- Add `bd molecule list` to list template molecules
- Add `bd molecule show` to show molecule details
- Add `bd molecule instantiate` to create work items from templates
- Exclude templates from `bd list` by default (use --include-templates)
- Reject mutations (update/close/delete) to template issues
- Add IncludeTemplates to RPC ListArgs for daemon mode
Templates are marked with is_template=true and are read-only.
Use `bd molecule instantiate` to create editable work items.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>