Fix critical TOCTOU bug where concurrent operations could lose dirty issue tracking, causing data loss in incremental exports. Also fixes bug where export with filters would incorrectly clear all dirty issues. The Problem: 1. GetDirtyIssues() returns [bd-1, bd-2] 2. Concurrent CRUD marks bd-3 dirty 3. Export writes bd-1, bd-2 4. ClearDirtyIssues() deletes ALL (including bd-3) 5. Result: bd-3 never gets exported! The Fix: - Add ClearDirtyIssuesByID() that only clears specific issue IDs - Track which issues were actually exported - Clear only those specific IDs, not all dirty issues - Fixes both race condition and filter export bug Changes: - internal/storage/sqlite/dirty.go: * Add ClearDirtyIssuesByID() method * Add warning to ClearDirtyIssues() about race condition - internal/storage/storage.go: * Add ClearDirtyIssuesByID to interface - cmd/bd/main.go: * Update auto-flush to use ClearDirtyIssuesByID() - cmd/bd/export.go: * Track exported issue IDs * Use ClearDirtyIssuesByID() instead of ClearDirtyIssues() Testing: - Created test-1, test-2, test-3 (all dirty) - Updated test-2 to in_progress - Exported with --status open filter (exports only test-1, test-3) - Verified only test-2 remains dirty ✓ - All existing tests pass ✓ Impact: - Race condition eliminated - concurrent operations are safe - Export with filters now works correctly - No data loss from competing writes Closes bd-52, bd-53 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <noreply@anthropic.com>
109 lines
3.0 KiB
Go
109 lines
3.0 KiB
Go
package main
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import (
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"context"
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"encoding/json"
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"fmt"
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"os"
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"sort"
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"github.com/spf13/cobra"
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"github.com/steveyegge/beads/internal/types"
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)
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var exportCmd = &cobra.Command{
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Use: "export",
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Short: "Export issues to JSONL format",
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Long: `Export all issues to JSON Lines format (one JSON object per line).
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Issues are sorted by ID for consistent diffs.
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Output to stdout by default, or use -o flag for file output.`,
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Run: func(cmd *cobra.Command, args []string) {
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format, _ := cmd.Flags().GetString("format")
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output, _ := cmd.Flags().GetString("output")
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statusFilter, _ := cmd.Flags().GetString("status")
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if format != "jsonl" {
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fmt.Fprintf(os.Stderr, "Error: only 'jsonl' format is currently supported\n")
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os.Exit(1)
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}
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// Build filter
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filter := types.IssueFilter{}
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if statusFilter != "" {
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status := types.Status(statusFilter)
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filter.Status = &status
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}
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// Get all issues
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ctx := context.Background()
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issues, err := store.SearchIssues(ctx, "", filter)
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if err != nil {
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fmt.Fprintf(os.Stderr, "Error: %v\n", err)
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os.Exit(1)
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}
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// Sort by ID for consistent output
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sort.Slice(issues, func(i, j int) bool {
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return issues[i].ID < issues[j].ID
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})
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// Populate dependencies for all issues in one query (avoids N+1 problem)
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allDeps, err := store.GetAllDependencyRecords(ctx)
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if err != nil {
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fmt.Fprintf(os.Stderr, "Error getting dependencies: %v\n", err)
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os.Exit(1)
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}
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for _, issue := range issues {
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issue.Dependencies = allDeps[issue.ID]
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}
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// Open output
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out := os.Stdout
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if output != "" {
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f, err := os.Create(output)
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if err != nil {
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fmt.Fprintf(os.Stderr, "Error creating output file: %v\n", err)
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os.Exit(1)
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}
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defer func() {
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if err := f.Close(); err != nil {
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fmt.Fprintf(os.Stderr, "Warning: failed to close output file: %v\n", err)
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}
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}()
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out = f
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}
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// Write JSONL
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encoder := json.NewEncoder(out)
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exportedIDs := make([]string, 0, len(issues))
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for _, issue := range issues {
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if err := encoder.Encode(issue); err != nil {
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fmt.Fprintf(os.Stderr, "Error encoding issue %s: %v\n", issue.ID, err)
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os.Exit(1)
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}
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exportedIDs = append(exportedIDs, issue.ID)
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}
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// Only clear dirty issues and auto-flush state if exporting to the default JSONL path
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// This prevents clearing dirty flags when exporting to custom paths (e.g., bd export -o backup.jsonl)
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if output == "" || output == findJSONLPath() {
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// Clear only the issues that were actually exported (fixes bd-52 race condition)
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if err := store.ClearDirtyIssuesByID(ctx, exportedIDs); err != nil {
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fmt.Fprintf(os.Stderr, "Warning: failed to clear dirty issues: %v\n", err)
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}
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// Clear auto-flush state since we just manually exported
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// This cancels any pending auto-flush timer and marks DB as clean
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clearAutoFlushState()
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}
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},
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}
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func init() {
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exportCmd.Flags().StringP("format", "f", "jsonl", "Export format (jsonl)")
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exportCmd.Flags().StringP("output", "o", "", "Output file (default: stdout)")
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exportCmd.Flags().StringP("status", "s", "", "Filter by status")
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rootCmd.AddCommand(exportCmd)
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}
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