docs: consolidate Rig/Cook/Run into molecular-chemistry.md (gt-8tmz.32)
- Add Work Lifecycle section (Rig → Cook → Run phases) - Add Complete Artifact Graph showing full generation/bond relationships - Add Two Composition Operators section (rig vs bond distinction) - Add Formulas section covering source layer above protos - Add symmetric Bond Table - Update vocabulary appendix with new terms - Redirect rig-cook-run.md to consolidated doc - Update references in molecule-algebra.md and vision.md 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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# Rig, Cook, Run: The Gas Town Work Lifecycle
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# Rig, Cook, Run
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> **Status**: Canonical specification
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> **Discovery**: 2025-12-23
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## The Three Phases
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Gas Town work flows through three phases:
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```
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RIG ────→ COOK ────→ RUN
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```
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| Phase | What Happens | Input | Output |
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|-------|--------------|-------|--------|
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| **Rig** | Compose formulas | Formula YAML | Compound Formula |
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| **Cook** | Instantiate work | Formula/Proto | Proto/Mol/Wisp |
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| **Run** | Execute steps | Mol/Wisp | Work done |
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## Phase 1: Rig (Authoring)
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**Rigging** is source-level composition. You write formula YAML files that
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reference and compose other formulas.
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```yaml
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# shiny-enterprise.formula.yaml
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formula: shiny-enterprise
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extends: shiny # ← rigging: inherit from shiny
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compose:
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- expand:
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target: implement
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with: rule-of-five # ← rigging: expand with macro
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- aspect:
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pointcut: "implement.*"
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with: security-audit # ← rigging: weave in aspect
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```
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**Rig operators** (in formula YAML):
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- `extends` - inherit from another formula
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- `compose` - apply transformations (expand, aspect, gate, loop, branch)
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**Rigging is static** - it happens before cooking, at authoring time.
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## Phase 2: Cook (Instantiation)
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**Cooking** transforms formulas into executable work.
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```bash
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bd cook shiny-enterprise # Formula → Proto (flat, expanded)
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bd pour shiny-enterprise # Proto → Mol (liquid, persistent)
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bd wisp shiny-enterprise # Proto → Wisp (vapor, ephemeral)
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```
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**Cook produces three artifact types:**
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| Command | Output | Phase of Matter | Storage |
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|---------|--------|-----------------|---------|
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| `bd cook` | Proto | Solid (frozen) | `.beads/` |
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| `bd pour` | Mol | Liquid (flowing) | `.beads/` |
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| `bd wisp` | Wisp | Vapor (ephemeral) | `.beads-wisp/` |
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**Cooking is deterministic** - same formula always produces same structure.
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## Phase 3: Run (Execution)
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**Running** executes the steps in a mol or wisp.
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```bash
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gt sling shiny-enterprise polecat/alpha # Cook + assign + run
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```
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Agents execute mols/wisps by:
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1. Reading the pinned work from their hook
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2. Completing steps in dependency order
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3. Closing steps as they finish
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4. Exiting when all steps complete
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**Running is where cognition happens** - agents provide judgment, code, decisions.
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## The Two Composition Operators
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### Rig (Source-Level)
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Operates on **formulas** (YAML source files).
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```
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Formula + Formula ──rig──→ Compound Formula
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```
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Use rigging when:
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- You're authoring new workflows
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- You want version-controlled composition
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- You need the full algebra (extends, aspects, macros)
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### Bond (Artifact-Level)
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Operates on **artifacts** (protos, mols, wisps).
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```
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Artifact + Artifact ──bond──→ Combined Artifact
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```
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**The Bond Table** (symmetric, complete):
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| bond | Proto | Mol | Wisp |
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|------|-------|-----|------|
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| **Proto** | Compound Proto | Spawn Mol, attach | Spawn Wisp, attach |
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| **Mol** | Spawn Mol, attach | Link via edges | Link via edges |
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| **Wisp** | Spawn Wisp, attach | Link via edges | Link via edges |
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Use bonding when:
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- Runtime dynamic composition (patrol discovers issue → bond bug mol)
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- Ad-hoc combination without writing YAML
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- Combining Mol Mall artifacts without source
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- Programmatic proto generation
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## The Complete Picture
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```
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SOURCE LEVEL
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════════════
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Formula ─────rig─────→ Compound Formula
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│ │
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│ │
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└──────────┬─────────────┘
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│
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cook
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│
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▼
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ARTIFACT LEVEL
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══════════════
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Proto ──────bond─────→ Compound Proto
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│ \ │ \
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│ \ │ \
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pour wisp pour wisp
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│ \ │ \
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▼ ▼ ▼ ▼
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Mol Wisp ───bond───→ Linked Work
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│ │
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└───┬───┘
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│
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run
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│
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▼
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EXECUTION
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═════════
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Steps complete
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Work gets done
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Digests created
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```
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## Vocabulary Summary
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| Term | Meaning | Example |
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|------|---------|---------|
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| **Formula** | Source YAML with composition rules | `shiny.formula.yaml` |
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| **Rig** | Compose formulas (source level) | `extends: shiny` |
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| **Cook** | Transform formula → proto | `bd cook shiny` |
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| **Proto** | Frozen workflow template | Cooked, immutable structure |
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| **Pour** | Instantiate as mol (liquid) | `bd pour shiny` |
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| **Wisp** | Instantiate as wisp (vapor) | `bd wisp shiny` |
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| **Mol** | Flowing persistent work | Tracked in `.beads/` |
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| **Wisp** | Ephemeral transient work | Tracked in `.beads-wisp/` |
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| **Bond** | Combine artifacts (any level) | `bd bond proto-a proto-b` |
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| **Sling** | Cook + assign to agent hook | `gt sling shiny polecat/alpha` |
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| **Run** | Execute mol/wisp steps | Agent follows molecule |
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## The Metaphor Sources
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| Concept | Breaking Bad | Mad Max |
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|---------|--------------|---------|
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| Formula | Secret recipe | Fuel formula |
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| Rig | Lab setup | War Rig assembly |
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| Cook | "Let's cook" | Refining guzzoline |
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| Proto | 99.1% pure crystal | Refined fuel |
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| Pour/Wisp | Distribution | Pumping/vapor |
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| Mol/Wisp | Product in use | Fuel burning |
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| Bond | Cutting/mixing | Fuel blending |
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| Sling | Dealing | Fuel dispatch |
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| Run | The high | The chase |
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## Why This Matters
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1. **Clean separation**: Source composition (rig) vs artifact composition (bond)
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2. **Symmetric operations**: Bond table is complete, no holes
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3. **Clear phases**: Rig → Cook → Run, each with distinct purpose
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4. **Metaphor coherence**: Breaking Bad + Mad Max vocabulary throughout
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5. **Implementation clarity**: Each phase maps to specific commands
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> **This document has been consolidated into [molecular-chemistry.md](molecular-chemistry.md).**
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>
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> See the following sections:
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> - [The Work Lifecycle: Rig → Cook → Run](molecular-chemistry.md#the-work-lifecycle-rig--cook--run)
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> - [The Complete Artifact Graph](molecular-chemistry.md#the-complete-artifact-graph)
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> - [Two Composition Operators](molecular-chemistry.md#two-composition-operators)
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> - [Formulas: The Source Layer](molecular-chemistry.md#formulas-the-source-layer)
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> - [The Polymorphic Bond Operator](molecular-chemistry.md#the-polymorphic-bond-operator)
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---
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*This is a discovery, not an invention. The structure was always there.*
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*Consolidated: 2025-12-23*
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