Adds the gt molecule seed subcommand that creates built-in molecule definitions (engineer-in-box, quick-fix, research) in the beads database. - Brings molecule.go from main (with list, show, parse, instantiate, instances) - Adds builtin_molecules.go with 3 built-in workflow templates - SeedBuiltinMolecules() writes directly to JSONL to bypass bd CLI type validation - Molecules use well-known IDs (mol-engineer-in-box, mol-quick-fix, mol-research) - Command is idempotent - skips molecules that already exist Note: bd CLI does not yet support molecule as a valid issue type. Filed beads-1 to add molecule type support. Until then, use bd --no-db. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
225 lines
5.4 KiB
Go
225 lines
5.4 KiB
Go
// Package beads provides a wrapper for the bd (beads) CLI.
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package beads
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import (
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"bufio"
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"encoding/json"
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"fmt"
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"os"
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"path/filepath"
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"time"
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)
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// BuiltinMolecule defines a built-in molecule template.
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type BuiltinMolecule struct {
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ID string // Well-known ID (e.g., "mol-engineer-in-box")
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Title string
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Description string
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}
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// BuiltinMolecules returns all built-in molecule definitions.
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func BuiltinMolecules() []BuiltinMolecule {
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return []BuiltinMolecule{
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EngineerInBoxMolecule(),
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QuickFixMolecule(),
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ResearchMolecule(),
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}
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}
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// EngineerInBoxMolecule returns the engineer-in-box molecule definition.
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// This is a full workflow from design to merge.
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func EngineerInBoxMolecule() BuiltinMolecule {
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return BuiltinMolecule{
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ID: "mol-engineer-in-box",
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Title: "Engineer in a Box",
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Description: `Full workflow from design to merge.
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## Step: design
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Think carefully about architecture. Consider:
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- Existing patterns in the codebase
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- Trade-offs between approaches
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- Testability and maintainability
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Write a brief design summary before proceeding.
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## Step: implement
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Write the code. Follow codebase conventions.
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Needs: design
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## Step: review
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Self-review the changes. Look for:
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- Bugs and edge cases
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- Style issues
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- Missing error handling
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Needs: implement
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## Step: test
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Write and run tests. Cover happy path and edge cases.
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Fix any failures before proceeding.
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Needs: implement
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## Step: submit
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Submit for merge via refinery.
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Needs: review, test`,
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}
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}
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// QuickFixMolecule returns the quick-fix molecule definition.
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// This is a fast path for small changes.
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func QuickFixMolecule() BuiltinMolecule {
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return BuiltinMolecule{
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ID: "mol-quick-fix",
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Title: "Quick Fix",
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Description: `Fast path for small changes.
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## Step: implement
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Make the fix. Keep it focused.
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## Step: test
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Run relevant tests. Fix any regressions.
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Needs: implement
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## Step: submit
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Submit for merge.
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Needs: test`,
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}
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}
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// ResearchMolecule returns the research molecule definition.
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// This is an investigation workflow.
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func ResearchMolecule() BuiltinMolecule {
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return BuiltinMolecule{
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ID: "mol-research",
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Title: "Research",
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Description: `Investigation workflow.
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## Step: investigate
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Explore the question. Search code, read docs,
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understand context. Take notes.
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## Step: document
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Write up findings. Include:
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- What you learned
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- Recommendations
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- Open questions
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Needs: investigate`,
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}
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}
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// jsonlIssue represents an issue in the JSONL format.
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// This struct matches the beads JSONL schema for direct file writes.
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type jsonlIssue struct {
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ID string `json:"id"`
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Title string `json:"title"`
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Description string `json:"description"`
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Status string `json:"status"`
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Priority int `json:"priority"`
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IssueType string `json:"issue_type"`
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CreatedAt string `json:"created_at"`
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UpdatedAt string `json:"updated_at"`
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}
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// SeedBuiltinMolecules creates all built-in molecules in the beads database.
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// It skips molecules that already exist (by ID match).
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// Returns the number of molecules created.
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//
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// Note: Since the bd CLI doesn't support the "molecule" type, this function
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// writes directly to the JSONL file to create molecules with the proper type.
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func (b *Beads) SeedBuiltinMolecules() (int, error) {
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molecules := BuiltinMolecules()
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created := 0
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// Find the JSONL file
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jsonlPath := filepath.Join(b.workDir, ".beads", "issues.jsonl")
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if _, err := os.Stat(jsonlPath); os.IsNotExist(err) {
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return 0, fmt.Errorf("beads JSONL not found: %s", jsonlPath)
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}
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// Read existing issues to check for duplicates
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existingIDs, err := readExistingIDs(jsonlPath)
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if err != nil {
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return 0, fmt.Errorf("reading existing issues: %w", err)
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}
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// Prepare new molecules to add
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var newMolecules []jsonlIssue
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now := time.Now().Format(time.RFC3339Nano)
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for _, mol := range molecules {
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if existingIDs[mol.ID] {
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continue // Already exists
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}
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newMolecules = append(newMolecules, jsonlIssue{
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ID: mol.ID,
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Title: mol.Title,
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Description: mol.Description,
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Status: "open",
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Priority: 2, // Medium priority
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IssueType: "molecule",
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CreatedAt: now,
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UpdatedAt: now,
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})
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created++
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}
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if len(newMolecules) == 0 {
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return 0, nil
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}
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// Append new molecules to the JSONL file
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f, err := os.OpenFile(jsonlPath, os.O_APPEND|os.O_WRONLY, 0644)
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if err != nil {
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return 0, fmt.Errorf("opening JSONL for append: %w", err)
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}
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defer f.Close()
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for _, mol := range newMolecules {
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line, err := json.Marshal(mol)
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if err != nil {
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return created, fmt.Errorf("marshaling molecule %s: %w", mol.ID, err)
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}
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if _, err := f.Write(append(line, '\n')); err != nil {
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return created, fmt.Errorf("writing molecule %s: %w", mol.ID, err)
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}
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}
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return created, nil
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}
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// readExistingIDs reads the JSONL file and returns a set of existing issue IDs.
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func readExistingIDs(jsonlPath string) (map[string]bool, error) {
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ids := make(map[string]bool)
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f, err := os.Open(jsonlPath)
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if err != nil {
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return nil, err
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}
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defer f.Close()
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scanner := bufio.NewScanner(f)
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// Increase buffer size for long lines
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buf := make([]byte, 0, 64*1024)
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scanner.Buffer(buf, 1024*1024)
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for scanner.Scan() {
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line := scanner.Bytes()
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if len(line) == 0 {
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continue
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}
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// Just extract the ID field - we don't need to parse the full issue
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var partial struct {
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ID string `json:"id"`
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}
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if err := json.Unmarshal(line, &partial); err != nil {
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continue // Skip malformed lines
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}
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if partial.ID != "" {
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ids[partial.ID] = true
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}
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}
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return ids, scanner.Err()
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}
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