Check Witness and Refinery health

Check Witness and Refinery health for each rig.

**ZFC Principle**: You (Claude) make the judgment call about what is "stuck" or "unresponsive" - there are no hardcoded thresholds in Go. Read the signals, consider context, and decide.

For each rig, run:
```bash
gt witness status <rig>
gt refinery status <rig>
```

**Signals to assess:**

| Component | Healthy Signals | Concerning Signals |
|-----------|-----------------|-------------------|
| Witness | State: running, recent activity | State: not running, no heartbeat |
| Refinery | State: running, queue processing | Queue stuck, merge failures |

**Tracking unresponsive cycles:**

Maintain in your patrol state (persisted across cycles):
```
health_state:
  <rig>:
    witness:
      unresponsive_cycles: 0
      last_seen_healthy: <timestamp>
    refinery:
      unresponsive_cycles: 0
      last_seen_healthy: <timestamp>
```

**Decision matrix** (you decide the thresholds based on context):

| Cycles Unresponsive | Suggested Action |
|---------------------|------------------|
| 1-2 | Note it, check again next cycle |
| 3-4 | Attempt restart: gt witness restart <rig> |
| 5+ | Escalate to Mayor with context |

**Restart commands:**
```bash
gt witness restart <rig>
gt refinery restart <rig>
```

**Escalation:**
```bash
gt mail send mayor/ -s "Health: <rig> <component> unresponsive" \
  -m "Component has been unresponsive for N cycles. Restart attempts failed.
      Last healthy: <timestamp>
      Error signals: <details>"
```

Reset unresponsive_cycles to 0 when component responds normally.


Engineer main loop: poll for ready merge-requests

Implement the Engineer's main processing loop.

Loop structure:
1. Query: bd ready --type=merge-request
2. If empty: sleep(poll_interval), continue
3. Select highest priority, oldest MR
4. Claim: bd update <id> --status=in_progress
5. Process (delegate to other subtasks)
6. Repeat

Configuration:
- poll_interval: from rig config (default 30s)
- max_concurrent: from rig config (default 1)

The loop should be interruptible and handle graceful shutdown.

Reference: docs/merge-queue-design.md#engineer-processing-loop


Test molecule

Test


Design: Deacon exponential backoff when town is idle

## Problem

When the user goes to sleep and all workers have stopped, the Deacon continues
polling at full speed (every daemon heartbeat). This wastes resources and creates
unnecessary log noise.

## Requirements

1. **Gradual slowdown**: Deacon patrol frequency should exponentially back off
   when there's no activity in the town.

2. **Wake on activity**: Any gt or bd command (human or agent) should reset
   the backoff immediately.

3. **Daemon coordination**: Deacon needs to "program" the daemon for next
   heartbeat duration.

## Design Considerations

### Option A: Daemon tracks last-activity timestamp
- Daemon mechanically slows heartbeat based on time since last activity
- Activity signal comes from gt/bd command hooks
- Simple, no Deacon state needed
- But: Daemon is "dumb" by design - adding intelligence here feels wrong

### Option B: Deacon tracks patrol-count-since-activity
- Deacon maintains counter (via label on patrol molecule or state.json)
- Each idle patrol increments counter, calculates next sleep
- Deacon tells daemon "wake me in X minutes"
- More complex but keeps intelligence in AI agent

### Option C: Discovery-based (preferred if feasible)
- Can we detect "no activity" without explicit counters?
- Ideas:
  - Compare current time to last git commit across all clones?
  - Check tmux activity timestamps?
  - Look at beads modification times?
- Pros: No state to manage
- Cons: May be expensive to compute, could miss activity

### Wake mechanism
- Hook on gt commands (gt.hooks.pre-command or similar)
- Hook on bd commands (bd.hooks.pre-command)
- Both should signal daemon (SIGUSR2?) or write to activity file
- Daemon reads activity file on each heartbeat, resets backoff if fresh

### Backoff schedule (strawman)
| Idle patrols | Next heartbeat |
|--------------|----------------|
| 0-5          | 5 min (default) |
| 6-10         | 10 min |
| 11-20        | 30 min |
| 21+          | 60 min (max) |

## Open Questions

1. Should tmux activity count as "activity"? (cursor movement, typing)
2. How does Deacon communicate next-heartbeat to daemon?
3. Where to store backoff state? (daemon state.json? deacon state.json? label?)
4. Should wake be instant (SIGUSR) or next-heartbeat?

## Implementation Sketch

Activity file written by hooks at ~/gt/daemon/activity.json:
- last_command: timestamp
- command: the gt/bd command that ran
- actor: who ran it


Digest: mol-deacon-patrol

Patrol cycle 15: routine


Day 1.6: Update gt mol status to use hook slot

Migrate gt mol status from:
- Query(status=pinned AND assignee=me)
To:
- Read agent bead → check hook_bead field

This eliminates hook ambiguity.

Parent: gt-d0jqp


Add pre-flight test check to mol-polecat-work

Add a step early in mol-polecat-work (after branch-setup, before implement) to check if tests pass on main.

## Problem
If main is broken when polecat starts, they could:
- Waste context trying to fix unrelated issues
- Not know if their changes broke things or it was pre-existing
- Get blamed for failures they didn't cause

## Proposed Step: preflight-tests

After branch-setup, before implement:

1. Checkout main temporarily
2. Run test suite
3. If tests PASS: Continue to implement
4. If tests FAIL:
   - Quick fix (<15 min): Fix it, commit to main, then continue
   - Big fix: File bead, mail Witness, proceed with own work
   - Use ZFC judgment - you're there, you decide

## Handoff Consideration
If fixing pre-existing failures consumes significant context:
- Commit the fix
- gt handoff with note: 'Fixed pre-existing test failures, continuing with assigned work'
- Fresh session picks up from implement step

## Key Principle
Scotty Test: Don't walk past a broken warp core. But also don't let someone else's mess derail your mission entirely.


Epic: Wisp Molecule Integration

## Vision

Integrate Beads wisp molecules into Gas Town. All orchestration work runs as wisp molecules - patrols, polecat workflows, batch operations. Only digests reach main beads.

## The Steam Engine Metaphor

```
Engine does work → generates steam
Steam wisps rise → execution trace
Steam condenses → digest (distillate)
Steam dissipates → cleaned up (burned)
```

## Architecture

```
Proto Molecules (templates)
    ↓ bd mol bond
Wisps (.beads-wisps/ or inline)
    ↓ bd mol squash + AI summary
Main Beads (digests only)
```

## Vocabulary

| Term | Meaning |
|------|---------|
| bond | Attach proto to work (creates wisps) |
| wisp | Temporary execution step (steam rising) |
| squash | Condense wisps into digest |
| burn | Destroy wisps without record |
| digest | Permanent condensed record (distillate) |

## Key Design Decisions

1. **Wisp location**: Per-rig or inline in main beads with wisp flag
2. **Summary generation**: Agent that did work generates summary (inversion of control)
3. **Squash timing**: Final step of molecule workflow, before signaling done
4. **Crash recovery**: Wisps persist, Witness detects stalls, new agent resumes
5. **Patrols**: Each cycle is fresh wisp molecule, squashed on completion

## Digest Contents

- Molecule type and instance ID
- Assignee, start/end times
- Source issue reference
- AI-generated summary
- Outcomes (issues closed, commits, branches)

## Integration Points

- gt rig init: Configure wisp storage
- gt spawn --molecule: Bond creates wisps
- gt prime: Show wisp molecule context
- Polecat CLAUDE.md: Summary + squash protocol
- gt doctor: Wisp health checks
- Deacon/Witness/Refinery: Patrol molecules

## Phases

Phase 1: Wisp setup infrastructure
Phase 2: Spawn integration
Phase 3: Completion flow (summary + squash)
Phase 4: Patrol integration
Phase 5: Documentation and polish


Digest: mol-deacon-patrol

Patrol 2: routine, all healthy


Swarm beads naming convention and auto-filing

Beads naming convention for swarm lifecycle events.

## Bead IDs

- swarm-started:<swarm-id>     # Filed when swarm begins
- swarm-task-merged:<swarm-id>:<task-id>  # Filed per task merge
- swarm-landed:<swarm-id>      # Filed when merged to main
- swarm-failed:<swarm-id>      # Filed on unrecoverable failure

## swarm-started Bead

Filed by: Mayor/Refinery at swarm creation
Contains:
- Swarm title and description
- List of tasks (issue IDs)
- List of workers (polecat names)
- Base commit SHA

## swarm-task-merged Bead

Filed by: Refinery after each successful merge
Contains:
- Task issue ID and title
- Polecat name
- Merge commit SHA
- Test results summary

## swarm-landed Bead

Filed by: Refinery after landing to main
Contains:
- Final merge commit SHA
- Stats: tasks completed, time taken
- List of all merged task beads
- Integration branch name (now deleted)

## swarm-failed Bead

Filed by: Refinery on unrecoverable failure
Contains:
- Failure reason
- Tasks merged vs not merged
- Recovery guidance

## Why Beads (not just mail)

- Persistent, queryable, synced to git
- Other agents can check status without mail
- Creates audit trail
- Works when agents offline


Digest: mol-deacon-patrol

Patrol 2: Quick scan, all healthy, no work


Digest: mol-deacon-patrol

Patrol 20: Final patrol, handing off


Digest: mol-deacon-patrol

Patrol 12: all clear


Digest: mol-deacon-patrol


Swarm: ephemeral rig support

PGT has ephemeral rigs for swarms - temporary worker groups that are destroyed after landing.

Missing Features:
- gt swarm init [--rig <name>|--git-url <url>] [--num-workers N]
- gt swarm worker add/remove/list <rig-id>
- gt swarm rigs - List ephemeral rigs
- gt swarm destroy <rig-id> - Destroy ephemeral rig

Directory structure:
<workspace>/mayor/workers/<rig-id>/
├── rig.json (metadata)
├── alice/ (git clone)
├── bob/
└── carol/

PGT Reference: gastown-py/src/gastown/ephemeral.py

Note: Beads issue gt-kmn.12 mentions this but implementation is missing.


Digest: mol-deacon-patrol

Patrol 13: Quick cycle, all quiet


Refactor formula transformation pipeline to shared helper

The formula transformation pipeline (control flow, advice, expansions, aspects) is duplicated between cook.go and mol_bond.go. Should be extracted to a shared function in the formula package.

Current duplication in:
- cmd/bd/cook.go:96-136
- cmd/bd/mol_bond.go:598-633

Suggested approach:
- Add formula.Transform(resolved *Formula, parser *Parser) (*Formula, error)
- Handles all transformation steps in order
- Both cook.go and mol_bond.go call this single function


Analysis: Beads database size and hygiene strategy

Audit beads database size and plan medium-term hygiene.

## Questions
1. How many issues total (including tombstones)?
2. Size of issues.jsonl?
3. Growth rate per day/week?
4. What percentage are tombstones?

## Hygiene Topics
- Compaction: squash tombstones periodically
- Archival: move old closed issues to archive file
- Pruning: delete truly stale items (test beads, old MRs)
- Sync efficiency: large JSONL = slow sync

## Action Items
- [ ] Count total issues by status
- [ ] Count tombstones
- [ ] Measure file sizes
- [ ] Propose hygiene schedule


Witness role template + CLAUDE.md

Create the Witness agent's role context:

1. internal/templates/roles/witness.md.tmpl
   - Witness responsibilities (polecat lifecycle)
   - Core loop description
   - Commands available (gt polecats, bd ready, etc)
   - Escalation protocol

2. Generate CLAUDE.md for witness/ directories
   - Context about the rig
   - Mail address: <rig>/witness
   - Startup protocol (gt prime, check inbox)

The Witness is the per-rig 'pit boss' - NOT a global coordinator. It manages polecats for ONE rig only.


Digest: mol-deacon-patrol @ 2025-12-24 19:22

Patrol 5: all healthy, 2 crews (dave, max) active


Add unit tests for internal/mail router and mailbox

attached_args: Add unit tests for mail router and mailbox

Add tests for mail routing and mailbox functionality.

## Files to create
- internal/mail/router_test.go
- internal/mail/mailbox_test.go

## Test cases for router
1. Route() resolves addresses correctly
2. Route() handles rig/role format
3. Route() handles rig/crew/name format
4. Invalid addresses return error

## Test cases for mailbox
1. Send() writes message to mailbox
2. Inbox() lists messages
3. Read() retrieves message by ID
4. Delete() removes message
5. Messages persist correctly

## Acceptance criteria
- [ ] router_test.go with 4+ tests
- [ ] mailbox_test.go with 5+ tests
- [ ] Tests pass: go test ./internal/mail/...
- [ ] Coverage > 60%


Machine registry: Store and manage machine configs

Registry for managing remote machines in federation.

## Data Model

```go
type Machine struct {
    Name     string `json:"name"`
    Type     string `json:"type"`      // "local", "ssh", "gcp"
    Host     string `json:"host"`      // for ssh: user@host
    KeyPath  string `json:"key_path"`  // SSH key path
    TownPath string `json:"town_path"` // Path to town on remote
}
```

## Interface

```go
type MachineRegistry struct {
    path     string  // config/federation.json
    machines map[string]*Machine
}

func NewMachineRegistry(configPath string) *MachineRegistry
func (r *MachineRegistry) Get(name string) (*Machine, error)
func (r *MachineRegistry) Add(m *Machine) error
func (r *MachineRegistry) Remove(name string) error
func (r *MachineRegistry) List() []*Machine
func (r *MachineRegistry) Connection(name string) (Connection, error)
```

## Storage

federation.json in config/:
```json
{
  "version": 1,
  "machines": {
    "local": {"type": "local"},
    "gcp-vm-1": {
      "type": "ssh",
      "host": "user@10.0.0.1",
      "key_path": "~/.ssh/gcp_key",
      "town_path": "/home/user/ai"
    }
  }
}
```

## Connection Factory

```go
func (r *MachineRegistry) Connection(name string) (Connection, error) {
    m := r.machines[name]
    switch m.Type {
    case "local":
        return NewLocalConnection(), nil
    case "ssh":
        return NewSSHConnection(m.Host, m.KeyPath), nil
    }
}
```


Digest: mol-deacon-patrol

Patrol 12: All agents healthy


Digest: mol-deacon-patrol

Patrol 11: routine


attached_args: Extract processExists function to reduce duplication

Extract duplicated processExists function to shared package.

## Files to modify
- internal/util/process.go (NEW)
- internal/witness/manager.go (remove local function, import util)
- internal/refinery/manager.go (remove local function, import util)

## Current duplication
Both files have identical implementations at:
- internal/witness/manager.go (lines 136-144)
- internal/refinery/manager.go (lines 646-654)

```go
func processExists(pid int) bool {
    proc, err := os.FindProcess(pid)
    if err != nil {
        return false
    }
    err = proc.Signal(nil)
    return err == nil
}
```

## Implementation
Create internal/util/process.go:
```go
package util

import "os"

// ProcessExists checks if a process with the given PID exists.
func ProcessExists(pid int) bool {
    proc, err := os.FindProcess(pid)
    if err != nil {
        return false
    }
    return proc.Signal(nil) == nil
}
```

## Acceptance criteria
- [ ] internal/util/process.go created with ProcessExists function
- [ ] internal/util/process_test.go with basic tests
- [ ] witness/manager.go imports util and uses util.ProcessExists
- [ ] refinery/manager.go imports util and uses util.ProcessExists
- [ ] Local processExists functions removed from both files
- [ ] go build ./... passes
- [ ] go test ./... passes


Build context self-check into patrol molecules

Patrol molecules (witness-patrol, refinery-patrol, deacon-patrol) should have
explicit context self-check as part of each cycle:

After each patrol cycle step:
- Self-assess context pressure
- If high: complete current step, then initiate handoff
- If OK: continue to next cycle

This could be:
1. Explicit step in molecule: 'context-check'
2. Guidance in step instructions: 'Before continuing, assess context...'
3. Protocol baked into the patrol loop description

The key is making it unavoidable - not optional guidance that gets ignored.


Prompt templates: role contexts, nudge messages

Prompt templates for role contexts and messages.

## Template Types

### Role CLAUDE.md Templates

For gt prime and CLAUDE.md generation:
- Mayor template
- Witness template
- Refinery template
- Polecat template

### Message Templates

For notifications and nudges:
- Spawn assignment
- Witness nudge
- Escalation to Mayor
- Session handoff

## Implementation

```go
//go:embed templates/*.md.tmpl
var templateFS embed.FS

type Templates struct {
    fs embed.FS
}

func NewTemplates() *Templates
func (t *Templates) RenderRole(role string, data RoleData) (string, error)
func (t *Templates) RenderMessage(name string, data any) (string, error)
```

## Template Data

```go
type RoleData struct {
    Role      string
    RigName   string
    TownRoot  string
    Polecats  []string
    Commands  []CommandHelp
}

type SpawnData struct {
    Issue       string
    Title       string
    Priority    int
    Description string
}

type NudgeData struct {
    Polecat    string
    Reason     string
    NudgeCount int
    MaxNudges  int
}
```

## Template Location

Embedded in binary via go:embed:
```
internal/templates/
├── roles/
│   ├── mayor.md.tmpl
│   ├── witness.md.tmpl
│   ├── refinery.md.tmpl
│   └── polecat.md.tmpl
└── messages/
    ├── spawn.md.tmpl
    ├── nudge.md.tmpl
    └── escalation.md.tmpl
```

## Usage

gt prime uses role templates.
gt spawn uses spawn template.
Witness uses nudge/escalation templates.


load-context

Run gt prime and bd prime. Verify issue assignment.
Check inbox for any relevant messages.

Read the assigned issue (gt-test) and understand the requirements.
Identify any blockers or missing information.


Day 1.4b: Create Deacon agent bead

Create gt-deacon agent bead for the Deacon (daemon beacon).

The Deacon is a separate Claude Code agent from Mayor:
- Receives the ONLY mechanical daemon heartbeats in the system
- Runs town plugins, cleanup, and monitoring
- Has own top-level directory: ~/gt/deacon/
- No rig preassignment (town-level, like Mayor)
- role_type: deacon

Agent bead structure:
```yaml
id: gt-deacon
type: agent
entity_platform: gastown
entity_org: steveyegge
entity_id: deacon
hook_bead: null  # or current patrol wisp
role_bead: gt-deacon-role
state: idle
role_type: deacon
```

Must be created alongside mayor, witness, refinery agent beads.


Digest: mol-deacon-patrol

Patrol 5: Quiet, all healthy


Digest: mol-deacon-patrol

Patrol 8: All healthy


Dynamic arm bonding in witness patrol

Witness survey step uses bd mol bond to attach mol-polecat-arm for each active worker. Variables: worker name, rig. Arms become children of the patrol molecule. Requires on_complete/for_each runtime support.


gt rig shutdown: Gracefully stop all rig agents

Add 'gt rig shutdown <rig>' command to gracefully stop all agents in a rig.

Should:
- Stop all polecat sessions
- Stop refinery
- Stop witness
- Optionally wait for graceful shutdown with timeout


Digest: mol-deacon-patrol

Patrol 5: Quiet


Digest: mol-deacon-patrol

Patrol 4: Routine, all healthy


Witness: Verify MR submission on notification

When Witness receives `LIFECYCLE: mr submitted`, verify the submission was clean.

## Implementation

1. Add handler for "LIFECYCLE: mr submitted" mail
2. Check MR status: `gt mq status <mr-id>`
3. If MR looks good (status=open, no errors): log success, allow polecat to idle
4. If MR has issues:
   - Check polecat git state
   - Nudge polecat to fix if session still alive
   - Log issue for monitoring

## Acceptance
- Witness verifies MR after submission notification
- Can detect problematic submissions
- Provides early intervention opportunity


Validate expanded step IDs are unique


Digest: mol-deacon-patrol

Patrol 19: Quiet


Digest: mol-deacon-patrol

Patrol #14


Digest: mol-deacon-patrol

Patrol 2: all healthy, no incidents


MR state transitions: validate open→in_progress→closed

Enforce valid state transitions for merge-requests:

Valid transitions:
- open → in_progress (Engineer claims MR)
- in_progress → closed (merge success or rejection)
- in_progress → open (failure, reassign to worker)
- open → closed (manual rejection)

Invalid:
- closed → anything (immutable once closed)

Implement validation in MR update operations.

Reference: docs/merge-queue-design.md#state-machine


Merge: gt-cp2s

branch: polecat/rictus
target: main
source_issue: gt-cp2s
rig: gastown


Test Patrol Parent

Test parent for Christmas Ornament pattern


Digest: mol-deacon-patrol @ 2025-12-24 19:28

Patrol 17


Update vision.md with proto/mol/wisp terminology

Update the Steam Engine Metaphor section to use consistent phase terminology:

Current (vision.md):
- Proto molecules = fuel (templates)
- Wisps = steam (transient execution traces)
- Digests = distillate (permanent records)

New terminology:
- **Proto** = crystal/solid - frozen template
- **Mol** = liquid - reified durable instance (tracked in git)
- **Wisp** = gas - ephemeral instance (evaporates after squash)
- **Digest** = distillate - compressed summary after squash

Key clarification needed:
- Proto → bond → creates either Mol (durable) or Wisp (ephemeral)
- The choice of Mol vs Wisp depends on --wisp flag
- Default is Mol (durable, recorded in main beads)
- Wisp lives in .beads-ephemeral/, squashes away


Merge: gt-caih

branch: polecat/furiosa
target: main
source_issue: gt-caih
rig: gastown


Mail coordination should use town-level database

gt mail send/inbox should use ~/gt/.beads (town root) not rig-local beads. Cross-rig mail coordination (Witness <-> Mayor, polecat <-> Witness) needs to be in a shared location.


Digest: mol-deacon-patrol

Patrol 7: all clear


Merge: gt-83k0

branch: polecat/furiosa
target: main
source_issue: gt-83k0
rig: gastown


Swarm cleanup: delete merged polecat branches and reset state

After a swarm completes and branches are merged, leftover state remains:

## Current Problem

1. **Remote branches not deleted** - polecat/* branches stay on origin after merge
2. **Polecat clones not reset** - still on old branch with completed work
3. **No cleanup command** - manual cleanup required

## Observed After Swarm

Remote branches still present:
- origin/polecat/Morsov
- origin/polecat/Nux
- origin/polecat/Rictus
- origin/polecat/Slit
- origin/polecat/Toast

## Proposed Solution

Add cleanup commands:

1. gt swarm cleanup <swarm-id> - Clean up after swarm completion
   - Delete remote polecat branches that were merged
   - Reset polecat clones to main
   - Clear issue assignments

2. gt polecat reset <rig>/<polecat> - Reset single polecat
   - git checkout main && git pull
   - Delete local polecat branch
   - Clear current issue assignment

3. Auto-cleanup option on gt session stop --cleanup

## Manual Cleanup For Now

git push origin --delete polecat/Nux polecat/Toast ...
cd polecats/Nux && git checkout main && git pull


Review: Witness patrol template changes (gt-h1n5)

Polecat rictus implemented significant witness.md.tmpl changes: banners, wisp-based execution, handoff bead attachment, loop-or-exit, patrol summary. Review for correctness and consistency with deacon pattern.


Digest: mol-deacon-patrol

Patrol 1: No callbacks, no gates, all agents healthy, cleaned 2 orphan processes + 1 stale lock


Daemon: verify requesting_cycle before kill

Per gt-gby spec, daemon should verify agent state shows requesting_cycle=true before killing session. Currently kills on any lifecycle request without verification.

Requires state.json in agent workspace with requesting_cycle field.


Digest: mol-deacon-patrol

Patrol 10: All healthy, 1 in_progress issue (max working)


Session management: start, stop, attach, capture

Polecat session lifecycle management.

## Interface

```go
type SessionManager struct {
    tmux *Tmux
    rig  *Rig
}

func NewSessionManager(tmux *Tmux, rig *Rig) *SessionManager

// Lifecycle
func (sm *SessionManager) Start(polecat string, opts StartOptions) error
func (sm *SessionManager) Stop(polecat string) error
func (sm *SessionManager) IsRunning(polecat string) (bool, error)
func (sm *SessionManager) List() ([]SessionInfo, error)

// Interaction
func (sm *SessionManager) Attach(polecat string) error
func (sm *SessionManager) Capture(polecat string, lines int) (string, error)
func (sm *SessionManager) Inject(polecat string, message string) error

type StartOptions struct {
    WorkDir   string   // defaults to polecat clone dir
    Issue     string   // optional: issue to work on
    Command   string   // optional: override claude command
}

type SessionInfo struct {
    Polecat   string
    SessionID string
    Running   bool
    StartedAt time.Time
}
```

## Session Naming

`gt-<rig>-<polecat>` (e.g., `gt-wyvern-Toast`)

## Start Flow

1. Verify polecat clone exists
2. Check no existing session
3. Create tmux session in polecat workdir
4. Send initial command: `claude` or custom
5. If issue provided, inject initial prompt

## Stop Flow

1. Capture final output (for logging)
2. Send exit/quit command
3. Wait briefly for graceful shutdown
4. Kill session if still running

## Capture

Uses tmux capture-pane to get recent output. Returns last N lines.

## Inject

Sends text to session via tmux send-keys. Used for:
- Mail notifications
- Witness nudges
- User messages


Digest: mol-deacon-patrol

Patrol 6: all healthy


Day 5.1: End-to-end liftoff test

Full integration test:
1. gt sling gt-task123 gastown/nux
2. Watch polecat work (no manual intervention)
3. Watch refinery merge (no manual intervention)
4. Watch witness clean up (no manual intervention)
5. See cycle complete in bd activity or logs

Success = no human touches needed.

Parent: gt-oki8p


Fix patrol role priming

Patrol roles (deacon, witness, refinery) need proper context priming.

Current issue: Sessions start but may not have proper CLAUDE.md context.

Fix:
1. Ensure role templates include patrol formula reference
2. Verify SessionStart hook runs gt prime
3. Check that patrol loop starts automatically

Related: Role templates in internal/templates/roles/*.md.tmpl


Merge: gt-rana.4

branch: polecat/ace
target: main
source_issue: gt-rana.4
rig: gastown


Digest: mol-deacon-patrol

P18: stable


Digest: mol-deacon-patrol

Patrol 2: All healthy, no events


Merge: nux-1766959759345

branch: polecat/nux-1766959759345
target: main
source_issue: nux-1766959759345
rig: gastown


142 instances of error suppression with _ = pattern

Code has 142 instances of '_ = ' error suppression in non-test code.
Examples:
- internal/polecat/manager.go: _ = pool.Load() - ignores state loading
- internal/daemon/notification.go: _ = os.WriteFile() - ignores file write
- internal/mail/router.go: _ = r.notifyRecipient() - notification ignored

These create silent failures and hard-to-debug issues.

Options:
1. Document intentional suppressions with comments
2. Handle errors properly where appropriate
3. At minimum, log suppressed errors at debug level


Digest: mol-deacon-patrol

Patrol 20: all healthy, new polecats spawning


Digest: mol-deacon-patrol

Patrol 6: Quick cycle, all quiet


Add bulk polecat remove command (gt polecat remove --all)

When decommissioning a rig, need to remove multiple polecats one at a time. A --all or --rig flag would allow: gt polecat remove --rig gastown --force


Digest: mol-deacon-patrol

Patrol 19: All healthy


Comprehensive help text and examples

Improve help text with examples and cross-references.

## Improvements

### 1. Examples Section
Add to Long description:
```go
var spawnCmd = &cobra.Command{
    Long: `Spawn a polecat with work assignment.

Examples:
  gt spawn gastown/Toast --issue gt-abc
  gt spawn gastown --issue gt-def          # auto-select polecat
  gt spawn gastown/Nux -m "Fix the tests"  # free-form task`,
}
```

### 2. Cross-References
Reference related commands:
```
See also:
  gt polecat list    List available polecats
  gt session attach  Attach to spawned session
```

### 3. Flag Descriptions
More detail on flags:
```go
cmd.Flags().StringVar(&issue, "issue", "",
    "Beads issue ID to assign. The polecat will work on this issue.")
```

### 4. Common Workflows
Add workflow docs to gt --help:
```
Common Workflows:
  Start a swarm:
    gt swarm preflight
    gt swarm create gastown --epic gt-abc --worker Toast --worker Nux --start
    gt refinery start gastown

  Check status:
    gt status
    gt swarm status <id>
```

## Files to Update
All internal/cmd/*.go files

## Acceptance Criteria
- [ ] All commands have Examples
- [ ] Related commands cross-referenced
- [ ] Flags have detailed descriptions
- [ ] Root help shows workflows


Digest: mol-deacon-patrol

Patrol OK: 0 polecats, 6 core sessions up, town quiet


Digest: mol-deacon-patrol

P15: stable


Schematic: Domain-Level Formula Composition

A Schematic is a coordinated set of formulas defining an entire workflow domain.

## Concept

Like an orchestra score to instrument parts - says how formulas fit together.

```toml
# shiny-engineering.schematic
[schematic]
name = "The Shiny Way"
description = "Full engineering workflow from issue to production"

[formulas]
planning = "@gastown/shiny"
development = "@gastown/polecat-work"
review = "@gastown/review"
release = "@gastown/release"

[flow]
default = "planning >> development >> review >> release"

[constraints]
all_code_reviewed = true
tests_before_deploy = true
```

## Relationship to Other Concepts

- **Schematic** (workflow dimension) = composition of Formulas
- **Campaign** (work dimension) = composition of Epics
- Schematic compiles to Campaign, like Formula compiles to Molecule

## Use Cases

1. Define "The Shiny Way" for a team/org
2. Encode compliance requirements
3. Standardize workflows across projects
4. Enable workflow reuse and sharing

## Open Questions

1. File format - TOML? YAML? Extend formula syntax?
2. Validation - how to verify schematic consistency?
3. Overrides - can project override org schematic?

## Related

- docs/formula_evolution.md
- gt-8tmz - molecule algebra


Task D: Integration


gt molecule seed: create built-in molecules as beads

The molecule infrastructure is complete but built-in molecules (engineer-in-box, quick-fix, research) need to be seeded into the beads database.

## Current State
- `gt molecule list` works but shows 0 molecules
- BuiltinMolecules() in internal/beads/builtin_molecules.go has 3 molecules defined
- No way to create them as beads

## Needed
Add `gt molecule seed` command that:
1. Reads BuiltinMolecules()
2. Creates each as a bead with type: molecule
3. Uses well-known IDs (mol-engineer-in-box, mol-quick-fix, mol-research)
4. Idempotent (skip if already exists)

## Acceptance Criteria
```
gt molecule seed
gt molecule list   # Shows 3 built-in molecules
```

## Parent
gt-4nn: Molecules epic


Swarm learning: Refinery merge queue automation

Manually merging 15 polecat branches was painful and error-prone. Refinery should automate: detect completed work, run tests, merge to main, handle conflicts. This is core Refinery value prop.


Add mutex to swarm.Manager for thread safety

attached_args: Add swarm.Manager mutex for thread safety

Fix potential race condition in swarm manager's map access.

## Files to modify
- internal/swarm/manager.go
- internal/swarm/manager_test.go (add concurrency test)

## Problem
The swarms map[string]*Swarm is accessed without synchronization:
```go
type Manager struct {
    swarms map[string]*Swarm  // No mutex protection
}
```

Multiple goroutines could call Create(), GetSwarm(), etc. simultaneously.

## Implementation
```go
type Manager struct {
    mu     sync.RWMutex
    swarms map[string]*Swarm
}

func (m *Manager) GetSwarm(id string) *Swarm {
    m.mu.RLock()
    defer m.mu.RUnlock()
    return m.swarms[id]
}
```

## Acceptance criteria
- [ ] sync.RWMutex added to Manager struct
- [ ] All map accesses protected by mutex
- [ ] RLock for reads, Lock for writes
- [ ] Concurrency test added
- [ ] go test -race ./internal/swarm/... passes


Digest: mol-deacon-patrol

Patrol 17: all clear


Molecule execution support for polecats and crew

Enable agents to run bonded molecules through the full lifecycle.

## The Model
1. BOND - bd mol bond <template> --assignee <identity>
   Creates concrete issues, assigns root to agent

2. DISCOVER - Agent finds assigned molecules via bd ready
   DAG structure shows unblocked steps

3. WORK - Agent works through DAG, closing steps as done
   Can delegate children to lower-tier agents (haiku)

4. SURVIVE - Agent dies → beads persist
   Any agent resumes from DAG state

5. SUPERVISE - Witness monitors for stalled molecules
   Nudges owner or reassigns if dead

## Questions to Resolve
- Seed node terminology: seed vs root vs pole vs nucleus
- Assignee inheritance: single owner vs delegation model
- Stall detection: heartbeat vs activity timeout vs session monitoring

## Implementation
- Polecat startup: check for assigned molecules
- Polecat work loop: follow molecule DAG
- Witness: monitor molecule progress, detect stalls
- Mayor: can assign molecules, handle escalations

## Depends On
- beads: bd mol bond command (bd-usro in beads repo)


mol-deacon-patrol minimal formula

Create minimal mol-deacon-patrol formula for tracer bullet.

## Simplified Patrol (v0.1)

```yaml
formula: mol-deacon-patrol-v01
description: Minimal Deacon patrol for tracer bullet.
version: 1

steps:
  - id: inbox-check
    title: Check inbox
    description: |
      Run: gt mail inbox
      Handle any messages.
      Note any spawn requests or status updates.

  - id: spawn-work
    title: Spawn polecat for ready work
    needs: [inbox-check]
    description: |
      Run: bd ready
      If work available and no polecat already working it:
        gt spawn --issue <first-ready> --rig gastown
      If no work: proceed to next step.

  - id: self-inspect
    title: Assess context and decide loop vs cycle
    needs: [spawn-work]
    description: |
      Evaluate whether to loop (reset) or cycle (handoff).

      ## Heuristics

      **Favor LOOP (bd mol reset):**
      - Context < 60%
      - No errors in this cycle
      - Patrol completed normally

      **Favor CYCLE (gt handoff):**
      - Context > 80%
      - Errors encountered
      - Been running > 1 hour without cycle
      - Model suggests refresh would help

      **Action:**
      - If LOOP: bd mol reset mol-deacon-patrol
      - If CYCLE: gt handoff -s "Deacon cycling" -m "Context: X%, cycles: N"
```

## Loop via Reset

After self-inspect, if staying:
```bash
bd mol reset mol-deacon-patrol
```

This resets all steps to pending, current_step to inbox-check.
Deacon immediately continues with fresh patrol cycle.

## Cycle via Handoff

If context high or refresh needed:
```bash
gt handoff -s "Deacon cycling" -m "Context high, cycling for fresh start"
```

Daemon respawns fresh Deacon with mol-deacon-patrol on hook.

## Location

.beads/formulas/mol-deacon-patrol-v01.formula.yaml


Digest: mol-deacon-patrol @ 2025-12-24 19:25

Patrol 10: quiet


Handle callbacks from agents

Handle callbacks from agents.

Check the Mayor's inbox for messages from:
- Witnesses reporting polecat status
- Refineries reporting merge results
- Polecats requesting help or escalation
- External triggers (webhooks, timers)

```bash
gt mail inbox
# For each message:
gt mail read <id>
# Handle based on message type
```

Callbacks may spawn new polecats, update issue state, or trigger other actions.


Digest: mol-deacon-patrol

Patrol 18: quiet


Test gate for verification


Digest: mol-deacon-patrol

Patrol 20: All agents healthy - triggering handoff


gt crew list: List crew workspaces

Implement 'gt crew list [--rig <rig>]' command:
- List all crew workers in rig(s)
- Show status (session running, last activity)
- Show current branch and git status summary
- Support --json output


gt feed: Activity feed command with tmux-aware modes

## Context

`bd activity` exists and works well for streaming beads mutation events. However:
- It's not discoverable via `gt` (the agent coordination CLI)
- No tmux-aware behavior for when Gas Town is running in tmux
- The planned TUI (gt-rivr) was tombstoned - need a simpler approach

## Requirements

### Without tmux (standalone mode)
- `gt feed` streams activity to stdout (like `bd activity --follow`)
- Supports filtering by rig, time window, event type
- Works in any terminal

### With tmux (integrated mode)
- Could open/attach to a dedicated activity pane
- Or provide a way to send feed to a specific pane
- Integrate with existing gt tmux session management

## Design Questions

1. **Command name**: `gt feed` vs `gt activity` vs `gt watch`?
2. **Tmux integration**: Dedicated pane? Split? Popup?
3. **Cross-rig aggregation**: Merge events from multiple rig daemons?
4. **Filtering UX**: By rig, by molecule, by event type?

## Implementation Options

**Phase 1: Simple wrapper**
- `gt feed` shells out to `bd activity --follow`
- Add `--rig` flag for filtering
- Works identically with/without tmux

**Phase 2: Tmux-aware**
- Detect if running in gt tmux session
- Offer to open in dedicated pane
- `gt feed --pane` to force pane mode

**Phase 3: Cross-rig** (if needed)
- Aggregate from multiple rig daemons
- Unified activity stream across town

## Related

- gt-rivr (tombstoned) - Original TUI epic
- gt-22ng - Activity aggregator (blocked)
- bd activity command - The underlying implementation


Patrol lifecycle integration test

Verify patrol runs 3+ cycles without wisp accumulation. bd wisp list should show <5 wisps. Context cycles cleanly produce handoff mail. Test with Deacon patrol.


Digest: mol-deacon-patrol

Patrol cycle 7: routine, healthy


mol-witness-patrol

Per-rig worker monitor patrol loop using the Christmas Ornament pattern.

The Witness is the Pit Boss for your rig. You watch polecats, nudge them toward
completion, verify clean git state before kills, and escalate stuck workers.

**You do NOT do implementation work.** Your job is oversight, not coding.

## The Christmas Ornament Shape

This molecule uses dynamic bonding to create inspection arms per-polecat:

```
                    ★ mol-witness-patrol (trunk)
                   /|\
            ┌─────┘ │ └─────┐
         PREFLIGHT DISCOVERY CLEANUP
            │       │        │
        ┌───┴───┐ ┌─┴─┐  ┌───┴───┐
        │inbox  │ │sur│  │aggreg │
        │refnry │ │vey│  │save   │
        │load   │ └─┬─┘  │summary│
        └───────┘   │    │contxt │
                    │    │loop   │
          ┌─────────┼─────────┐ └───────┘
          │         │         │
          ●         ●         ●     mol-polecat-arm (dynamic)
         ace       nux      toast
          │         │         │
       ┌──┴──┐   ┌──┴──┐   ┌──┴──┐
       │cap  │   │cap  │   │cap  │
       │ass  │   │ass  │   │ass  │
       │dec  │   │dec  │   │dec  │
       │exec │   │exec │   │exec │
       └──┬──┘   └──┬──┘   └──┬──┘
          │         │         │
          └─────────┴─────────┘
                    │
                 ⬣ base (cleanup)
```

## Phases

### PREFLIGHT (fixed steps)
1. inbox-check - Process lifecycle requests, help messages
2. check-refinery - Ensure MQ is alive and processing
3. load-state - Read persistent state (nudge counts, etc.)

### DISCOVERY (spawns dynamic arms)
4. survey-workers - List polecats, bond mol-polecat-arm per polecat
5. run-plugins - Bond mol-plugin-runner for each witness plugin

### CLEANUP (gate + fixed steps)
6. aggregate - GATE: WaitsFor all arms + plugins to complete
7. save-state - Persist nudge counts, action log
8. generate-summary - Create digest content
9. context-check - Check if context is high
10. burn-or-loop - Squash/burn wisp, then loop or exit

## Dynamic Arms

Each polecat gets mol-polecat-arm bonded as a wisp child:
- capture - Capture tmux output
- assess - Categorize state (working/idle/error/done)
- load-history - Get nudge counts for this polecat
- decide - Apply nudge matrix
- execute - Take action (nudge/kill/escalate/none)

Arms run in PARALLEL. The aggregate step waits for all to complete.

## Activity Feed

This design enables real-time visibility:

```
[14:32:08] + patrol-x7k.arm-ace bonded (5 steps)
[14:32:09] → patrol-x7k.arm-ace.capture in_progress
[14:32:10] ✓ patrol-x7k.arm-ace.capture completed
[14:32:14] ✓ patrol-x7k.arm-ace.decide completed (action: nudge-1)
[14:32:17] ✓ patrol-x7k.arm-ace COMPLETE
```

## Storage

- Wisp storage: .beads-wisp/ (ephemeral, gitignored)
- Persistent state: witness handoff bead (nudge counts, etc.)
- Digests: Squashed summaries in permanent beads

## Dependencies

- bd-xo1o: Dynamic Molecule Bonding epic (in beads rig)
  - bd mol bond with variable substitution
  - WaitsFor directive for fanout gates
  - Activity feed query

Labels: [template, christmas-ornament]


Digest: mol-deacon-patrol

P10: stable


Witness Patrol

Per-rig worker monitor patrol loop with progressive nudging.


Implement gt sling command

The unified work dispatch command.

```bash
gt sling <thing> <target> [options]
```

Implements spawn + assign + pin in one operation. See sling-design.md.

Acceptance:
- [ ] Parse thing (proto name, issue ID, epic ID)
- [ ] Parse target (agent address)
- [ ] Spawn molecule if proto
- [ ] Assign to target agent
- [ ] Pin to agent's hook (pinned bead)
- [ ] Support --wisp flag for ephemeral
- [ ] Support --molecule flag for issue+workflow
- [ ] Error if hook already occupied (unless --force)


Digest: mol-deacon-patrol

Patrol 11: OK


Workspace detection: Find() walking up directory tree

Find workspace root by walking up directory tree looking for Gas Town markers.

## Detection Logic

Walk up from current directory, looking for:
1. `config/town.json` - Primary marker (visible config dir per gt-iib)
2. `mayor/` directory at town level - Secondary marker

Stop at filesystem root if neither found.

## Interface

```go
// Find locates the town root from the given directory
func Find(startDir string) (string, error)

// FindOrError is like Find but returns a user-friendly error
func FindOrError(startDir string) (string, error)
```

## Return Values

- Success: Absolute path to town root
- Not found: Empty string + specific error
- Error: Empty string + wrapped error

## Edge Cases

- Symlinks: Follow them (use filepath.EvalSymlinks)
- Permissions: Return error if can't read directory
- Nested towns: Return nearest ancestor (shouldn't happen in practice
EOF
)


Digest: mol-deacon-patrol

Patrol 12: All healthy.


VC Pattern Integration: Bring validated ideas to Gas Town

Analysis of ~/src/vc identified 6 validated patterns from the 2nd orchestrator attempt that map cleanly to Gas Town primitives. VC achieved 254 issues closed, 90.9% gate pass rate, and 24 successful missions.

Key insight: VC built ~4300 lines of Go for features that become ~65 lines of YAML + CLI flags in Gas Town's architecture.

Child tasks track each pattern to integrate.


mol-polecat-work

Full polecat lifecycle from assignment to decommission.

This proto enables nondeterministic idempotence for polecat work.
A polecat that crashes after any step can restart, read its molecule state,
and continue from the last completed step. No work is lost.

Variables:
- gt-qwyu - The source issue ID being worked on


Polecat Lifecycle Events: Refinery-Witness Coordination

## Problem

Polecat work completion is currently treated as a single event (MR submission), but the true completion is when the Refinery merges the work. This creates a lifecycle gap:

1. Polecat submits MR → considered "done" by Witness
2. But MR might fail to merge (conflicts, test failures)
3. No one notifies anyone when merge actually succeeds

## Solution: Two-Event Lifecycle

**Event 1: MR Submitted**
- `gt mq submit` notifies Witness
- Witness verifies submission was clean
- Polecat can go idle (but worktree retained)
- If submission had issues, Witness can help

**Event 2: MR Merged**
- Refinery sends `LIFECYCLE: work merged` to Witness
- Witness updates polecat state to `merged`
- Worktree now eligible for full cleanup/recycling

## Village Sibling Watch

For robustness, patrol roles check on their siblings:
- Refinery checks Witness via `gt peek`
- Witness checks Refinery via `gt peek`
- Creates defense in depth - if primary notification fails, someone catches it

## Recovery

If Refinery misses sending lifecycle notification:
- Witness polecat-scan can detect: polecat in mr_submitted but MR shows merged
- Deacon orphan-check can detect: merged MRs with stale polecats


Create mol-gastown-polecat derived molecule

Create the standard Gas Town polecat workflow molecule.

## Molecule Definition
\`\`\`markdown
## Molecule: gastown-polecat
Full workflow for Gas Town polecats including binary installation.

Includes: mol-engineer-in-box

## Step: install-binary
After merge is submitted, rebuild and install the local gt binary.
This ensures the latest code is available to all local agents.

Run from the rig directory:
\`\`\`
go build -o gt ./cmd/gt
go install ./cmd/gt
\`\`\`

Needs: submit
\`\`\`

## Why This Molecule
Every polecat that pushes to main should also rebuild the binary.
This ensures the installed gt is always current with main.

## Implementation
1. Add to builtin_molecules.go (after Includes support lands)
2. Update SeedBuiltinMolecules
3. Run gt molecule seed

## Acceptance
- [ ] mol-gastown-polecat exists
- [ ] Includes all engineer-in-box steps
- [ ] Adds install-binary step after submit
- [ ] Can be used with gt spawn --molecule


mol-polecat-lease

Semaphore tracking a single polecat's lifecycle.
Vars: {{polecat}}, {{issue}}

Used by Witness to track polecat lifecycle during patrol. The Witness bonds
this proto for each active polecat, creating a lease that tracks the polecat
from spawn through work to cleanup.

## Step: boot
Spawned. Verify it starts working.

Check if the polecat is alive and working:
```bash
gt peek {{polecat}}
```

If idle for too long, nudge:
```bash
gt nudge {{polecat}} "Please start working on your assigned issue."
```

Timeout: 60s before escalation to Mayor.

## Step: working
Actively working. Monitor for stuck.

The polecat is processing its assigned issue ({{issue}}).
Monitor via peek. Watch for:
- Progress on commits
- Status updates in beads
- SHUTDOWN mail when done

Wait for SHUTDOWN signal from the polecat.
Needs: boot

## Step: done
Exit received. Ready for cleanup.

The polecat has completed its work and sent SHUTDOWN.
Perform cleanup:
```bash
gt session kill {{polecat}}
gt worktree prune {{polecat}}
```

Update beads state and close the lease.
Needs: working


Digest: mol-deacon-patrol

Patrol 1: All agents healthy, no lifecycle requests, cleaned 3 abandoned wisps


Test: New Router

Testing bd create for mail


Digest: mol-deacon-patrol

P14: stable


Update all documentation to remove hook references

14 docs reference hooks:
- docs/architecture.md
- docs/beads-data-plane.md
- docs/molecular-chemistry.md
- docs/molecules.md
- docs/pinned-beads-design.md
- docs/polecat-lifecycle.md
- docs/polecat-wisp-architecture.md
- docs/propulsion-principle.md
- docs/session-lifecycle.md
- docs/sling-design.md
- docs/vision.md
- docs/wisp-architecture.md
- docs/witness-patrol-design.md
- ~/gt/CLAUDE.md

Update all to reflect pinned beads as the sole propulsion mechanism.


Digest: mol-deacon-patrol

Patrol 5: 11 sessions, all healthy


Day 2.7a: gt install creates Deacon and Mayor agent beads

Update gt install to create agent beads:

1. After initializing town beads, create:
   - gt-deacon agent bead (role_type: deacon, rig: null, agent_state: idle)
   - gt-mayor agent bead (role_type: mayor, rig: null, agent_state: idle)

2. Use bd create --type=agent or internal beads API

Files:
- internal/cmd/install.go

Moved to gt rig add instead of gt install due to routing constraints. Agent beads need to be in rig beads (not town beads) for daemon to find them via prefix routing. First rig added gets gt-deacon and gt-mayor.


Evaluate pending async gates

Evaluate pending async gates.

Gates are async coordination primitives that block until conditions are met.
The Deacon is responsible for monitoring gates and closing them when ready.

**Timer gates** (await_type: timer):
Check if elapsed time since creation exceeds the timeout duration.

```bash
# List all open gates
bd gate list --json

# For each timer gate, check if elapsed:
# - CreatedAt + Timeout < Now → gate is ready to close
# - Close with: bd gate close <id> --reason "Timer elapsed"
```

**GitHub gates** (await_type: gh:run, gh:pr) - handled in separate step.

**Human/Mail gates** - require external input, skip here.

After closing a gate, the Waiters field contains mail addresses to notify.
Send a brief notification to each waiter that the gate has cleared.


Gate issue type and bd gate create

Add type=gate to beads schema. Implement bd gate create command with --await flag. Gates are special issues that represent wait conditions. Example: bd gate create --await timer:5m --title 'Wait for cooldown'


mol-polecat-arm formula

Define mol-polecat-arm.formula.yaml with steps: capture (gt peek worker), assess (analyze output for stalls/errors), intervene (gt nudge or escalate). This is the per-worker arm in Christmas Ornament pattern.


Digest: mol-deacon-patrol

Patrol 6: Quiet


Digest: mol-deacon-patrol

Patrol 20 - handoff threshold


Day 3.0: Document mail protocol for patrol coordination

Document the mail protocol used for patrol coordination.

**Mail types:**
- POLECAT_DONE: Polecat → Witness (work complete, ready for merge)
- MERGE_READY: Witness → Refinery (branch ready for merge queue)
- MERGED: Refinery → Witness (merge complete, safe to nuke)
- WITNESS_PING: Witness → Deacon (health check for second-order monitoring)
- HELP: Any → escalation target (stuck, need intervention)
- HANDOFF: Any → self (session continuity)

**Format conventions:**
- Subject prefix indicates type (e.g., 'POLECAT_DONE: nux')
- Body contains structured data (branch, bead ID, etc.)

This documentation enables consistent implementation across all patrol formulas.


Polecat writes files outside worktree (integration test)

During integration test gt-7psb8, polecat furiosa was asked to create ~/gt/gastown/test-polecat-integration.txt

It used Write tool with relative path '../../test-polecat-integration.txt' which resolved to gastown root instead of its worktree at ~/gt/gastown/polecats/furiosa/

Observed:
- File created at ~/gt/gastown/test-polecat-integration.txt (WRONG)
- Furiosa worktree at ~/gt/gastown/polecats/furiosa/ has no such file
- Furiosa branch has no commits of any new files

Root cause: Claude Code resolves relative paths from cwd, and the polecat may have been in the wrong directory or used incorrect path.

This caused the entire merge to be empty (branch at same commit as main).


Merge: slit-1767073379145

attached_args: Code review

branch: polecat/slit-1767073379145
target: main
source_issue: slit-1767073379145
rig: gastown


implement

Implement the solution for gt-u2vg. Follow codebase conventions.
File discovered work as new issues with bd create.

Make regular commits with clear messages.
Keep changes focused on the assigned issue.

Depends: load-context


mol-theme-generate: Custom name pool generation via cognition

Currently polecat name themes are hardcoded in namepool.go. Simple theme selection is fine as static config, but custom name generation should be a molecule.

Examples requiring cognition:
- "Generate 50 polecat names in the style of [book/movie/game]"
- "Create names that match the project's domain (medical, financial, etc.)"
- "Extend the mad-max theme with 20 more obscure characters"

## Molecule: theme-generate
Generate custom polecat names for a rig.

## Step: analyze-request
Understand the naming request:
- Theme style or source material
- Number of names needed
- Any constraints (length, format)

## Step: generate-candidates
Generate candidate names matching the style.
Aim for 2x the requested count.

## Step: validate-names
Filter candidates:
- No duplicates with existing themes
- Appropriate length (3-15 chars)
- No problematic terms

## Step: create-theme
Write the custom theme to rig config or beads.
Register in name pool.
Needs: validate-names

## Notes
- Output is a new theme entry in BuiltinThemes equivalent
- Could be stored as a pinned bead for persistence


Merge: gt-7919

branch: polecat/furiosa
target: main
source_issue: gt-7919
rig: gastown


test-agent-verify


Digest: mol-deacon-patrol

Patrol cycle 20: final cycle before handoff


Digest: mol-deacon-patrol

Quick patrol: no messages, all healthy


Digest: mol-deacon-patrol

Patrol 10: Quick cycle, 50% to handoff


Extend auto-continue to polecats (not just crew)

gt prime currently only outputs AUTO-CONTINUE MODE for crew workers.
Polecats with attached work should also auto-continue.

## Current behavior
outputCrewAttachmentStatus() in prime.go:
- Only runs for RoleCrew
- Outputs '→ AUTO-CONTINUE MODE' when attached work detected

## Desired behavior
- Rename to outputAttachmentStatus() or similar
- Run for RoleCrew AND RolePolecat
- Same directive: if attachment exists, work immediately

## The Propulsion Principle
'If you find something on your hook, YOU RUN IT.'

This applies to ALL workers, not just crew.

## Implementation
1. Extend role check in outputCrewAttachmentStatus()
2. Adjust assignee detection for polecats vs crew
3. Test with both worker types


Test2

Testing gt mail


Use Beads issue status as spawn source of truth

Currently witness tracks spawned issues in .gastown/witness.json to prevent re-spawning:

{"spawned_issues": ["gt-abc1", "gt-def2", ...]}

This is redundant with Beads issue status (in_progress). The witness could query:
  bd list --status=in_progress

The local list serves as a performance cache to avoid querying beads every cycle. Consider:
1. Use Beads as source of truth
2. Keep local cache with TTL
3. Sync cache on witness start

This simplifies state management and ensures consistency.


Polecat health check loop

Implement the Witness health check loop:

Every 60 seconds:
1. List active polecats (gt polecats <rig>)
2. For each polecat, check:
   - Is tmux session still alive?
   - Is there a state.json with recent update?
   - Has there been git activity recently?
3. If stuck (no activity for configurable threshold):
   - First: nudge (send message asking for status)
   - Second: escalate to Mayor
   - Third: force kill after human confirmation

This is the 'health monitor' part of Witness.


Implement gt watch command scaffold

Basic bubbletea TUI scaffold for 'gt watch' command. Discovers rigs, connects to daemons, renders placeholder view. Foundation for the full activity feed TUI.


Mayor Role Definition

You are the Mayor - global coordinator of Gas Town. You sit above all rigs,
coordinating work across the entire workspace.

default_molecule: mol-mayor-patrol
capabilities:
  - dispatch_work
  - cross_rig_coordination
  - escalation_handling

## Responsibilities

- Work dispatch: Spawn workers for issues, coordinate batch work on epics
- Cross-rig coordination: Route work between rigs when needed
- Escalation handling: Resolve issues Witnesses can't handle
- Strategic decisions: Architecture, priorities, integration planning

NOT your job: Per-worker cleanup, session killing, nudging workers (Witness handles that)

## Propulsion Principle

If you find something on your hook, YOU RUN IT.

Your pinned molecule persists across sessions. Hook has work -> Run it.
Hook empty -> Check mail. Nothing anywhere -> Wait for user.

## Key Commands

### Communication
- gt mail inbox - Check your messages
- gt mail read <id> - Read a specific message
- gt mail send <addr> -s "Subject" -m "Message" - Send mail

### Status
- gt status - Overall town status
- gt rigs - List all rigs
- gt polecats <rig> - List polecats in a rig

### Work Management
- bd ready - Issues ready to work (no blockers)
- gt sling <bead> <rig> - Assign work to polecat in rig

## Session End Protocol

- git status, git add, bd sync, git commit, git push
- gt handoff - hand off to fresh session


Digest: mol-deacon-patrol

Patrol 4: Quick cycle, all quiet


execute-actions

Send nudges, process shutdowns, escalate as decided.

Needs: decide-actions


gt mq integration create: create integration branch for epic

Implement 'gt mq integration create <epic>' command.

Actions:
1. Verify epic exists
2. Create branch: integration/<epic-id> from main
3. Push to origin
4. Store integration branch info in epic metadata

Usage:
  gt mq integration create gt-auth-epic
  # Creates integration/gt-auth-epic from main

Future MRs for this epic's children will auto-target this branch.

Reference: docs/merge-queue-design.md#integration-branches


Digest: mol-deacon-patrol

P7: escalation for mayor (wrong-rig work)


Digest: mol-deacon-patrol

Patrol 4: stable


boot

Spawned. Verify the polecat starts working.

Check if the polecat is alive and working:
```bash
gt peek {{polecat}}
```

If idle for too long (>60s), nudge:
```bash
gt nudge {{polecat}} "Please start working on your assigned issue."
```

Timeout: 60s before escalation to Mayor.
Variables: {{polecat}}, {{issue}}


Refactor sling to hook plus handoff

Replace gt sling with gt hook (durability) and gt handoff bead (hook+restart)


Wire up created_by field for beads issues

## Goal
Add actor/creator attribution to beads issues created by gastown.

## Done
- Added CreatedBy field to Issue struct
- Added Actor field to CreateOptions
- Pass --actor to bd create

## Remaining
1. Add ActorString() method to RoleInfo
2. Update beads.Create() callers to pass Actor
3. Update direct bd create exec calls to add --actor

## Context
Beads GH #748 added created_by field. Gastown needs to populate it.


Use cmd.OutOrStdout instead of fmt.Print in refinery

refinery/manager.go and refinery/engineer.go use fmt.Print/Println directly for user output (30+ occurrences). This breaks testability and doesn't follow cobra best practices. Should use cmd.OutOrStdout() or pass an io.Writer.

Affected files:
- internal/refinery/manager.go (lines 222, 360-361, 369, 387-393, 519, 537, 672)
- internal/refinery/engineer.go (lines 190-211, 249, 294-297, 325-353, 362-366)


Digest: mol-deacon-patrol @ 2025-12-24 19:43

Patrol 4: All healthy


Digest: mol-deacon-patrol

Patrol cycle 3: routine check, all healthy


Unified Beads Namespace - prefix-based routing across town

Vision: Run bd commands from anywhere in town, with prefix-based routing.

Current state:
- Town beads at ~/gt/.beads/ with hq-* prefix
- Rig beads at ~/gt/<rig>/mayor/rig/.beads/ with rig-specific prefixes (gt-, bd-, wy-, etc.)
- Redirects allow agents to use specific beads location
- No automatic prefix-based routing

Desired state:
- bd show gt-xyz from ANYWHERE in town → routes to gastown beads
- bd show hq-abc from ANYWHERE in town → routes to town beads
- bd show wy-def from ANYWHERE in town → routes to wyvern beads
- Prefix determines beads location automatically

Implementation options:
1. Registry file at town root mapping prefix → beads location
2. bd wrapper/hook that reads prefix and routes
3. Unified store with namespace prefixes (more invasive)

Related work:
- gt-0pdhj: Remove hardcoded gastown dependencies
- Template fixes needed for deacon, witness, refinery CLAUDE.md


Digest: mol-deacon-patrol

Patrol 8: clear


Digest: mol-deacon-patrol

Patrol 5: routine, all healthy


Agent scanner utility for filesystem

Filesystem scanner to discover agent directories in a rig or town.

## Deliverables

1. Function: ScanRigAgents(rigPath) -> []AgentAddr
   - Finds: witness/, refinery/, crew/*, polecats/*
   - Returns normalized addresses (e.g., "gastown/witness")

2. Function: ScanTownAgents(townPath) -> []AgentAddr
   - Iterates all rigs, calls ScanRigAgents for each
   - Returns all agent addresses in town

3. Alias resolution:
   - @rig/gastown → ScanRigAgents("gastown")
   - @town → ScanTownAgents()
   - @witnesses → filter for */witness across all rigs
   - @crew/gastown → filter crew/* in gastown

## Location
internal/discovery/scanner.go (new package)

## Acceptance
- Scanner finds all agent types
- Alias patterns resolve correctly
- Unit tests pass


Day 2.5: Test daemon pokes based on agent state

Integration test:
1. Create agent bead with state=idle
2. Sling work → hook_bead set
3. Verify daemon pokes
4. Update state=running
5. Verify daemon doesn't double-poke
6. Update state=stopped
7. Verify daemon re-pokes on new work

Parent: gt-d0jqp


Merge: gt-tnca.1

branch: polecat/immortan
target: main
source_issue: gt-tnca.1
rig: gastown


Digest: mol-deacon-patrol

Patrol 10: All services healthy


BUG: gt handoff --dry-run still sends mail

In handoff.go, the dry-run check happens AFTER sendHandoffMail() is called. This means --dry-run still sends mail.

**Location**: handoff.go L126-143

**Observed**: Testing with `gt handoff --dry-run -s 'Test' -m 'Message'` actually sent mail to mayor.

**Fix**: Move mail sending inside the non-dry-run block, or check dry-run first.

```go
// Current (buggy):
if handoffSubject \!= "" || handoffMessage \!= "" {
    sendHandoffMail(...)  // Executes even in dry-run\!
}
if handoffDryRun {        // Too late
    return nil
}

// Should be:
if handoffDryRun {
    // show what would happen
    return nil
}
// Then send mail
```


Add unit tests for daemon package

The daemon package has no unit tests. Need tests for:
- Config and state serialization
- Session name pattern matching (isWitnessSession)
- Lifecycle request parsing
- Identity to session mapping


Polecat beads not synced with rig beads

When gt spawn assigns an issue to a polecat, the polecat cannot find the issue because:

1. Rig beads at /gt/gastown/.beads contains gt-th7
2. Polecat beads at /gt/gastown/polecats/dementus/.beads does NOT have gt-th7
3. bd sync in polecat dir pulls from beads-sync branch which doesn't have the new issue
4. Rig bd sync uses 'main' branch, causing a branch mismatch

The polecat gets a work assignment for an issue it literally cannot see.

## Root Cause

- Rig beads and polecat beads are separate git-tracked copies
- No mechanism to propagate newly created issues from rig to polecats before assignment
- Sync branch configuration mismatch between rig and polecats

## Fix Options

1. gt spawn should sync rig beads before assigning work
2. gt spawn should sync polecat beads after assignment
3. Use shared beads (symlink or same DB) instead of copies
4. Push new issues immediately on create

Note: This sync mismatch is resolved by gt-9nf (fresh polecats). Rather than fixing sync between stale clones, we'll always create fresh worktrees. This issue documents the root cause for posterity.


gt sling: nudge witness+refinery when dispatching to polecat

When gt sling dispatches work to a polecat, wake the rig's witness and refinery.

## Boot+Nudge Pattern

```go
// After successful polecat dispatch
func wakeRigAgents(rig string) {
    // Level 2: Start if asleep
    exec.Command("gt", "rig", "boot", rig).Run()

    // Level 1: Clear backoff if running
    t := tmux.NewTmux()
    t.NudgeSession(fmt.Sprintf("gt-%s-witness", rig), "wake")
    t.NudgeSession(fmt.Sprintf("gt-%s-refinery", rig), "wake")
}
```

## Graceful Behavior

- `gt rig boot` is idempotent (no-op if already running)
- Nudge failures are silent (session might not exist yet)
- Agents discover what happened by checking reality

## Reference

See ~/gt/docs/patrol-system-design.md (Two-Level Wake section)


MQ conflict prediction: file hotspot tracking

Track which files change frequently to predict conflicts before spawn.

## Goal
Before spawning a polecat on an issue, warn if the target files are "hot" (recently changed by other MRs).

## Approach
1. Track file change frequency per MR (sliding window, e.g., last 24h)
2. At spawn time, analyze issue description / planned changes
3. If touching hot files, either:
   - Warn and proceed
   - Suggest waiting for queue to clear
   - Auto-assign to ownership zone (future)

## Implementation
- Add file_changes log to refinery state (or separate hotspot.json)
- After each merge, record changed files with timestamp
- gt spawn checks hotspots before assignment
- Optional: Witness patrol aggregates hotspot data

## Example
```
$ gt spawn --issue gt-xyz
Warning: This issue likely touches auth/login.go
  - Changed 3 times in last 2 hours
  - 2 MRs pending that also touch this file
Proceed anyway? [y/N]
```

## Parent
gt-lxxh2


Digest: mol-deacon-patrol

Patrol 5: Quick cycle, all quiet


Replace WaitForClaudeReady with gt peek for steady-state agent observation

## Problem

WaitForClaudeReady uses regex to detect Claude's prompt, which is a ZFC violation.

## Architectural Fix

**Bootstrap (ZFC violation acceptable):**
During cold town startup, no AI is available. Regex to get Deacon online is acceptable.

**Steady State (proper ZFC):**
Once any agent is running, AI should observe AI:
- Deacon starting polecats → Deacon uses gt peek
- Deacon restarting → Mayor watches via gt peek
- Mayor restarting → Deacon watches via gt peek

## Implementation

1. Keep WaitForClaudeReady for daemon bootstrap only
2. Update gt deacon trigger-pending to use gt peek
3. Document bootstrap vs steady-state distinction


mol-crew-session: Startup/shutdown protocols for crew workers

Crew workers (like joe, max) don't have patrol molecules keeping them fresh. When gt gets rebuilt, they have stale binaries that cause hangs and bugs.

## Problem

- Crew binaries get stale when gt is rebuilt elsewhere
- No automatic pull/rebase/rebuild on session start
- No standardized shutdown protocol (sync, push, handoff)

## Solution: mol-crew-session

A molecule template for crew sessions:

### Startup Phase
1. `git pull --rebase` - get latest code
2. `bd sync` - sync beads
3. `go build -o gt ./cmd/gt` - rebuild gt (if in gastown)
4. `gt prime` - load context

### Work Phase
- Open-ended human interaction
- No molecule steps - just work until done

### Shutdown Phase
1. `git status` - check for uncommitted changes
2. `bd sync` - sync beads
3. `git push` - push code
4. Handoff if incomplete work

## Implementation

1. Define mol-crew-session in builtin_molecules.go
2. Update crew CLAUDE.md to reference the protocol
3. Optionally: gt prime auto-runs startup steps

## Dependencies

- Should implement after deacon/witness/polecat patrols are stable
- Consider: gt-3x0z.10 (Witness patrol molecules)

## Related

- gt-3x0z.9: Deacon wisp patrol (done)
- fix-gt script: Current workaround for binary freshness


Digest: mol-deacon-patrol

Patrol 20: final check, all healthy, handoff threshold


Test activity feed enhancement


Support nested expansion formulas


Digest: mol-deacon-patrol

Cycle 9: quiet


Digest: mol-deacon-patrol

Cycle 10: quiet


CLI: plugin commands (list, status)

Add gt plugins <rig> to list plugins and gt plugin status <name> to check plugin state. Simple directory scan of <rig>/plugins/.


Digest: mol-deacon-patrol

Patrol complete: no inbox, no polecats, cleaned 3 stale locks, witnesses/refineries intentionally stopped


Digest: mol-deacon-patrol

Patrol 10: All agents healthy


Design GGT prompt architecture

Audit PGT prompts and design canonical prompt system for GGT. Create docs/prompts.md with inventory, gap analysis, and Witness prompt design.


Digest: mol-deacon-patrol

Patrol 14: All agents healthy


Digest: mol-deacon-patrol

Patrol 3: all clear


Deacon trigger-pending-spawns: Auto-nudge polecats when ready

The Deacon's mol-deacon-patrol defines a trigger-pending-spawns step, but it's not implemented.

## Problem
After gt spawn creates a polecat session, Claude initializes for 10-20s. Nobody sends the initial 'Begin.' message to start work, so polecats sit at prompts forever.

## Current Workaround
Manual: gt nudge gt-<rig>-<polecat> 'Begin.'

## Required Implementation
1. Track pending spawns (polecats spawned but not triggered)
2. In Deacon patrol, poll WaitForClaudeReady for each pending spawn
3. When ready, send 'Begin.' via NudgeSession
4. Mark as triggered

## Evidence
Tracer bullet 2025-12-23: Had to manually nudge polecat/tracer to start work.


Polecat Arm (arm-toast)

Single polecat inspection and action cycle.

This molecule is bonded dynamically by mol-witness-patrol's survey-workers step.
Each polecat being monitored gets one arm that runs in parallel with other arms.

## Variables

| Variable | Required | Description |
|----------|----------|-------------|
| polecat_name | Yes | Name of the polecat to inspect |
| rig | Yes | Rig containing the polecat |

## Step: capture
Capture recent tmux output for toast.

```bash
tmux capture-pane -t gt-gastown-toast -p | tail -50
```

Record:
- Last activity timestamp (when was last tool call?)
- Visible errors or stack traces
- Completion indicators ("Done", "Finished", etc.)

## Step: assess
Categorize polecat state based on captured output.

States:
- **working**: Recent tool calls, active processing
- **idle**: At prompt, no recent activity
- **error**: Showing errors or stack traces
- **requesting_shutdown**: Sent LIFECYCLE/Shutdown mail
- **done**: Showing completion indicators

Calculate: minutes since last activity.
Needs: capture

## Step: load-history
Read nudge history for toast from patrol state.

```
nudge_count = state.nudges[toast].count
last_nudge_time = state.nudges[toast].timestamp
```

This data was loaded by the parent patrol's load-state step and passed
to the arm via the bonding context.
Needs: assess

## Step: decide
Apply the nudge matrix to determine action for toast.

| State | Idle Time | Nudge Count | Action |
|-------|-----------|-------------|--------|
| working | any | any | none |
| idle | <10min | any | none |
| idle | 10-15min | 0 | nudge-1 (gentle) |
| idle | 15-20min | 1 | nudge-2 (direct) |
| idle | 20+min | 2 | nudge-3 (final) |
| idle | any | 3 | escalate |
| error | any | any | assess-severity |
| requesting_shutdown | any | any | pre-kill-verify |
| done | any | any | pre-kill-verify |

Nudge text:
1. "How's progress? Need any help?"
2. "Please wrap up soon. What's blocking you?"
3. "Final check. Will escalate in 5 min if no response."

Record decision and rationale.
Needs: load-history

## Step: execute
Take the decided action for toast.

**nudge-N**:
```bash
tmux send-keys -t gt-gastown-toast "{{nudge_text}}" Enter
```

**pre-kill-verify**:
```bash
cd polecats/toast
git status                    # Must be clean
git log origin/main..HEAD     # Check for unpushed
bd show <assigned-issue>      # Verify closed/deferred
```
If clean: kill session, remove worktree, delete branch
If dirty: record failure, retry next cycle

**escalate**:
```bash
gt mail send mayor/ -s "Escalation: toast stuck" -m "..."
```

**none**: No action needed.

Record: action taken, result, updated nudge count.
Needs: decide

## Output

The arm completes with:
- action_taken: none | nudge-1 | nudge-2 | nudge-3 | killed | escalated
- result: success | failed | pending
- updated_state: New nudge count and timestamp for toast

This data feeds back to the parent patrol's aggregate step.
---
bonded_from: mol-polecat-arm
bonded_to: gt-na7y
bonded_ref: arm-toast
bonded_at: 2025-12-23T10:00:00Z


Merge: gt-3x1.4

branch: polecat/Nux
target: main
source_issue: gt-3x1.4
rig: gastown


bd pin command fails: invalid field for update: pinned

In beads v0.32.0, `bd pin <id>` fails with 'invalid field for update: pinned'. The pinned field exists in the schema but update logic doesn't handle it.

Repro:
```
bd create 'test issue'
bd pin <id>
# Error: invalid field for update: pinned
```

Expected: Issue should be pinned.

This blocks gt mail send --pinned from working.


Digest: mol-deacon-patrol

Patrol 13: routine


gt swarm status fails to find issues via rig discovery

gt swarm status gt-1tpts fails with 'issue not found' but bd swarm status gt-1tpts works. The rig discovery in getAllRigs() may not be finding rigs correctly, or the bd commands are running from wrong directory.


Rig doctor checks: Refinery health, clones, gitignore

Rig-level doctor checks.

## Checks

### RigIsGitRepo
- Verify .git/ directory exists
- Verify git status works
- Fix: Cannot auto-fix

### GitExcludeConfigured
- Check .git/info/exclude contains Gas Town dirs
- Required entries: polecats/ witness/ refinery/ mayor/
- Fix: Append missing entries

### WitnessExists
- Verify witness/ directory exists
- Verify witness/rig/ is a git clone
- Verify witness/mail/inbox.jsonl exists
- Fix: Create structure, clone repo

### RefineryExists
- Verify refinery/ directory exists
- Verify refinery/rig/ is a git clone
- Verify refinery/mail/inbox.jsonl exists
- Fix: Create structure, clone repo

### MayorCloneExists
- Verify mayor/ directory exists
- Verify mayor/rig/ is a git clone
- Fix: Create structure, clone repo

### PolecatClonesValid
- For each polecat in polecats/:
  - Verify is a git clone
  - Verify on polecat branch
  - Warn if has uncommitted changes
- Fix: Cannot auto-fix (data loss risk)

### BeadsConfigValid (if applicable)
- If .beads/ exists, verify bd commands work
- Check beads sync status
- Warn if out of sync
- Fix: Run bd sync

## Implementation

```go
var RigChecks = []Check{
    &RigIsGitRepoCheck{},
    &GitExcludeConfiguredCheck{},
    &WitnessExistsCheck{},
    &RefineryExistsCheck{},
    &MayorCloneExistsCheck{},
    &PolecatClonesValidCheck{},
    &BeadsConfigValidCheck{},
}
```


Crew Role Definition

You are a Crew Worker - a human-managed persistent workspace within a rig.

Unlike polecats which are witness-managed and transient, crew workers are:
- Persistent: Not auto-garbage-collected
- User-managed: Overseer controls lifecycle
- Long-lived identities: Keep your name across sessions
- Gas Town integrated: Mail, handoff mechanics work

default_molecule: null
capabilities:
  - autonomous_work
  - beads_access
  - git_operations
  - mail_communication

## Core Responsibilities

1. Execute assigned work autonomously
2. Track progress via beads (bd commands)
3. Communicate via mail when blocked or complete
4. Maintain clean git state
5. Hand off context when cycling sessions

## Propulsion Principle

If you find something on your hook, YOU RUN IT.

Hook has work -> Run it. Hook empty -> Check mail. Nothing -> Wait for overseer.

## Session End Protocol

- git status, git add, bd sync, git commit, git push
- gt handoff - hand off to fresh session

## Key Commands

- gt mol status - Check your hook
- bd ready - Find next step
- bd close <id> - Mark work complete
- gt mail inbox - Check messages
- gt handoff - Cycle to fresh session


Digest: mol-deacon-patrol

Patrol 6: routine


Crew worker wolf in gastown - human-managed persistent workspace.

role_type: crew
rig: gastown
agent_state: idle
hook_bead: null
role_bead: gt-crew-gastown-wolf-role
cleanup_status: null


test message


Missing standard OSS files: CONTRIBUTING, CODE_OF_CONDUCT, SECURITY

For OSS launch, we need:
1. CONTRIBUTING.md - How to contribute, PR process, code style
2. CODE_OF_CONDUCT.md - Community standards
3. SECURITY.md - How to report vulnerabilities

These are expected by OSS communities and GitHub surfaces them in repo UI.


Activity stream infrastructure check

Verify activity stream infrastructure exists and is sufficient for MQ/witness events.

Check:
- Does gt feed already have event infrastructure?
- Can we emit custom events from Go code?
- What format do events need?

If infrastructure exists, close this. If not, implement minimal event emission.


Digest: mol-deacon-patrol

P20: stable - handoff triggered


Plugin: merge-oracle (merge queue analysis)

Example plugin that analyzes changesets before Refinery processes them. Builds overlap graph, classifies disjointness (parallel-safe vs needs-sequencing), uses LLM for semantic complexity, identifies high-risk patterns. Based on merge-orchestration proposal. See docs/architecture.md.


Digest: mol-deacon-patrol

Patrol complete: town quiet, all healthy


Digest: mol-deacon-patrol

Patrol 2: All healthy


announce: shared bulletin board

Announcement channel with shared single-copy storage.

## Deliverables

1. Parse announce:name syntax
2. Shared storage model (like queue, but no claim):
   - Single message copy
   - Multiple readers can view
   - Informational, not work-creating
3. Configuration in ~/gt/config/announce.json
4. Read tracking (optional): who has seen it

## Key semantics
- Informational broadcast
- Missing is OK (not critical)
- Use case: "Bob refactoring logging, be aware"

## Dependencies
- Config directory (gt-i6jvc)
- queue: implementation (pattern reference)

## Acceptance
- announce:status creates single shared message
- Multiple agents can read
- No claim semantics (read-only)


Request shutdown

Send shutdown request to Witness.
Wait for termination.

The polecat is now ready to be cleaned up.
Do not exit directly - wait for Witness to kill the session.


Digest: mol-deacon-patrol

Patrol 14: All clear


Daemon patrol should clean stale locks

The gt daemon patrol cycle should detect and clean up stale locks.

## Problem
If daemon crashes or there are orphaned locks, they can block operations indefinitely.

## Proposed Solution
During patrol cycle:
1. Check for lock files older than threshold (e.g., 5 minutes)
2. Verify owning process is dead (check PID if stored)
3. Remove stale locks
4. Log cleanup for audit


Digest: mol-deacon-patrol

Patrol 19: OK


Digest: mol-deacon-patrol

Patrol 19: All clear


Digest: mol-deacon-patrol

Patrol 13: all healthy


gt-polecat-gastown-nux

gt-polecat-gastown-nux

role_type: polecat
rig: gastown
agent_state: running
hook_bead: gt-2g130
role_bead: null


Digest: mol-deacon-patrol

Patrol 18: Quiet


Digest: mol-deacon-patrol

Patrol 17: all healthy


Digest: mol-witness-patrol

Patrol cycle 1: 3 polecats inspected (nux, slit, furiosa), all working. 4 initial nudges sent. Refinery nudged with 2 MRs. No escalations.


Digest: mol-deacon-patrol

Patrol 8: routine


Digest: mol-deacon-patrol

Patrol 10: full check, all healthy


Digest: mol-deacon-patrol

Patrol 2 complete: all healthy, no issues


self-review

Review your own changes. Look for:
- Bugs and edge cases
- Style issues
- Missing error handling
- Security concerns

Fix any issues found before proceeding.

Depends: implement


Deacon patrol banners: visual feedback on atom transitions

Print large ASCII banners when transitioning between patrol atoms.

## Problem

When the deacon progresses through patrol atoms (steps), there is no visual feedback.
The operator cannot easily see what the deacon is doing without reading the full output.

## Desired Behavior

Print banners on step start and completion:

  INBOX-CHECK - Checking for lifecycle requests, escalations, timers
  INBOX-CHECK COMPLETE - Processed 3 messages, 0 lifecycle requests

## Benefits

1. Scanability: Operator can glance at tmux and see what is happening
2. Progress tracking: Easy to see where in the patrol loop we are
3. Debugging: Clear demarcation between steps for troubleshooting

## Implementation Options

1. In deacon CLAUDE.md: Instruct agent to print banners
2. gt patrol step start/end: Commands that print banners
3. bd mol step hooks: Automatically on step transitions

## Related

- gt-id36: Deacon Kernel
- gt-rana: Patrol System


Implement Christmas Ornament pattern for mol-witness-patrol

Integrate dynamic bonding into mol-witness-patrol once Beads primitives are ready.

## Completed

- ✅ WaitsFor parsing (gt-odfr) - Parser now extracts WaitsFor: all-children
- ✅ mol bond command (gt-isje) - gt mol bond creates dynamic children with --var expansion
- ✅ WitnessPatrolMolecule() updated with Christmas Ornament structure (gt-tnow.1)
- ✅ PolecatArmMolecule() created for per-polecat inspection (gt-tnow.2)

## Remaining

- gt-tnow.3: Plugin hook support (P2)
- gt-tnow.4: Integration test with live polecats (P2)

## Design Docs

- docs/molecular-chemistry.md (already updated with pattern)
- docs/architecture.md (already updated with activity feed)
- gt-qflq: mol-witness-patrol design bead (updated)
- gt-dapb: mol-polecat-arm proto


Deacon patrol wisps should use town beads, not gastown rig beads

## Problem

The deacon is a town-level role but stores patrol wisps in gastown/mayor/rig/.beads/ (see internal/cmd/prime.go:691). This fails for users who don't have the gastown rig installed.

## Correct Architecture

Deacon -> ~/gt/.beads-wisp/ (town-level, no rig dependency)

Town-level ephemeral work (deacon patrols) should use town wisp storage, just like rig-level ephemeral work (witness/refinery patrols) uses rig wisp storage.

## Implementation Tasks

### 1. Town Setup (gt install / gt town init)

- Create ~/gt/.beads-wisp/ directory during town initialization
- Initialize as git repo (for local commits, not synced)
- Add config.yaml with wisp: true
- Ensure .beads-wisp/ is gitignored at town level

Files:
- internal/cmd/install.go (or equivalent town init)
- internal/town/manager.go (if exists)

### 2. Rig Setup (gt rig init)

Already creates <rig>/.beads-wisp/ - verify this is working:
- internal/rig/manager.go:375 (beadsDir := filepath.Join(rigPath, ".beads-wisp"))
- internal/rig/manager.go:394 (ensureGitignoreEntry)

### 3. Deacon Code Fixes

Update deacon to use town wisp storage:
- internal/cmd/prime.go:691 - change rigBeadsDir to townWispDir
- internal/cmd/sling.go - route deacon wisps to town level
- internal/daemon/daemon.go - any deacon-specific wisp handling

### 4. gt doctor Checks

Add/update doctor checks for wisp directories:
- internal/doctor/wisp_check.go - already checks rig wisps
- Add TownWispCheck to verify ~/gt/.beads-wisp/ exists
- Add TownWispGitCheck to verify it is a valid git repo
- Update existing checks to handle both town and rig levels

Files:
- internal/doctor/wisp_check.go (extend for town level)
- internal/doctor/checks.go (register new checks)

### 5. Documentation

- docs/beads-data-plane.md - already updated with three-tier architecture
- Verify wisp-architecture.md reflects town-level wisps

## Testing

1. Fresh gt install should create ~/gt/.beads-wisp/
2. gt doctor should pass with no rig installed
3. Deacon patrol should work without gastown rig
4. gt sling patrol deacon/ --wisp should route to town wisps


README missing prerequisites section (tmux required)

The README.md does not mention that tmux is required.
All agent sessions use tmux, but fresh users have no way to know this.

Add prerequisites section:
- Go 1.23+
- Git
- tmux (required for agent sessions)
- Claude Code CLI (for agents)


Day 4.1: Implement gt polecat recycle command

Add gt polecat recycle <name> command:
- Kill the Claude session (tmux kill-session)
- Preserve the sandbox (branch/worktree)
- Update agent bead state to 'stopped'
- Leave for respawn on next step

This enables session-per-step.

Parent: gt-4a2qt


Digest: mol-deacon-patrol

Patrol #4: Stable


MessagingConfig: Fix error message inconsistency in validation

Negative value errors don't wrap ErrMissingField while empty-list errors do. Should be consistent - either all wrap a sentinel or none do.


Design molecule step hooks

Hooks that fire between molecule steps. When a bead in a molecule closes, trigger hook that can spawn agent attention to prompts/requests. This enables reactive orchestration - the molecule drives, hooks respond. Gas Town feature built on Beads data plane.


Day 2.7c: gt doctor checks agent beads exist

Add gt doctor check: agent-beads-exist

1. For town-level: verify gt-deacon and gt-mayor beads exist
2. For each rig: verify gt-witness-<rig> and gt-refinery-<rig> beads exist
3. Report missing beads as warnings
4. Implement --fix to create missing beads

Files:
- internal/doctor/agent_beads_check.go (new)
- internal/cmd/doctor.go (register check)


ensure-daemon

Verify the Gas Town daemon is running.

## Action
```bash
gt daemon status || gt daemon start
```

## Verify
1. Daemon PID file exists: `~/.gt/daemon.pid`
2. Process is alive: `kill -0 $(cat ~/.gt/daemon.pid)`
3. Daemon responds: `gt daemon status` returns success

## OnStall
Daemon startup failed. Try:
```bash
gt daemon stop
sleep 2
gt daemon start
```

## OnFail
Cannot start daemon. Log error and continue - some commands work without daemon.


Digest: mol-deacon-patrol

Patrol 1: All healthy, no messages, no orphans


Digest: mol-deacon-patrol

Patrol 16: Nominal


gt dog add/remove/list/call/status CLI

Dog management commands:
- gt dog add <name> - Create dog in kennel with multi-rig worktrees
- gt dog remove <name> - Retire dog, cleanup worktrees
- gt dog list - Show the pack (all dogs with status)
- gt dog call [name] - Wake idle dog(s)
- gt dog status [name] - Show detailed dog state


Refinery: event-driven merge queue

## Problem
Refinery only acts on explicit requests, no queue management.

## ZFC-Compliant Solution
Add steps to `mol-refinery-patrol.formula.toml`:

```toml
[[step]]
id = "check-merge-requests"
title = "Process merge queue from inbox"
description = """
1. Check inbox for MERGE_READY messages: gt mail inbox
2. For each merge request:
   - Read branch name from message
   - Add to local queue (track in state.json or temp file)
3. Process queue in order:
   - git fetch origin
   - git checkout main && git pull
   - git merge --no-ff origin/polecat/<name>
   - If conflict: mail Mayor with details, skip
   - If success: git push && delete remote branch
4. For each merged branch:
   - gt mail send <rig>/witness -s "MERGED: polecat/<name>" -m "Branch merged successfully"
   - Delete the MERGE_READY mail
"""
depends_on = ["inbox-check"]
```

## Queue State
Refinery agent tracks queue in `state.json`:
```json
{
  "merge_queue": ["polecat/foo", "polecat/bar"],
  "last_merged": "polecat/baz"
}
```

## Why This Works
- Refinery Claude agent runs formula
- Agent handles conflicts with judgment
- Mail is coordination primitive
- State persists in agent's state.json

## Files
- formulas/mol-refinery-patrol.formula.toml


Digest: mol-deacon-patrol

Patrol 13: OK


Digest: mol-deacon-patrol

Patrol 16: nominal


Digest: mol-deacon-patrol

Patrol 19: All clear


Digest: mol-deacon-patrol

Patrol 9: nominal


Digest: mol-deacon-patrol

Patrol 2: All agents healthy, no messages, no orphans


Code Smell Cleanup: Gas Town Code Quality

Comprehensive code smell cleanup identified in code review session.

## Scope
Fixes for duplication, thread safety, missing tests, inconsistent patterns, and dead code.

## Child issues (18 total)

### Thread Safety & Data Integrity (P2)
- gt-wled7: Atomic write pattern for state files
- gt-xtsb5: Fix namepool Save() mutex
- gt-bp0ht: Add swarm.Manager mutex

### Duplication Removal (P2)
- gt-560ge: Extract processExists function
- gt-ddw3y: Extract molecule_lifecycle boilerplate
- gt-atqr8: Session name helper functions
- gt-ov2uv: AgentIdentity type for parsing

### Missing Tests (P2)
- gt-p2eg5: Lock package tests
- gt-0vu9e: mrqueue package tests
- gt-1pelm: mail router/mailbox tests

### Code Quality (P2)
- gt-gcnnr: Add logging for ignored errors

### Constants Extraction (P3)
- gt-4u682: SupportedShells constant
- gt-795e8: Timing constants

### Refactoring (P3)
- gt-tkbd5: Refactor runStart
- gt-dsqxw: Refactor runStartCrew

### Error Handling (P3)
- gt-h3skz: Remove os.Exit from RunE
- gt-g6kor: Standardize warning output

### Dead Code (P4)
- gt-2g130: Remove unused code

## Acceptance criteria
- [ ] All child issues closed
- [ ] go build ./... passes
- [ ] go test ./... passes
- [ ] go test -race ./... passes


Digest: mol-deacon-patrol

Patrol 10: all healthy, doctor pass


Design: Additional design issues (placeholder)

Placeholder for additional design issues the user wants to raise and work through. Convert to specific subtasks as issues are identified.


Swarm-in-Beads: Discovery-based swarm execution

Swarm-in-Beads: Make swarm state derive from beads, not separate JSON. See ~/gt/docs/swarm-architecture.md for full design. Core principles: discovery over tracking, ready front model, nondeterministic idempotence.


Design: Mayor session cycling and handoff

Design for Mayor session cycling and structured handoff.

## Overview

Mayor coordinates across all rigs and runs for extended periods. Needs session cycling pattern with structured handoff notes.

## Key Elements

1. Session cycling recognition (when to cycle)
2. Handoff note format (structured state capture)
3. Handoff delivery (mail to self)
4. Fresh session startup (reading and resuming)

## Subtasks (implementation)

- gt-g2d: Mayor session cycling prompting
- gt-sye: Mayor startup protocol prompting
- gt-vci: Mayor handoff mail template
- gt-1le: town handoff command (optional, P2)

**Design complete.** Each subtask has full specification in its description.


gt-gastown-polecat-toast

gt-gastown-polecat-toast

role_type: polecat
rig: gastown
agent_state: running
hook_bead: gt-794ba
role_bead: gt-polecat-role
cleanup_status: has_stash


load-context

Run gt prime and bd prime. Verify issue assignment.
Check inbox for any relevant messages.

Read the assigned issue (gt-ds3h3) and understand the requirements.
Identify any blockers or missing information.


Add event-triggered lifecycle wisps

Commands like `gt town start` should auto-trigger lifecycle wisps.

## Event → Wisp Mapping

| Command | Triggers Wisp |
|---------|---------------|
| gt town start | mol-gastown-boot |
| gt rig add <name> | mol-rig-spinup (param: rig=<name>) |
| gt rig remove <name> | mol-rig-spindown (param: rig=<name>) |
| gt daemon restart | mol-gastown-boot |

## Implementation

1. Command implementation checks for lifecycle proto
2. Auto-slings wisp to Mayor with --wisp flag
3. Mayor picks up via molecule attachment

## Alternative: Explicit Sling

Keep commands simple, require explicit:

```bash
gt town start        # Just starts sessions
gt sling gastown-boot mayor/ --wisp   # Bootstrap with verification
```

This is more transparent - user sees the sling happen.

## Recommendation

Start with explicit sling. Add auto-trigger later once pattern proven.
`gt town start --verified` could trigger the wisp.


Implement meta-formula generator in parser

Implement the generator that expands meta-formulas into concrete formulas.

## Implementation

1. Detect type: meta-formula in parser
2. Evaluate for-each values
3. For each value, instantiate the formula template
4. Substitute {var} placeholders with current value
5. Return list of generated Formula structs

## API

    func (p *Parser) ExpandMetaFormula(mf *MetaFormula) ([]*Formula, error)

## Edge Cases

- Empty values list: return empty slice
- Duplicate generated names: error
- Nested meta-formulas: error (not supported initially)


Merge: gt-5af.2

branch: polecat/Doof
target: main
source_issue: gt-5af.2
rig: gastown


Digest: mol-deacon-patrol

Patrol 16: All healthy, mayor handoff observed (not for deacon)


Refinery startup: Use Claude agent instead of foreground mode

WIP found in stash: Refactor refinery startup to spawn Claude as the refinery agent rather than using gt refinery start --foreground.

Changes needed:
- Use refineryDir (refinery/rig) as working directory
- Start Claude with --dangerously-skip-permissions
- Wait for shell ready, then Claude ready
- Send gt prime, then refinery startup prompt
- Remove foreground mode complexity

Related: gt-n7z7 (refinery --foreground race condition bug)


Digest: mol-deacon-patrol

Patrol 20: Nominal - Handoff threshold reached


Digest: mol-deacon-patrol

Patrol cycle 13: All healthy


Polecat Arm (arm-toast)

Single polecat inspection and action cycle.

This molecule is bonded dynamically by mol-witness-patrol's survey-workers step.
Each polecat being monitored gets one arm that runs in parallel with other arms.

## Variables

| Variable | Required | Description |
|----------|----------|-------------|
| polecat_name | Yes | Name of the polecat to inspect |
| rig | Yes | Rig containing the polecat |

## Step: capture
Capture recent tmux output for toast.

```bash
tmux capture-pane -t gt-gastown-toast -p | tail -50
```

Record:
- Last activity timestamp (when was last tool call?)
- Visible errors or stack traces
- Completion indicators ("Done", "Finished", etc.)

## Step: assess
Categorize polecat state based on captured output.

States:
- **working**: Recent tool calls, active processing
- **idle**: At prompt, no recent activity
- **error**: Showing errors or stack traces
- **requesting_shutdown**: Sent LIFECYCLE/Shutdown mail
- **done**: Showing completion indicators

Calculate: minutes since last activity.
Needs: capture

## Step: load-history
Read nudge history for toast from patrol state.

```
nudge_count = state.nudges[toast].count
last_nudge_time = state.nudges[toast].timestamp
```

This data was loaded by the parent patrol's load-state step and passed
to the arm via the bonding context.
Needs: assess

## Step: decide
Apply the nudge matrix to determine action for toast.

| State | Idle Time | Nudge Count | Action |
|-------|-----------|-------------|--------|
| working | any | any | none |
| idle | <10min | any | none |
| idle | 10-15min | 0 | nudge-1 (gentle) |
| idle | 15-20min | 1 | nudge-2 (direct) |
| idle | 20+min | 2 | nudge-3 (final) |
| idle | any | 3 | escalate |
| error | any | any | assess-severity |
| requesting_shutdown | any | any | pre-kill-verify |
| done | any | any | pre-kill-verify |

Nudge text:
1. "How's progress? Need any help?"
2. "Please wrap up soon. What's blocking you?"
3. "Final check. Will escalate in 5 min if no response."

Record decision and rationale.
Needs: load-history

## Step: execute
Take the decided action for toast.

**nudge-N**:
```bash
tmux send-keys -t gt-gastown-toast "{{nudge_text}}" Enter
```

**pre-kill-verify**:
```bash
cd polecats/toast
git status                    # Must be clean
git log origin/main..HEAD     # Check for unpushed
bd show <assigned-issue>      # Verify closed/deferred
```
If clean: kill session, remove worktree, delete branch
If dirty: record failure, retry next cycle

**escalate**:
```bash
gt mail send mayor/ -s "Escalation: toast stuck" -m "..."
```

**none**: No action needed.

Record: action taken, result, updated nudge count.
Needs: decide

## Output

The arm completes with:
- action_taken: none | nudge-1 | nudge-2 | nudge-3 | killed | escalated
- result: success | failed | pending
- updated_state: New nudge count and timestamp for toast

This data feeds back to the parent patrol's aggregate step.
---
bonded_from: mol-polecat-arm
bonded_to: gt-vhn1
bonded_ref: arm-toast
bonded_at: 2025-12-23T10:00:00Z


Digest: mol-deacon-patrol

Patrol 4: All healthy


Digest: mol-deacon-patrol

Patrol 17: All healthy


load-context

Run gt prime and bd prime. Verify issue assignment.
Check inbox for any relevant messages.

Read the assigned issue (gt-1wmw) and understand the requirements.
Identify any blockers or missing information.


Digest: mol-deacon-patrol

Cycle 3: quiet patrol


Digest: mol-deacon-patrol

Patrol 12: quiet


Create mol-refinery-patrol with test failure gates

## Problem

The Refinery role lacks:
1. A formal patrol molecule (Deacon has mol-deacon-patrol)
2. Engineer identity/philosophy guidance
3. Structural enforcement of failure handling (not just documentation)

When tests fail during merge processing, the current guidance doesn't prevent 'disavowal' - noting a problem exists and proceeding without tracking it.

## The Structural Solution

Create `mol-refinery-patrol` with **verification gates** that make disavowal structurally impossible:

```markdown
## Molecule: mol-refinery-patrol

## Step: inbox-check
Check mail for MR submissions, escalations, messages.
Process any urgent items first.

## Step: queue-scan
Fetch remote, identify polecat branches waiting.
If queue empty, skip to context-check.
Track branch list for this cycle.
Needs: inbox-check

## Step: process-branch
Pick next branch. Rebase on current main.
If rebase conflicts: notify polecat, skip to next branch.
Needs: queue-scan

## Step: run-tests
Run go test ./...
Track results (pass/fail count).
Needs: process-branch

## Step: handle-failures
**GATE**: If tests passed, this step auto-completes.
If tests failed:
- Diagnose: branch regression or pre-existing?
- Branch regression → abort, notify polecat
- Pre-existing → EITHER fix OR \`bd create --type=bug\`
**VERIFY**: Fix committed OR bead filed before proceeding.
Needs: run-tests

## Step: merge-push
Merge to main (ff-only preferred).
Push immediately.
Delete polecat branch.
Needs: handle-failures

## Step: loop-check
More branches? Return to process-branch.
Otherwise continue to summary.
Needs: merge-push

## Step: generate-summary
Summarize cycle: branches processed, tests results, issues filed.
Needs: loop-check

## Step: context-check
Check context usage.
If high: write handoff, prepare for burn/respawn.
Needs: generate-summary

## Step: burn-or-loop
If context LOW and queue non-empty: loop (return to queue-scan)
If context HIGH or queue empty: burn and exit
Needs: context-check
```

## Implementation Tasks

### 1. Add RefineryPatrolMolecule() to builtin_molecules.go
- Copy pattern from DeaconPatrolMolecule
- Include all steps with proper `Needs:` dependencies
- Emphasize handle-failures gate in description

### 2. Update Refinery CLAUDE.md
Add sections:
- **The Engineer Mindset** (identity/philosophy)
- **The Scotty Test** (Would Scotty walk past this?)
- **Patrol Molecule** reference (mol-refinery-patrol)
- **Test Failure Protocol** (explicit decision tree)

### 3. Create prompts/roles/refinery.md
- Follow pattern of deacon.md
- Include patrol execution loop diagram
- Reference the molecule

### 4. Consider mol-witness-patrol
- Witness has detailed heartbeat protocol but no formal molecule
- Similar pattern could apply

## Why This Matters

GUPP: 'If you have work on your hook, you have to run it.'
The patrol molecule puts failure handling ON THE HOOK as a mandatory step.
You can't skip handle-failures to get to merge-push.
The structure enforces good behavior.

## Related
- gt-7919: Fix failing beads tests (discovered during this session)
- mol-deacon-patrol (existing pattern to follow)
- docs/molecular-chemistry.md (chemistry concepts)
- docs/wisp-architecture.md (wisp vs mol decision)


Digest: mol-deacon-patrol

Patrol 12: All green


Merge: nux-1767073376184

branch: polecat/nux-1767073376184
target: main
source_issue: nux-1767073376184
rig: gastown


Tmux session scanner for running agents

Scan tmux for running Gas Town agent sessions.

## Deliverables

1. Function: ScanRunningSessions() -> []AgentAddr
   - Parse tmux list-sessions
   - Filter for Gas Town session naming pattern
   - Return addresses of running agents

2. Function: ScanRigSessions(rig) -> []AgentAddr
   - Filter running sessions by rig prefix

3. Alias resolution:
   - #rig/gastown → running sessions in gastown
   - #town → all running Gas Town sessions
   - #witnesses → running witness sessions

## Location
internal/discovery/tmux.go

## Acceptance
- Scanner finds running sessions
- Correctly parses session names to addresses
- Handles no-sessions case gracefully


Witness emits activity events

Witness emits events to activity stream for patrol activity:

Events to emit:
- patrol_started: When witness begins patrol cycle
- polecat_checked: When witness checks a polecat
- polecat_nudged: When witness nudges a stuck polecat
- escalation_sent: When witness escalates to Mayor/Deacon
- patrol_complete: When patrol cycle finishes

This replaces stats tracking in .runtime/witness.json