- Creates TestTwoCloneCollision integration test
- Sets up 2 independent clones with git hooks and daemons
- Both file issues with same ID (test-1)
- Demonstrates databases don't converge after collision resolution
- Clone A: test-1='Issue from clone A', test-2='Issue from clone B'
- Clone B: test-1='Issue from clone B', test-2='Issue from clone A'
- Git status shows dirty state in both clones
- Test proves beads fails at basic multi-agent workflow
Also adds --json flag to create, ready, and list commands for
better test integration.
Amp-Thread-ID: https://ampcode.com/threads/T-8fa0ab6c-2226-4f9b-8e11-14e1156537fc
Co-authored-by: Amp <amp@ampcode.com>