feat(daemon): add lifecycle support for refinery and crew

- Add refinery and crew patterns to identityToSession()
- Add refinery and crew handling to restartSession() with pre-sync
- Add refinery and crew to identityToStateFile()
- Fix gt refinery start to send gt prime after Claude starts
- New syncWorkspace() helper for agents with persistent clones

internal/refinery/manager.go

@@ -209,7 +209,6 @@ func (m *Manager) Start(foreground bool) error {
 	}
 
 	// Start Claude agent with full permissions (like polecats)
-	// The agent will run gt prime to load refinery context and start processing
 	command := "claude --dangerously-skip-permissions"
 	if err := t.SendKeys(sessionID, command); err != nil {
 		// Clean up the session on failure
@@ -217,6 +216,12 @@ func (m *Manager) Start(foreground bool) error {
 		return fmt.Errorf("starting Claude agent: %w", err)
 	}
 
+	// Prime the agent after Claude starts to load refinery context
+	if err := t.SendKeysDelayed(sessionID, "gt prime", 2000); err != nil {
+		// Warning only - don't fail startup
+		fmt.Printf("Warning: could not send prime command: %v\n", err)
+	}
+
 	return nil
 }