Adds --from-jsonl flag that imports from the current working tree's .beads/issues.jsonl file instead of scanning git history. This prevents deleted issues from being resurrected during re-initialization. Use case: After running bd compact --purge-tombstones and committing the cleaned JSONL, a subsequent bd init would previously re-import all historical issues from git, defeating the cleanup. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>