- bd repo add/remove now writes to .beads/config.yaml instead of database - bd repo remove deletes hydrated issues from the removed repo - Added internal/config/repos.go for YAML config manipulation - Added DeleteIssuesBySourceRepo for cleanup on remove Fixes config disconnect where bd repo add wrote to DB but hydration read from YAML. Breaking change: bd repo add no longer accepts optional alias argument. Co-authored-by: Dylan Conlin <dylan.conlin@gmail.com> 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>