johno/beads
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity
Files
8f4af0a2428f0719f830d3947c7fbcded5f67b30
beads/cmd/bd
T
History
Steve Yegge 8f4af0a242 Fix bd sync failing to copy local changes to beads-sync worktree (GH#810) 
The root cause was isExternalBeadsDir() incorrectly identifying bare repo
worktrees as "external" repos. This caused bd sync to take the "external
beads dir" code path instead of the worktree-based sync branch path.

The bug: isExternalBeadsDir() compared syncbranch.GetRepoRoot() (which returns
incorrect values for bare repo worktrees) with getRepoRootFromPath() (which
uses --show-toplevel). These returned different values for bare repo
worktrees, causing local worktrees to be treated as external.

The fix: Use git rev-parse --git-common-dir for comparison instead of repo
root. This correctly identifies that worktrees of the same repo share the
same git directory, regardless of bare repo setup.

Also added:
- getGitCommonDir() helper function
- Tests for both getGitCommonDir and isExternalBeadsDir

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-30 18:11:08 -08:00
..
doctor
fix(doctor): add redirect to .gitignore template for worktree support (#813)
2025-12-30 18:00:50 -08:00
setup
fix: resolve lint errors blocking CI
2025-12-29 15:58:24 -08:00
templates/hooks
feat: add prepare-commit-msg hook for agent identity trailers (bd-luso)
2025-12-29 21:26:32 -08:00
testdata
…
.gitattributes
…
@AGENTS.md
…
activity_test.go
test: add git helper and guard annotations
2025-12-28 20:48:37 -08:00
activity.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
admin_aliases.go
docs: Document deprecation timeline and add removal warnings (bd-pndo)
2025-12-28 16:40:43 -08:00
admin.go
feat: add bd admin parent command for cleanup/compact/reset (bd-3u8m)
2025-12-27 16:21:08 -08:00
agent_test.go
feat: add bd agent state command for ZFC-compliant state reporting (bd-uxlb)
2025-12-28 01:56:53 -08:00
agent.go
feat: add structured labels for agent beads (bd-g7eq)
2025-12-29 21:15:46 -08:00
AGENTS.md
…
audit.go
…
autoflush.go
refactor: Break up 280-line flushToJSONLWithState into focused helpers (bd-9hc9)
2025-12-28 16:23:45 -08:00
autoimport_test.go
…
autoimport.go
Add debug logging for YAML parse errors in autoimport (bd-mql4)
2025-12-30 16:51:14 -08:00
autostart_test.go
…
cleanup.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
cli_coverage_show_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
cli_fast_test.go
…
close.go
Add 'last touched' issue tracking for update/close without ID
2025-12-30 16:58:10 -08:00
comments_test.go
…
comments.go
docs: Document deprecation timeline and add removal warnings (bd-pndo)
2025-12-28 16:40:43 -08:00
compact_rpc.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
compact_test.go
…
compact_tombstone.go
fix: bd admin compact --older-than=0 now expires all tombstones
2025-12-30 00:00:25 -08:00
compact.go
fix: bd admin compact --older-than=0 now expires all tombstones
2025-12-30 00:00:25 -08:00
config_test.go
…
config.go
fix: Show warning when config.yaml overrides database config (bd-20j)
2025-12-29 14:03:39 -08:00
context.go
Refactor: Introduce CommandContext to consolidate global variables (bd-qobn)
2025-12-30 16:29:28 -08:00
cook_test.go
feat: Compile-time vs runtime cooking (gt-8tmz.23)
2025-12-25 18:40:15 -08:00
cook.go
fix: --var flag now allows commas in values (#786)
2025-12-29 16:17:51 -08:00
count.go
…
create_form_test.go
…
create_form.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
create_test.go
…
create.go
Add 'last touched' issue tracking for update/close without ID
2025-12-30 16:58:10 -08:00
daemon_autoimport_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_autostart_unit_test.go
feat: auto-bypass daemon for wisp operations (bd-ta4r)
2025-12-28 02:11:13 -08:00
daemon_autostart.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_basics_test.go
…
daemon_config.go
…
daemon_crash_test.go
…
daemon_debouncer_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_debouncer.go
…
daemon_event_loop.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_health_freebsd.go
…
daemon_health_solaris.go
fix: add illumos/solaris support for disk space check (#798)
2025-12-29 14:43:00 -08:00
daemon_health_unix.go
fix: add illumos/solaris support for disk space check (#798)
2025-12-29 14:43:00 -08:00
daemon_health_wasm.go
…
daemon_health_windows.go
…
daemon_integration_test.go
…
daemon_lifecycle.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_local_test.go
…
daemon_lock_test.go
…
daemon_lock_unix.go
…
daemon_lock_wasm.go
…
daemon_lock_windows.go
…
daemon_lock.go
…
daemon_logger.go
chore: remove deprecated setupDaemonLoggerLegacy function (bd-2dwo)
2025-12-30 00:27:12 -08:00
daemon_parent_test.go
…
daemon_rotation_test.go
…
daemon_server.go
…
daemon_sync_branch_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_sync_branch.go
fix: bd sync fails to copy local changes TO beads-sync worktree (#810)
2025-12-30 16:49:50 -08:00
daemon_sync_state.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_sync_test.go
…
daemon_sync.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_test.go
…
daemon_unix_test.go
…
daemon_unix.go
…
daemon_wasm.go
…
daemon_watcher_platform_test.go
…
daemon_watcher_test.go
…
daemon_watcher.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_windows.go
…
daemon.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemons_test.go
…
daemons.go
docs: Document deprecation timeline and add removal warnings (bd-pndo)
2025-12-28 16:40:43 -08:00
defer.go
…
delete_rpc_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
delete_test.go
…
delete.go
fix: bd delete --cascade now recursively deletes dependents (#787)
2025-12-29 15:10:59 -08:00
deletion_tracking_test.go
…
deletion_tracking.go
…
dep_test.go
…
dep.go
feat: add refs field for cross-references with relationship types (bd-irah)
2025-12-30 15:52:33 -08:00
detect_pollution.go
docs: Document deprecation timeline and add removal warnings (bd-pndo)
2025-12-28 16:40:43 -08:00
direct_mode_test.go
…
direct_mode.go
Refactor: Introduce CommandContext to consolidate global variables (bd-qobn)
2025-12-30 16:29:28 -08:00
docs.md
…
doctor_fix.go
fix(doctor): wire up CheckRedirectNotTracked and FixRedirectTracking
2025-12-30 18:01:58 -08:00
doctor_health.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
doctor_pollution.go
fix: Add nolint comments for gosec/errcheck/unparam warnings
2025-12-29 14:39:43 -08:00
doctor_repair_chaos_test.go
test: add git helper and guard annotations
2025-12-28 20:48:37 -08:00
doctor_repair_test.go
test: add git helper and guard annotations
2025-12-28 20:48:37 -08:00
doctor_test.go
test: add git helper and guard annotations
2025-12-28 20:48:37 -08:00
doctor.go
fix(doctor): wire up CheckRedirectNotTracked and FixRedirectTracking
2025-12-30 18:01:58 -08:00
duplicate.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
duplicates_test.go
…
duplicates.go
…
edit.go
fix: Add nolint comments for gosec/errcheck/unparam warnings
2025-12-29 14:39:43 -08:00
epic_test.go
…
epic.go
fix: Use FatalErrorRespectJSON across all commands (bd-28sq)
2025-12-25 13:56:19 -08:00
errors.go
…
export_import_test.go
Add close_reason to JSONL format documentation and tests (bd-lxzx)
2025-12-30 17:05:48 -08:00
export_integrity_integration_test.go
…
export_mtime_test.go
…
export_staleness_test.go
…
export_test.go
…
export.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
external_ref_test.go
…
flags.go
…
flush_manager_test.go
…
flush_manager.go
…
fork_protection_test.go
…
fork_protection.go
…
formula.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
gate.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
git_sync_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
git_test_helpers.go
test: add git helper and guard annotations
2025-12-28 20:48:37 -08:00
graph_test.go
…
graph.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
helpers_test.go
…
hooks_test.go
Add unit tests to improve cmd/bd CLI coverage (bd-llfl)
2025-12-30 17:14:55 -08:00
hooks.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
human.go
Add bd human command for focused help menu
2025-12-29 14:33:19 -08:00
import_bug_test.go
…
import_cancellation_test.go
…
import_helpers_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
import_idempotent_test.go
…
import_mtime_test.go
…
import_multipart_id_test.go
…
import_profile_test.go
…
import_shared.go
…
import_uncommitted_test.go
…
import.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
info_test.go
…
info.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
init_agent.go
refactor: Split init.go from 1928 to 705 lines (bd-xtf5)
2025-12-28 18:43:09 -08:00
init_contributor.go
…
init_git_hooks.go
refactor: Split init.go from 1928 to 705 lines (bd-xtf5)
2025-12-28 18:43:09 -08:00
init_hooks_test.go
test: add git helper and guard annotations
2025-12-28 20:48:37 -08:00
init_stealth.go
refactor: Split init.go from 1928 to 705 lines (bd-xtf5)
2025-12-28 18:43:09 -08:00
init_team.go
…
init_templates.go
refactor: Split init.go from 1928 to 705 lines (bd-xtf5)
2025-12-28 18:43:09 -08:00
init_test.go
fix: remove gitignore negations that override fork protection (#796)
2025-12-29 14:52:29 -08:00
init.go
fix: prevent sync.branch from being set to main/master (#807)
2025-12-30 16:45:51 -08:00
integrity_content_test.go
…
integrity_test.go
…
integrity.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
jira_test.go
Implement Jira issue timestamp comparison for sync (bd-0qx5)
2025-12-30 16:07:31 -08:00
jira.go
Implement Jira issue timestamp comparison for sync (bd-0qx5)
2025-12-30 16:07:31 -08:00
jsonl_integrity_test.go
…
label_test.go
…
label.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
last_touched_test.go
Add 'last touched' issue tracking for update/close without ID
2025-12-30 16:58:10 -08:00
last_touched.go
Add 'last touched' issue tracking for update/close without ID
2025-12-30 16:58:10 -08:00
linear_conflict.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
linear_sync.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
linear_test.go
…
linear.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
list_helpers_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
list_test.go
Add unit tests to improve cmd/bd CLI coverage (bd-llfl)
2025-12-30 17:14:55 -08:00
list.go
Add BD_AGENT_MODE for ultra-compact output
2025-12-30 16:04:39 -08:00
mail.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
main_daemon.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
main_errors.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
main_help.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
main_test.go
…
main.go
Fix BD_ACTOR handling in direct mode paths
2025-12-30 16:51:14 -08:00
markdown_test.go
…
markdown.go
…
merge_security_test.go
…
merge.go
…
migrate_hash_ids_test.go
…
migrate_hash_ids.go
feat: integrate migration detection into bd doctor (bd-7l27)
2025-12-30 00:06:42 -08:00
migrate_issues.go
feat: integrate migration detection into bd doctor (bd-7l27)
2025-12-30 00:06:42 -08:00
migrate_sync_test.go
…
migrate_sync.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
migrate_test.go
…
migrate_tombstones.go
feat: integrate migration detection into bd doctor (bd-7l27)
2025-12-30 00:06:42 -08:00
migrate.go
feat: integrate migration detection into bd doctor (bd-7l27)
2025-12-30 00:06:42 -08:00
mol_bond.go
fix: rename BondRef.ProtoID to SourceID for clarity (bd-ia3g)
2025-12-30 00:40:16 -08:00
mol_burn.go
feat: bd mol burn now works on mols, not just wisps (bd-l6yk)
2025-12-29 17:10:26 -08:00
mol_current.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
mol_distill.go
fix: --var flag now allows commas in values (#786)
2025-12-29 16:17:51 -08:00
mol_show.go
…
mol_squash.go
refactor: remove Gas Town references from codebase
2025-12-30 14:13:32 -08:00
mol_stale.go
feat: add daemon RPC endpoints for config and mol stale (bd-ag35)
2025-12-30 06:59:51 -08:00
mol_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
mol.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
nodb_test.go
Refactor: Introduce CommandContext to consolidate global variables (bd-qobn)
2025-12-30 16:29:28 -08:00
nodb.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
onboard_test.go
…
onboard.go
…
orphans_test.go
test: improve nodb and orphans coverage
2025-12-29 14:17:44 -08:00
orphans.go
test: improve nodb and orphans coverage
2025-12-29 14:17:44 -08:00
output_test.go
…
periodic_remote_sync_test.go
…
pour.go
fix: --var flag now allows commas in values (#786)
2025-12-29 16:17:51 -08:00
prime_test.go
…
prime.go
feat: show redirect info in bd prime output (bd-kblo)
2025-12-27 21:33:01 -08:00
quick.go
…
quickstart.go
…
readonly_test.go
…
ready_test.go
…
ready.go
feat: Add mol_type schema field for molecule type classification (bd-oxgi)
2025-12-28 19:52:51 -08:00
reinit_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
relate_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
relate.go
docs: Document deprecation timeline and add removal warnings (bd-pndo)
2025-12-28 16:40:43 -08:00
rename_prefix_repair_test.go
…
rename_prefix_test.go
fix: remove arbitrary 8-char prefix limit from rename-prefix (GH#770)
2025-12-27 22:24:19 -08:00
rename_prefix.go
fix: remove arbitrary 8-char prefix limit from rename-prefix (GH#770)
2025-12-27 22:24:19 -08:00
reopen_test.go
…
reopen.go
…
repair_deps_test.go
…
repair_orphans_test.go
feat: Add bd repair command for orphaned foreign key refs (hq-2cchm)
2025-12-29 12:43:22 -08:00
repair.go
fix: bd repair - consistent JSON error handling for find operations
2025-12-29 13:16:47 -08:00
repo.go
…
reset_test.go
…
reset.go
feat: add bd admin parent command for cleanup/compact/reset (bd-3u8m)
2025-12-27 16:21:08 -08:00
restore_test.go
…
restore.go
…
routed.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
sandbox_test.go
…
sandbox_unix.go
…
sandbox_windows.go
…
scripttest_test.go
…
search_test.go
…
search.go
…
setup.go
…
ship.go
…
show_thread.go
refactor: Split large cmd/bd files to meet 800-line limit (bd-xtf5)
2025-12-28 18:43:09 -08:00
show_unit_helpers_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
show_unit_helpers.go
Centralize validation patterns with composable validators (bd-jbqx)
2025-12-30 16:00:22 -08:00
show.go
Add 'last touched' issue tracking for update/close without ID
2025-12-30 16:58:10 -08:00
simple_helpers_test.go
…
slot.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
snapshot_manager.go
…
stale_test.go
…
stale.go
…
staleness.go
…
state_test.go
feat: add bd state and bd set-state helper commands (bd-7l67)
2025-12-30 15:57:08 -08:00
state.go
feat: add bd state and bd set-state helper commands (bd-7l67)
2025-12-30 15:57:08 -08:00
status_test.go
…
status.go
…
swarm.go
fix: Add nolint comments for gosec/errcheck/unparam warnings
2025-12-29 14:39:43 -08:00
sync_branch_priority_test.go
fix: bypass gitHasBeadsChanges when using sync-branch (#812)
2025-12-30 18:04:26 -08:00
sync_branch.go
Fix bd sync failing to copy local changes to beads-sync worktree (GH#810)
2025-12-30 18:11:08 -08:00
sync_check.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
sync_export.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
sync_git.go
fix: resolve lint errors blocking CI
2025-12-29 15:58:24 -08:00
sync_helpers_more_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
sync_import.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
sync_local_only_test.go
…
sync_merge_test.go
…
sync_test.go
Fix bd sync failing to copy local changes to beads-sync worktree (GH#810)
2025-12-30 18:11:08 -08:00
sync.go
fix: bypass gitHasBeadsChanges when using sync-branch (#812)
2025-12-30 18:04:26 -08:00
template_test.go
…
template.go
fix: --var flag now allows commas in values (#786)
2025-12-29 16:17:51 -08:00
test_guard_helpers.go
test: add git helper and guard annotations
2025-12-28 20:48:37 -08:00
test_helpers_test.go
Refactor: Introduce CommandContext to consolidate global variables (bd-qobn)
2025-12-30 16:29:28 -08:00
test_repo_beads_guard_test.go
Refactor: Introduce CommandContext to consolidate global variables (bd-qobn)
2025-12-30 16:29:28 -08:00
test_wait_helper.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
thanks.go
refactor: relocate thanks command to bd info --thanks (bd-wb9g)
2025-12-27 16:08:34 -08:00
thread_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
tips_example_test.go
…
tips_test.go
…
tips.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
undefer.go
…
update.go
feat: Add --claim flag to bd update for work queue semantics (gt-il2p7)
2025-12-30 18:09:34 -08:00
upgrade.go
…
utils_unit_test.go
Add unit tests to improve cmd/bd CLI coverage (bd-llfl)
2025-12-30 17:14:55 -08:00
version_test.go
Refactor: Introduce CommandContext to consolidate global variables (bd-qobn)
2025-12-30 16:29:28 -08:00
version_tracking_test.go
Add unit tests to improve cmd/bd CLI coverage (bd-llfl)
2025-12-30 17:14:55 -08:00
version_tracking.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
version.go
chore: Bump version to 0.41.0
2025-12-29 16:34:14 -08:00
where.go
feat: add 'bd where' command to show active beads location (bd-8x43)
2025-12-27 21:27:44 -08:00
wisp.go
fix: --var flag now allows commas in values (#786)
2025-12-29 16:17:51 -08:00
worktree_cmd.go
fix: Add nolint comments for gosec/errcheck/unparam warnings
2025-12-29 14:39:43 -08:00
worktree_daemon_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
worktree_test.go
…
worktree.go
…