Steve Yegge 26785f9b46 refactor: remove bd mol catalog in favor of bd formula list (bd-ctmg) ...

- Delete mol_catalog.go (duplicate functionality)
- Update mol.go help text to point to bd formula list
- Update CLI_REFERENCE.md and MOLECULES.md docs
- Update deprecated template.go references

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

2025-12-27 14:34:23 -08:00

..

dev-notes

docs: fix broken relative links across documentation

2025-12-16 00:46:08 -08:00

ADAPTIVE_IDS.md

docs: fix broken relative links across documentation

2025-12-16 00:46:08 -08:00

ADVANCED.md

Merge GH#409

2025-12-16 01:19:07 -08:00

AIDER_INTEGRATION.md

…

ANTIVIRUS.md

feat: add Windows code signing infrastructure (bd-14v0)

2025-12-24 00:07:16 -08:00

ARCHITECTURE.md

Update documentation for bd mol pour/wisp command structure

2025-12-26 23:52:59 -08:00

ATTRIBUTION.md

…

CLAUDE_INTEGRATION.md

docs: document bd setup command

2025-12-16 01:08:42 -08:00

CLAUDE.md

docs: fix broken relative links across documentation

2025-12-16 00:46:08 -08:00

CLI_REFERENCE.md

refactor: remove bd mol catalog in favor of bd formula list (bd-ctmg)

2025-12-27 14:34:23 -08:00

COLLISION_MATH.md

docs: fix broken relative links across documentation

2025-12-16 00:46:08 -08:00

CONFIG.md

fix(docs): standardize sync branch name and daemon syntax (GH#376)

2025-12-25 16:22:09 -08:00

DAEMON.md

fix(docs): standardize sync branch name and daemon syntax (GH#376)

2025-12-25 16:22:09 -08:00

DELETIONS.md

Update documentation for bd mol pour/wisp command structure

2025-12-26 23:52:59 -08:00

ERROR_HANDLING.md

…

EXCLUSIVE_LOCK.md

…

EXTENDING.md

docs: fix broken relative links across documentation

2025-12-16 00:46:08 -08:00

FAQ.md

Merge bd-2k5f-pumpjack: GH#483

2025-12-16 01:18:02 -08:00

GIT_INTEGRATION.md

fix(docs): standardize sync branch name and daemon syntax (GH#376)

2025-12-25 16:22:09 -08:00

graph-links.md

refactor: remove bd mail commands - mail moves to Gas Town

2025-12-20 17:56:46 -08:00

INSTALLING.md

Merge GH#518 setup docs

2025-12-16 01:18:51 -08:00

INTERNALS.md

bd sync: 2025-11-25 11:35:26

2025-11-25 11:35:26 -08:00

LABELS.md

docs: fix broken relative links across documentation

2025-12-16 00:46:08 -08:00

LINTING.md

…

MOLECULES.md

Update documentation for bd mol pour/wisp command structure

2025-12-26 23:52:59 -08:00

MULTI_REPO_AGENTS.md

docs: update beads.jsonl references to issues.jsonl

2025-12-16 01:08:46 -08:00

MULTI_REPO_HYDRATION.md

…

MULTI_REPO_MIGRATION.md

Merge GH#409

2025-12-16 01:19:07 -08:00

PERFORMANCE_TESTING.md

docs: add performance testing guide (bd-zj8e)

2025-11-28 23:26:24 -08:00

PLUGIN.md

feat: add Git worktree compatibility (PR #478)

2025-12-13 12:50:33 -08:00

pr-752-chaos-testing-review.md

Add chaos testing PR #752 review (bd-kx1j)

2025-12-26 17:25:37 -08:00

PROTECTED_BRANCHES.md

fix(docs): standardize sync branch name and daemon syntax (GH#376)

2025-12-25 16:22:09 -08:00

QUICKSTART.md

fix(docs): standardize sync branch name and daemon syntax (GH#376)

2025-12-25 16:22:09 -08:00

README_TESTING.md

DOCTOR IMPROVEMENTS: visual improvements/grouping + add comprehensive tests + fix gosec warnings (#656)

2025-12-20 03:10:06 -08:00

RELEASING.md

docs: fix broken relative links across documentation

2025-12-16 00:46:08 -08:00

ROUTING.md

…

SETUP.md

feat: add Factory.ai (Droid) support to bd setup command (#598)

2025-12-16 13:42:43 -08:00

TESTING_PHILOSOPHY.md

DOCTOR IMPROVEMENTS: visual improvements/grouping + add comprehensive tests + fix gosec warnings (#656)

2025-12-20 03:10:06 -08:00

TESTING.md

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

TROUBLESHOOTING.md

Merge GH#409

2025-12-16 01:19:07 -08:00

UI_PHILOSOPHY.md

feat(ux): reorganize command groups and add Tufte-inspired help styling

2025-12-20 12:57:16 -08:00

ui-philosophy.md

refactor(ui): standardize on lipgloss semantic color system

2025-12-20 17:09:50 -08:00

UNINSTALLING.md

chore: remove obsolete BD_GUIDE.md references

2025-12-20 20:50:33 -08:00

WORKTREES.md

docs(worktrees): Add 'Fully Separate Beads Repository' section (GH#195)

2025-12-25 20:48:59 -08:00