go
bd sync: 2025-11-24 21:16:44
2025-11-24 21:16:44 -08:00
setup.go
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show.go
Add close reason display for closed issues
2025-11-28 17:36:01 -08:00
simple_helpers_test.go
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snapshot_manager.go
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stale_test.go
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stale.go
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staleness.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
status_test.go
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status.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
sync_local_only_test.go
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sync_merge_test.go
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sync_test.go
fix(tests): resolve short test performance regression (bd-0v4)
2025-11-27 01:36:57 -08:00
sync.go
fix(sync): cleanup snapshots after sync regardless of --no-pull (bd-0io)
2025-11-28 21:51:08 -08:00
template_security_test.go
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template_test.go
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template.go
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test_helpers_test.go
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test_wait_helper.go
fix: CI test failures and lint errors
2025-11-24 00:21:01 -08:00
tips_example_test.go
Add tip system infrastructure (bd-d4i)
2025-11-24 10:56:14 -08:00
tips_test.go
bd sync: 2025-11-24 11:28:32
2025-11-24 11:28:32 -08:00
tips.go
fix: resolve golangci-lint errors
2025-11-24 22:21:55 -08:00
upgrade.go
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validate_test.go
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validate.go
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version_test.go
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version_tracking_test.go
fix(tests): resolve short test performance regression (bd-0v4)
2025-11-27 01:36:57 -08:00
version_tracking.go
bd-6xd: Standardize on issues.jsonl as canonical filename
2025-11-26 22:02:59 -08:00
version.go
chore: Bump version to 0.26.0
2025-11-27 01:06:45 -08:00
worktree_test.go
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worktree.go
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