Update mol-sync-workspace generate-report step to distinguish:
- Feature branches: 'Commits ahead of main: N'
- Crew on main: 'Unpushed commits: N'
The 'commits ahead of main' was confusing for crew workers who work
directly on main branch. 'Unpushed commits' is clearer for that case.
Also added explicit git commands for checking divergence.
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
The monolithic handle-dirty-state step handled three distinct concerns.
Split into focused steps for clarity and maintainability:
1. handle-uncommitted: Handle staged/unstaged changes
- Commit if ready (WIP)
- Stash if experimental/incomplete
2. handle-untracked: Handle untracked files
- Decision matrix by file type
- Actions: gitignore, commit, or delete
- Warns against auto-delete
3. handle-stashes: Review and clean stash entries
- Age-based decision matrix
- Drop stale entries (>1 week old)
- Caution about index shifting
Updated cleanup-worktrees to depend on handle-stashes.
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Reordered mol-sync-workspace.formula.toml so cleanup-worktrees runs after
handle-dirty-state instead of after run-tests. This is more logical:
worktree cleanup is housekeeping that should happen during workspace prep,
not after verification steps.
New execution order:
1. assess-state
2. handle-dirty-state
3. cleanup-worktrees ← moved here
4. sync-git
5. sync-beads → run-doctor → verify-build → run-tests
6. generate-report → signal-ready
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Expanded the sync-git step in mol-sync-workspace.formula.toml with detailed
guidance for Refinery agents on how to handle merge conflicts inline:
- Trivial conflicts: resolve immediately (imports, whitespace, etc.)
- Semantic conflicts: assess carefully before merging
- Complex conflicts: abort and notify polecat to rebase
- Judgment call principle: when in doubt, abort rather than risk broken main
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Adds explicit priming commands at the start of workspace assessment:
- gt prime: Load gt/mol context
- bd prime: Load beads context
Critical for fresh sessions, post-compaction, or context clear scenarios.
Also updates exit criteria to reflect priming requirement.
(gt-0xhuz)
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add configurable build_command and test_command variables to the
mol-sync-workspace formula. Previously hardcoded to Go commands,
now supports any project type via variable configuration.
- Add build_command variable (default: go build ./...)
- Add test_command variable (default: go test ./...)
- Update verify-build step to use {{ build_command }}
- Update run-tests step to use {{ test_command }}
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Molecule for coordinated workspace sync across agents:
- Git pull/rebase with conflict preservation
- Beads sync and doctor check
- Build/test verification
- Worktree cleanup
- Readiness reporting
Designed for broadcast to all agents before batch assignments.
