refactor: formulas use YAML instead of JSON (gt-8tmz)
- Convert .formula.json files to .formula.yaml - Update molecule-algebra.md to specify YAML format - Update molecular-chemistry.md proto examples - Add Safety Constraints section: cycle detection, aspect self-matching prevention, max expansion depth, graceful degradation 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
This commit is contained in:
@@ -1,32 +0,0 @@
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{
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"formula": "rule-of-five",
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"type": "expansion",
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"description": "Jeffrey Emanuel's discovery: LLM agents produce best work through 4-5 iterative refinements. Breadth-first exploration, then editorial passes.",
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"version": 1,
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"template": [
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{
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"id": "{target}.draft",
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"description": "Initial attempt at: {target.description}. Don't aim for perfection. Get the shape right. Breadth over depth."
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},
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{
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"id": "{target}.refine-1",
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"description": "First refinement pass. Focus: CORRECTNESS. Fix errors, bugs, mistakes. Is the logic sound?",
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"needs": ["{target}.draft"]
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},
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{
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"id": "{target}.refine-2",
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"description": "Second refinement pass. Focus: CLARITY. Can someone else understand this? Simplify. Remove jargon.",
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"needs": ["{target}.refine-1"]
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},
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{
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"id": "{target}.refine-3",
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"description": "Third refinement pass. Focus: EDGE CASES. What could go wrong? What's missing? Handle the unusual.",
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"needs": ["{target}.refine-2"]
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},
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{
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"id": "{target}.refine-4",
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"description": "Final polish. Focus: EXCELLENCE. This is the last pass. Make it shine. Is this something you'd be proud to ship?",
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"needs": ["{target}.refine-3"]
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}
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]
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}
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@@ -0,0 +1,35 @@
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formula: rule-of-five
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type: expansion
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description: >
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Jeffrey Emanuel's discovery: LLM agents produce best work through 4-5
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iterative refinements. Breadth-first exploration, then editorial passes.
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version: 1
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template:
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- id: "{target}.draft"
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description: >
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Initial attempt at: {target.description}. Don't aim for perfection.
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Get the shape right. Breadth over depth.
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- id: "{target}.refine-1"
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description: >
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First refinement pass. Focus: CORRECTNESS. Fix errors, bugs, mistakes.
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Is the logic sound?
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needs: ["{target}.draft"]
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- id: "{target}.refine-2"
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description: >
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Second refinement pass. Focus: CLARITY. Can someone else understand
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this? Simplify. Remove jargon.
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needs: ["{target}.refine-1"]
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- id: "{target}.refine-3"
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description: >
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Third refinement pass. Focus: EDGE CASES. What could go wrong?
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What's missing? Handle the unusual.
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needs: ["{target}.refine-2"]
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- id: "{target}.refine-4"
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description: >
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Final polish. Focus: EXCELLENCE. This is the last pass. Make it shine.
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Is this something you'd be proud to ship?
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needs: ["{target}.refine-3"]
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@@ -1,35 +0,0 @@
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{
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"formula": "security-audit",
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"type": "aspect",
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"description": "Cross-cutting security concern. Applies security scanning before and after implementation steps.",
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"version": 1,
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"pointcuts": [
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{"glob": "*.implement"},
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{"glob": "*.submit"}
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],
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"advice": {
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"around": {
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"before": [
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{
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"id": "security-prescan",
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"description": "Pre-implementation security check. Review for secrets/credentials in scope. Check dependencies for known vulnerabilities.",
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"args": {"target": "{step.id}"}
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}
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],
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"after": [
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{
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"id": "security-postscan",
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"description": "Post-implementation security scan. Scan new code for vulnerabilities (SAST). Check for hardcoded secrets. Review for OWASP Top 10 issues.",
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"args": {"target": "{step.id}"},
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"output": {"approved": "boolean", "findings": "list"}
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},
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{
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"gate": {
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"condition": "security-postscan.output.approved == true",
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"message": "Security approval required before proceeding"
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}
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}
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]
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}
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}
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}
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@@ -0,0 +1,31 @@
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formula: security-audit
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type: aspect
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description: >
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Cross-cutting security concern. Applies security scanning before and
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after implementation steps.
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version: 1
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pointcuts:
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- glob: "*.implement"
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- glob: "*.submit"
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advice:
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around:
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before:
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- id: security-prescan
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description: >
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Pre-implementation security check. Review for secrets/credentials
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in scope. Check dependencies for known vulnerabilities.
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args:
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target: "{step.id}"
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after:
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- id: security-postscan
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description: >
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Post-implementation security scan. Scan new code for vulnerabilities
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(SAST). Check for hardcoded secrets. Review for OWASP Top 10 issues.
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args:
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target: "{step.id}"
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output:
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approved: boolean
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findings: list
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- gate:
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condition: "security-postscan.output.approved == true"
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message: Security approval required before proceeding
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@@ -1,53 +0,0 @@
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{
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"formula": "shiny-enterprise",
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"extends": "shiny",
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"description": "Enterprise-grade engineering workflow. Shiny + Rule of Five + Security + Performance Testing + Review Loop.",
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"version": 1,
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"compose": [
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{
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"expand": {
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"target": "implement",
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"with": "rule-of-five"
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}
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},
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{
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"aspect": {
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"pointcut": "implement.*",
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"with": "security-audit"
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}
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},
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{
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"gate": {
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"before": "submit",
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"condition": "security-postscan.approved == true",
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"message": "Cannot submit without security approval"
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}
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},
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{
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"branch": {
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"from": "implement.refine-4",
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"steps": [
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{"id": "perf-test", "description": "Run performance benchmarks"},
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{"id": "load-test", "description": "Run load/stress tests"},
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{"id": "chaos-test", "description": "Run chaos engineering tests"}
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],
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"join": "review"
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}
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},
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{
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"loop": {
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"step": "review",
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"until": "review.output.approved == true",
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"max": 3,
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"on-max": "escalate"
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}
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},
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{
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"advice": {
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"target": "*",
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"before": {"id": "log-start", "description": "Log: Starting {step.id}"},
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"after": {"id": "log-end", "description": "Log: Completed {step.id}"}
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}
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}
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]
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}
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@@ -0,0 +1,45 @@
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formula: shiny-enterprise
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extends: shiny
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description: >
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Enterprise-grade engineering workflow. Shiny + Rule of Five + Security +
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Performance Testing + Review Loop.
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version: 1
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compose:
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- expand:
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target: implement
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with: rule-of-five
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- aspect:
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pointcut: "implement.*"
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with: security-audit
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- gate:
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before: submit
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condition: "security-postscan.approved == true"
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message: Cannot submit without security approval
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- branch:
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from: implement.refine-4
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steps:
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- id: perf-test
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description: Run performance benchmarks
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- id: load-test
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description: Run load/stress tests
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- id: chaos-test
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description: Run chaos engineering tests
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join: review
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- loop:
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step: review
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until: "review.output.approved == true"
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max: 3
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on-max: escalate
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- advice:
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target: "*"
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before:
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id: log-start
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description: "Log: Starting {step.id}"
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after:
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id: log-end
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description: "Log: Completed {step.id}"
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@@ -1,35 +0,0 @@
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{
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"formula": "shiny",
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"description": "Engineer in a Box - the canonical right way. Design before you code. Review before you ship. Test before you submit.",
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"version": 1,
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"vars": {
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"feature": "{{feature}}",
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"assignee": "{{assignee}}"
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},
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"steps": [
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{
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"id": "design",
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"description": "Think carefully about architecture before writing code. Consider: How does this fit into the existing system? What are the edge cases? What could go wrong? Is there a simpler approach?"
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},
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{
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"id": "implement",
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"description": "Write the code for {{feature}}. Follow the design. Keep it simple. Don't gold-plate.",
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"needs": ["design"]
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},
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{
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"id": "review",
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"description": "Review the implementation. Check for: Does it match the design? Are there obvious bugs? Is it readable and maintainable? Are there security concerns?",
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"needs": ["implement"]
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},
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{
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"id": "test",
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"description": "Write and run tests. Unit tests for new code, integration tests if needed, run the full test suite, fix any regressions.",
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"needs": ["review"]
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},
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{
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"id": "submit",
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"description": "Submit for merge. Final check: git status, git diff. Commit with clear message. Push and create PR.",
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"needs": ["test"]
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}
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]
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}
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@@ -0,0 +1,39 @@
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formula: shiny
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description: >
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Engineer in a Box - the canonical right way. Design before you code.
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Review before you ship. Test before you submit.
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version: 1
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vars:
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feature: "{{feature}}"
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assignee: "{{assignee}}"
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steps:
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- id: design
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description: >
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Think carefully about architecture before writing code. Consider:
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How does this fit into the existing system? What are the edge cases?
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What could go wrong? Is there a simpler approach?
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- id: implement
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description: >
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Write the code for {{feature}}. Follow the design. Keep it simple.
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Don't gold-plate.
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needs: [design]
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- id: review
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description: >
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Review the implementation. Check for: Does it match the design?
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Are there obvious bugs? Is it readable and maintainable?
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Are there security concerns?
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needs: [implement]
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- id: test
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description: >
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Write and run tests. Unit tests for new code, integration tests
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if needed, run the full test suite, fix any regressions.
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needs: [review]
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- id: submit
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description: >
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Submit for merge. Final check: git status, git diff. Commit with
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clear message. Push and create PR.
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needs: [test]
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