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dedf5cfe92762d55fcf434c2d61e56ff9e106fe5
beads/cmd/bd
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Steve Yegge efb56e9dd8 refactor: Break up 280-line flushToJSONLWithState into focused helpers (bd-9hc9) 
Extracted 8 helper functions from the monolithic flushToJSONLWithState:

- recordFlushFailure/recordFlushSuccess: Failure tracking and counter management
- readExistingJSONL: Parse existing JSONL file for incremental merging
- fetchAndMergeIssues: Fetch dirty issues from DB and merge into map
- filterWisps: Remove ephemeral (wisp) issues from export
- filterByMultiRepoPrefix: Multi-repo prefix filtering for non-primary repos
- updateFlushExportMetadata: Store hashes and timestamps after export
- getIssuesToExport: Determine full vs incremental export issue list

Main function now reads as a clear pipeline:
1. Validate integrity -> 2. Get issues -> 3. Read existing JSONL
4. Merge from DB -> 5. Filter wisps -> 6. Filter by prefix
7. Write atomically -> 8. Update metadata

Benefits:
- Each helper is single-responsibility and testable
- Main function reduced from ~280 to ~94 lines
- Logic is clearly separated and documented
- Easier to understand and maintain

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-28 16:23:45 -08:00
..
doctor
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
setup
Add tests for setup package (28.4% → 53.8% coverage)
2025-12-23 22:40:16 -08:00
templates/hooks
chore: Bump version to 0.39.1
2025-12-27 22:33:05 -08:00
testdata
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
.gitattributes
…
@AGENTS.md
…
activity_test.go
fix: emit rich mutation events for status changes (bd-313v)
2025-12-23 04:16:26 -08:00
activity.go
Improve activity feed with title and assignee context
2025-12-28 10:06:08 -08:00
admin_aliases.go
feat: add bd admin parent command for cleanup/compact/reset (bd-3u8m)
2025-12-27 16:21:08 -08:00
admin.go
feat: add bd admin parent command for cleanup/compact/reset (bd-3u8m)
2025-12-27 16:21:08 -08:00
agent_test.go
feat: add bd agent state command for ZFC-compliant state reporting (bd-uxlb)
2025-12-28 01:56:53 -08:00
agent.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
AGENTS.md
…
audit.go
…
autoflush.go
refactor: Break up 280-line flushToJSONLWithState into focused helpers (bd-9hc9)
2025-12-28 16:23:45 -08:00
autoimport_test.go
…
autoimport.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
autostart_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
cleanup.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
cli_coverage_show_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
cli_fast_test.go
refactor: remove legacy autoflush code paths (bd-xsl9)
2025-12-23 01:56:19 -08:00
comments_test.go
…
comments.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
compact_test.go
feat(compact): Add --prune mode for standalone tombstone pruning (bd-c7y5)
2025-12-24 00:08:10 -08:00
compact.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
config_test.go
…
config.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
cook_test.go
feat: Compile-time vs runtime cooking (gt-8tmz.23)
2025-12-25 18:40:15 -08:00
cook.go
refactor: Consolidate duplicated step collection functions in cook.go (bd-9btu)
2025-12-28 16:15:17 -08:00
count.go
feat: add gate issue type and CLI commands for async coordination (bd-udsi)
2025-12-23 12:06:42 -08:00
create_form_test.go
…
create_form.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
create_test.go
…
create.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_autoimport_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_autostart_unit_test.go
feat: auto-bypass daemon for wisp operations (bd-ta4r)
2025-12-28 02:11:13 -08:00
daemon_autostart.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_basics_test.go
…
daemon_config.go
…
daemon_crash_test.go
…
daemon_debouncer_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_debouncer.go
…
daemon_event_loop.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_health_freebsd.go
…
daemon_health_unix.go
…
daemon_health_wasm.go
…
daemon_health_windows.go
…
daemon_integration_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
daemon_lifecycle.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_local_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
daemon_lock_test.go
…
daemon_lock_unix.go
…
daemon_lock_wasm.go
…
daemon_lock_windows.go
…
daemon_lock.go
…
daemon_logger.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
daemon_parent_test.go
…
daemon_rotation_test.go
…
daemon_server.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
daemon_sync_branch_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_sync_branch.go
fix(sync): respect sync.remote config in daemon sync operations (#736)
2025-12-24 12:43:18 -08:00
daemon_sync_state.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemon_sync_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
daemon_sync.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_test.go
…
daemon_unix_test.go
…
daemon_unix.go
…
daemon_wasm.go
…
daemon_watcher_platform_test.go
…
daemon_watcher_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
daemon_watcher.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
daemon_windows.go
…
daemon.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
daemons_test.go
…
daemons.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
defer.go
…
delete_rpc_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
delete_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
delete.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
deletion_tracking_test.go
…
deletion_tracking.go
…
dep_test.go
feat(deps): detect/prevent child→parent dependency anti-pattern (bd-nim5)
2025-12-24 13:03:27 -08:00
dep.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
detect_pollution.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
direct_mode_test.go
refactor: remove legacy autoflush code paths (bd-xsl9)
2025-12-23 01:56:19 -08:00
direct_mode.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
docs.md
…
doctor_repair_chaos_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
doctor_repair_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
doctor_test.go
Release v0.40.0
2025-12-28 10:59:02 -08:00
doctor.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
duplicate.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
duplicates_test.go
…
duplicates.go
…
epic_test.go
…
epic.go
fix: Use FatalErrorRespectJSON across all commands (bd-28sq)
2025-12-25 13:56:19 -08:00
errors.go
fix(json): standardize JSON output for errors and empty arrays (bd-au0.7)
2025-12-24 00:07:52 -08:00
export_import_test.go
…
export_integrity_integration_test.go
…
export_mtime_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
export_staleness_test.go
…
export_test.go
…
export.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
external_ref_test.go
…
flags.go
…
flush_manager_test.go
refactor: remove legacy autoflush code paths (bd-xsl9)
2025-12-23 01:56:19 -08:00
flush_manager.go
…
fork_protection_test.go
…
fork_protection.go
…
formula.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
gate.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
git_sync_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
graph_test.go
…
graph.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
helpers_test.go
…
hooks_test.go
…
hooks.go
…
import_bug_test.go
…
import_cancellation_test.go
…
import_helpers_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
import_idempotent_test.go
…
import_mtime_test.go
…
import_multipart_id_test.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
import_profile_test.go
…
import_shared.go
…
import_uncommitted_test.go
…
import.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
info_test.go
…
info.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
init_contributor.go
…
init_hooks_test.go
…
init_team.go
…
init_test.go
…
init.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
integrity_content_test.go
…
integrity_test.go
…
integrity.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
jira_test.go
…
jira.go
…
jsonl_integrity_test.go
…
label_test.go
…
label.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
linear_test.go
…
linear.go
…
list_helpers_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
list_test.go
…
list.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
mail.go
…
main_test.go
refactor: remove legacy autoflush code paths (bd-xsl9)
2025-12-23 01:56:19 -08:00
main.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
markdown_test.go
…
markdown.go
…
merge_security_test.go
…
merge.go
…
migrate_hash_ids_test.go
…
migrate_hash_ids.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
migrate_issues.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
migrate_sync_test.go
…
migrate_sync.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
migrate_test.go
…
migrate_tombstones.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
migrate.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
mol_bond.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
mol_burn.go
feat: auto-bypass daemon for wisp operations (bd-ta4r)
2025-12-28 02:11:13 -08:00
mol_current.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
mol_distill.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
mol_show.go
feat: add parallel step detection for molecules (bd-xo1o.4)
2025-12-23 03:57:08 -08:00
mol_squash.go
feat: auto-bypass daemon for wisp operations (bd-ta4r)
2025-12-28 02:11:13 -08:00
mol_stale.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
mol_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
mol.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
nodb_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
nodb.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
onboard_test.go
…
onboard.go
…
orphans_test.go
feat: Add 'bd orphans' command with DRY refactoring of orphan detection
2025-12-27 17:23:45 -08:00
orphans.go
feat: Add 'bd orphans' command with DRY refactoring of orphan detection
2025-12-27 17:23:45 -08:00
output_test.go
…
periodic_remote_sync_test.go
…
pour.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
prime_test.go
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prime.go
feat: show redirect info in bd prime output (bd-kblo)
2025-12-27 21:33:01 -08:00
quick.go
…
quickstart.go
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readonly_test.go
…
ready_test.go
…
ready.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
reinit_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
relate_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
relate.go
Consolidate CLI commands to reduce top-level surface area
2025-12-28 13:52:21 -08:00
rename_prefix_repair_test.go
…
rename_prefix_test.go
fix: remove arbitrary 8-char prefix limit from rename-prefix (GH#770)
2025-12-27 22:24:19 -08:00
rename_prefix.go
fix: remove arbitrary 8-char prefix limit from rename-prefix (GH#770)
2025-12-27 22:24:19 -08:00
reopen_test.go
…
reopen.go
…
repair_deps_test.go
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repo.go
…
reset_test.go
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reset.go
feat: add bd admin parent command for cleanup/compact/reset (bd-3u8m)
2025-12-27 16:21:08 -08:00
restore_test.go
…
restore.go
…
routed.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
sandbox_test.go
…
sandbox_unix.go
…
sandbox_windows.go
…
scripttest_test.go
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search_test.go
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search.go
bd sync: 2025-12-23 23:38:57
2025-12-24 00:06:41 -08:00
setup.go
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ship.go
…
show_unit_helpers_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
show_unit_helpers.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
show.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
simple_helpers_test.go
…
slot.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
snapshot_manager.go
…
stale_test.go
fix(json): audit and standardize JSON output across commands (bd-au0.7)
2025-12-24 00:10:14 -08:00
stale.go
fix(json): audit and standardize JSON output across commands (bd-au0.7)
2025-12-24 00:10:14 -08:00
staleness.go
…
status_test.go
…
status.go
…
sync_branch_priority_test.go
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sync_branch.go
fix: Prevent bd sync from committing non-.beads files (bd-trgb)
2025-12-25 12:05:46 -08:00
sync_check.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
sync_export.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
sync_helpers_more_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
sync_import.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
sync_local_only_test.go
…
sync_merge_test.go
…
sync_test.go
…
sync.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
template_test.go
fix: mol run loads all hierarchical children + supports title lookup (bd-c8d5, bd-drcx)
2025-12-24 23:33:34 -08:00
template.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
test_helpers_test.go
…
test_repo_beads_guard_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
test_wait_helper.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
thanks.go
refactor: relocate thanks command to bd info --thanks (bd-wb9g)
2025-12-27 16:08:34 -08:00
thread_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
tips_example_test.go
…
tips_test.go
…
tips.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
undefer.go
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upgrade.go
…
version_test.go
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version_tracking_test.go
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version_tracking.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
version.go
Release v0.40.0
2025-12-28 10:59:02 -08:00
where.go
feat: add 'bd where' command to show active beads location (bd-8x43)
2025-12-27 21:27:44 -08:00
wisp.go
chore: remove issue ID references from comments and changelogs
2025-12-28 10:05:16 -08:00
worktree_cmd.go
fix: address code review issues in bd worktree command
2025-12-28 01:07:38 -08:00
worktree_daemon_test.go
refactor: remove unused bd pin/unpin/hook commands (bd-x0zl)
2025-12-27 16:02:15 -08:00
worktree_test.go
…
worktree.go
…