feat(skills): Improve parallel beads workflow with in_review status

- Add step to mark beads as 'in_review' after PR creation - Add PR URL to bead notes for traceability - Create reconcile_beads skill to close beads when PRs are merged - Update summary table to show bead status instead of generic status Implements bead: nixos-configs-85h
2026-01-10 12:38:06 -08:00
11 changed files with 208 additions and 192 deletions
--- a/.beads/sync_base.jsonl
+++ b/.beads/sync_base.jsonl
--- a/.gitignore
+++ b/.gitignore
@@ -1,3 +1,2 @@
 result
 thoughts
-.beads
--- a/.goosehints
+++ b/.goosehints
@@ -9,7 +9,7 @@ Directory Structure:
 ----------------------
 • packages/      - Custom Nix packages leveraged across various configurations.
 • roles/         - Role-based configurations (e.g., kodi, bluetooth) each with its own module (default.nix) for inclusion in machine setups.
-• machines/      - Machine-specific configurations (e.g., nix-book, zix790prors, boxy) including configuration.nix and hardware-configuration.nix tailored for each hardware.
+• machines/      - Machine-specific configurations (e.g., nix-book, z790prors, boxy, wixos) including configuration.nix and hardware-configuration.nix tailored for each hardware.
 • home/          - Home-manager configurations for personal environments and application settings (e.g., home-nix-book.nix, home-z790prors.nix).

 Design Principles:
--- a/AGENTS.md
+++ b/AGENTS.md
@@ -10,7 +10,7 @@ This is a NixOS configuration repository using flakes, managing multiple machine

 ### Flake Structure
 - **flake.nix**: Main entry point defining inputs (nixpkgs, home-manager, plasma-manager, etc.) and outputs for multiple NixOS configurations
- **Machines**: `nix-book`, `boxy`, `zix790prors`, `live-usb`, `johno-macbookpro` (Darwin/macOS)
+- **Machines**: `nix-book`, `boxy`, `wixos` (WSL configuration), `zix790prors`, `live-usb`, `johno-macbookpro` (Darwin/macOS)
 - **Home configurations**: Standalone home-manager configuration for user `johno`

 ### Directory Structure
@@ -74,6 +74,7 @@ The repository also uses a modular home-manager role system for user-space confi
 - **nix-book**: Compact laptop → excludes office/media roles due to SSD space constraints
 - **boxy**: Living room media center → optimized for media consumption, excludes sync/office (shared machine)
 - **zix790prors**: All-purpose workstation → full desktop experience with all roles enabled
+- **wixos**: WSL2 development → full desktop experience, inherits from zix790prors Windows host
 - **live-usb**: Temporary environment → only base + desktop roles, no persistent services
 - **johno-macbookpro**: macOS work laptop → Darwin-specific configuration with development tools

@@ -106,6 +107,7 @@ darwin-rebuild build --flake .#johno-macbookpro
 - `nix-book`: Compact laptop with storage constraints, uses `home/home-laptop-compact.nix`
 - `boxy`: Shared living room media center/gaming desktop with AMD GPU, uses `home/home-media-center.nix`
 - `zix790prors`: Powerful all-purpose workstation (gaming, 3D modeling, development), dual-boots Windows 11 with shared btrfs /games partition, uses `home/home-desktop.nix`
+- `wixos`: WSL2 development environment running in Windows partition of zix790prors, uses `home/home-desktop.nix`
 - `live-usb`: Bootable ISO configuration, uses `home/home-live-usb.nix`
 - `johno-macbookpro`: macOS work laptop, uses `home/home-darwin-work.nix`

--- a/flake.lock
+++ b/flake.lock
@@ -21,42 +21,19 @@
        "type": "github"
      }
    },
-    "doomemacs": {
+    "flake-compat": {
      "flake": false,
      "locked": {
-        "lastModified": 1767773143,
-        "narHash": "sha256-QL/t9v2kFNxBDyNJb/s411o3mxujan+QX5IZglTdpTk=",
-        "owner": "doomemacs",
-        "repo": "doomemacs",
-        "rev": "3e15fb36d7f94f0a218bda977be4d3f5da983a71",
+        "lastModified": 1765121682,
+        "narHash": "sha256-4VBOP18BFeiPkyhy9o4ssBNQEvfvv1kXkasAYd0+rrA=",
+        "owner": "edolstra",
+        "repo": "flake-compat",
+        "rev": "65f23138d8d09a92e30f1e5c87611b23ef451bf3",
        "type": "github"
      },
      "original": {
-        "owner": "doomemacs",
-        "repo": "doomemacs",
-        "type": "github"
-      }
-    },
-    "emacs-overlay": {
-      "inputs": {
-        "nixpkgs": [
-          "nix-doom-emacs-unstraightened"
-        ],
-        "nixpkgs-stable": [
-          "nix-doom-emacs-unstraightened"
-        ]
-      },
-      "locked": {
-        "lastModified": 1768011937,
-        "narHash": "sha256-SnU2XTo34vwVaijs+4VwcXTNwMWO4nwzzs08N39UagA=",
-        "owner": "nix-community",
-        "repo": "emacs-overlay",
-        "rev": "79abf71d9897cf3b5189f7175cda1b1102abc65c",
-        "type": "github"
-      },
-      "original": {
-        "owner": "nix-community",
-        "repo": "emacs-overlay",
+        "owner": "edolstra",
+        "repo": "flake-compat",
        "type": "github"
      }
    },
@@ -182,27 +159,6 @@
        "type": "github"
      }
    },
-    "nix-doom-emacs-unstraightened": {
-      "inputs": {
-        "doomemacs": "doomemacs",
-        "emacs-overlay": "emacs-overlay",
-        "nixpkgs": [],
-        "systems": "systems_2"
-      },
-      "locked": {
-        "lastModified": 1768034604,
-        "narHash": "sha256-62pIZMvGHhYJmMiiBsxHqZt/dFyENPcFHlJq5NJF3Sw=",
-        "owner": "marienz",
-        "repo": "nix-doom-emacs-unstraightened",
-        "rev": "9b3b8044fe4ccdcbb2d6f733d7dbe4d5feea18bc",
-        "type": "github"
-      },
-      "original": {
-        "owner": "marienz",
-        "repo": "nix-doom-emacs-unstraightened",
-        "type": "github"
-      }
-    },
    "nix-github-actions": {
      "inputs": {
        "nixpkgs": [
@@ -225,18 +181,38 @@
        "type": "github"
      }
    },
-    "nixpkgs": {
+    "nixos-wsl": {
+      "inputs": {
+        "flake-compat": "flake-compat",
+        "nixpkgs": "nixpkgs"
+      },
      "locked": {
-        "lastModified": 1767480499,
-        "narHash": "sha256-8IQQUorUGiSmFaPnLSo2+T+rjHtiNWc+OAzeHck7N48=",
-        "owner": "nixos",
-        "repo": "nixpkgs",
-        "rev": "30a3c519afcf3f99e2c6df3b359aec5692054d92",
+        "lastModified": 1765841014,
+        "narHash": "sha256-55V0AJ36V5Egh4kMhWtDh117eE3GOjwq5LhwxDn9eHg=",
+        "owner": "nix-community",
+        "repo": "NixOS-WSL",
+        "rev": "be4af8042e7a61fa12fda58fe9a3b3babdefe17b",
        "type": "github"
      },
      "original": {
-        "owner": "nixos",
-        "ref": "nixos-25.11",
+        "owner": "nix-community",
+        "ref": "main",
+        "repo": "NixOS-WSL",
+        "type": "github"
+      }
+    },
+    "nixpkgs": {
+      "locked": {
+        "lastModified": 1765472234,
+        "narHash": "sha256-9VvC20PJPsleGMewwcWYKGzDIyjckEz8uWmT0vCDYK0=",
+        "owner": "NixOS",
+        "repo": "nixpkgs",
+        "rev": "2fbfb1d73d239d2402a8fe03963e37aab15abe8b",
+        "type": "github"
+      },
+      "original": {
+        "owner": "NixOS",
+        "ref": "nixos-unstable",
        "repo": "nixpkgs",
        "type": "github"
      }
@@ -257,6 +233,22 @@
        "type": "github"
      }
    },
+    "nixpkgs_2": {
+      "locked": {
+        "lastModified": 1767480499,
+        "narHash": "sha256-8IQQUorUGiSmFaPnLSo2+T+rjHtiNWc+OAzeHck7N48=",
+        "owner": "nixos",
+        "repo": "nixpkgs",
+        "rev": "30a3c519afcf3f99e2c6df3b359aec5692054d92",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nixos",
+        "ref": "nixos-25.11",
+        "repo": "nixpkgs",
+        "type": "github"
+      }
+    },
    "plasma-manager": {
      "inputs": {
        "home-manager": [
@@ -311,8 +303,8 @@
        "home-manager-unstable": "home-manager-unstable",
        "jovian": "jovian",
        "nix-darwin": "nix-darwin",
-        "nix-doom-emacs-unstraightened": "nix-doom-emacs-unstraightened",
-        "nixpkgs": "nixpkgs",
+        "nixos-wsl": "nixos-wsl",
+        "nixpkgs": "nixpkgs_2",
        "nixpkgs-unstable": "nixpkgs-unstable",
        "plasma-manager": "plasma-manager",
        "plasma-manager-unstable": "plasma-manager-unstable"
@@ -332,21 +324,6 @@
        "repo": "default",
        "type": "github"
      }
-    },
-    "systems_2": {
-      "locked": {
-        "lastModified": 1681028828,
-        "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=",
-        "owner": "nix-systems",
-        "repo": "default",
-        "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e",
-        "type": "github"
-      },
-      "original": {
-        "owner": "nix-systems",
-        "repo": "default",
-        "type": "github"
-      }
    }
  },
  "root": "root",
--- a/flake.nix
+++ b/flake.nix
@@ -4,6 +4,7 @@
  inputs = {
    nixpkgs.url = "github:nixos/nixpkgs/nixos-25.11";
    nixpkgs-unstable.url = "github:nixos/nixpkgs/nixos-unstable";
+    nixos-wsl.url = "github:nix-community/NixOS-WSL/main";
    
    nix-darwin = {
      url = "github:nix-darwin/nix-darwin/nix-darwin-25.11";
@@ -46,15 +47,9 @@
      url = "github:steveyegge/beads";
      inputs.nixpkgs.follows = "nixpkgs-unstable";
    };
-
-    nix-doom-emacs-unstraightened = {
-      url = "github:marienz/nix-doom-emacs-unstraightened";
-      # Don't follow nixpkgs to avoid rebuild issues with emacs-overlay
-      inputs.nixpkgs.follows = "";
-    };
  };

-  outputs = { self, nixpkgs, nixpkgs-unstable, ... } @ inputs: let
+  outputs = { self, nixpkgs, nixpkgs-unstable, nixos-wsl, ... } @ inputs: let
    nixosModules = [
      ./roles
    ] ++ [
@@ -75,7 +70,6 @@
        home-manager.useUserPackages = true;
        home-manager.sharedModules = [
          inputs.plasma-manager.homeModules.plasma-manager
-          inputs.nix-doom-emacs-unstraightened.homeModule
        ];
        home-manager.extraSpecialArgs = {
          globalInputs = inputs;
@@ -104,7 +98,6 @@
        home-manager.useUserPackages = true;
        home-manager.sharedModules = [
          inputs.plasma-manager-unstable.homeModules.plasma-manager
-          inputs.nix-doom-emacs-unstraightened.homeModule
        ];
        home-manager.extraSpecialArgs = {
          globalInputs = inputs;
@@ -136,9 +129,6 @@
        ];
        home-manager.useGlobalPkgs = true;
        home-manager.useUserPackages = true;
-        home-manager.sharedModules = [
-          inputs.nix-doom-emacs-unstraightened.homeModule
-        ];
        home-manager.extraSpecialArgs = {
          globalInputs = inputs;
        };
@@ -175,6 +165,19 @@
      ];
    };

+    nixosConfigurations.wixos = nixpkgs.lib.nixosSystem rec {
+      system = "x86_64-linux";
+      modules = nixosModules ++ [
+        nixos-wsl.nixosModules.default
+        ./machines/wixos/configuration.nix
+        inputs.home-manager.nixosModules.home-manager
+        {
+          home-manager.users.johno = import ./home/home-desktop.nix;
+          home-manager.extraSpecialArgs = { inherit system; };
+        }
+      ];
+    };
+
    nixosConfigurations.zix790prors = nixpkgs.lib.nixosSystem rec {
      system = "x86_64-linux";
      modules = nixosModules ++ [
--- a/home/home-live-usb.nix
+++ b/home/home-live-usb.nix
@@ -14,12 +14,7 @@
    desktop.enable = true;
    tmux.enable = true;
    plasma-manager.enable = true;
-    emacs = {
-      enable = true;
-      # Use pre-built Doom Emacs - all packages built at nix build time
-      # This means no doom sync is needed after booting the live USB
-      prebuiltDoom = true;
-    };
+    emacs.enable = true;
    i3_sway.enable = true;
    starship.enable = true;
    # development.enable = false;  # Not needed for live USB
--- a/home/roles/development/skills/reconcile_beads.md
+++ b/home/roles/development/skills/reconcile_beads.md
@@ -23,11 +23,9 @@ bd list --status=in_review

 1. **Get the PR URL from bead notes**:
   ```bash
-   bd show [BEAD_ID] --json | jq -r '.[0].notes'
+   bd show [BEAD_ID] --json | jq -r '.notes'
   ```
-   Note: `bd show --json` returns an array, so use `.[0]` to access the first element.
-   Extract the PR URL (look for lines starting with "PR:" or containing pull request URLs).
-   Extract the PR number: `echo "$NOTES" | grep -oP '/pulls/\K\d+'`
+   Extract the PR URL (look for lines starting with "PR:" or containing pull request URLs)

 2. **Detect hosting provider**:
   - Run `git remote get-url origin`
@@ -40,10 +38,9 @@ bd list --status=in_review
     ```
   - For Gitea:
     ```bash
-     tea pr list --state=closed
+     tea pr view [PR_NUMBER]
     ```
-     Look for the PR number in the INDEX column with STATE "merged".
-     Note: `tea pr view [PR_NUMBER]` lists all PRs, not a specific one. Use `tea pr list --state=closed` and look for your PR number in the results.
+     Look for "State: merged" or "State: closed"

 ### Step 3: Close merged beads

--- a/home/roles/emacs/default.nix
+++ b/home/roles/emacs/default.nix
@@ -23,30 +23,13 @@ let
    if pkgs.stdenv.isDarwin
    then pkgs.emacs-macport.pkgs.withPackages emacsPackages
    else pkgs.emacs.pkgs.withPackages emacsPackages;
-
-  # Path to doom config directory (relative to this file)
-  doomConfigDir = ./doom;
 in
 {
  options.home.roles.emacs = {
    enable = mkEnableOption "Doom Emacs with vterm and tree-sitter support";
-
-    prebuiltDoom = mkOption {
-      type = types.bool;
-      default = false;
-      description = ''
-        Use nix-doom-emacs-unstraightened to pre-build all Doom packages at
-        nix build time. This eliminates the need to run `doom sync` after
-        first boot, making it ideal for live USB images or immutable systems.
-
-        When enabled, the doom configuration is read-only (stored in nix store).
-      '';
-    };
  };

-  config = mkIf cfg.enable (mkMerge [
-    # Common configuration for both modes
-    {
+  config = mkIf cfg.enable {
    home.packages = [
      pkgs.emacs-all-the-icons-fonts
      pkgs.fira-code
@@ -63,16 +46,13 @@ in
      pkgs.python3
    ];

-      fonts.fontconfig.enable = true;
-    }
-
-    # Standard Doom Emacs mode (requires doom sync at runtime)
-    (mkIf (!cfg.prebuiltDoom) {
    programs.emacs = {
      enable = true;
      package = defaultEmacsPackage;
    };

+    fonts.fontconfig.enable = true;
+
    # Mount emacs and tree-sitter grammars from nix store
    home.file = {
      "${config.xdg.configHome}/emacs".source = doomEmacs;
@@ -93,20 +73,5 @@ in
      rm -rf "${config.xdg.configHome}/doom"
      ln -sf "${config.home.homeDirectory}/nixos-configs/home/roles/emacs/doom" "${config.xdg.configHome}/doom"
    '';
-    })
-
-    # Pre-built Doom Emacs mode (no doom sync needed - ideal for live USB)
-    (mkIf cfg.prebuiltDoom {
-      programs.doom-emacs = {
-        enable = true;
-        doomDir = doomConfigDir;
-        doomLocalDir = "${config.xdg.dataHome}/doom";
-        # Add extra packages that aren't part of Doom but needed for our config
-        extraPackages = epkgs: [
-          epkgs.vterm
-          epkgs.treesit-grammars.with-all-grammars
-        ];
  };
-    })
-  ]);
 }
--- a/home/roles/emacs/doom/packages.el
+++ b/home/roles/emacs/doom/packages.el
@@ -51,21 +51,11 @@

 ;; (package! org-caldav)

-;; Note: Packages with custom recipes must be pinned for nix-doom-emacs-unstraightened
-;; to build deterministically. Update pins when upgrading packages.
-
 (package! gptel :recipe (:nonrecursive t))

 (package! claude-code-ide
-  :recipe (:host github :repo "manzaltu/claude-code-ide.el")
-  :pin "760240d7f03ff16f90ede9d4f4243cd94f3fed73")
+  :recipe (:host github :repo "manzaltu/claude-code-ide.el"))

 (package! gptel-tool-library
  :recipe (:host github :repo "aard-fi/gptel-tool-library"
-           :files ("*.el"))
-  :pin "baffc3b0d74a2b7cbda0d5cd6dd7726d6ccaca83")
-
-(package! beads
-  :recipe (:type git :repo "https://codeberg.org/ctietze/beads.el.git"
-           :files ("lisp/*.el"))
-  :pin "f40a6461d3c0fa0969311bbb6a1e30d1bba86c88")
+           :files ("*.el")))
--- a/machines/wixos/configuration.nix
+++ b/machines/wixos/configuration.nix
@@ -0,0 +1,62 @@
+# Edit this configuration file to define what should be installed on
+# your system. Help is available in the configuration.nix(5) man page, on
+# https://search.nixos.org/options and in the NixOS manual (`nixos-help`).
+
+# NixOS-WSL specific options are documented on the NixOS-WSL repository:
+# https://github.com/nix-community/NixOS-WSL
+
+{ config, lib, pkgs, ... }:
+
+{
+  imports = [
+  ];
+
+  roles = {
+    audio.enable = true;
+    desktop = {
+      enable = true;
+      wayland = true;
+    };
+    users.enable = true;
+  };
+
+  networking.hostName = "wixos";
+
+  wsl.enable = true;
+  wsl.defaultUser = "johno";
+  wsl.startMenuLaunchers = true;
+  wsl.useWindowsDriver = true;
+  wsl.wslConf.network.hostname = "wixos";
+  wsl.wslConf.user.default = "johno";
+
+  services.xserver.videoDrivers = [ "nvidia" ];
+  hardware.graphics = { 
+    enable = true;
+
+    extraPackages = with pkgs; [
+      mesa
+      libvdpau-va-gl
+      libva-vdpau-driver
+    ];
+  };
+  environment.sessionVariables = {
+    LD_LIBRARY_PATH = [
+      "/usr/lib/wsl/lib"
+      "/run/opengl-driver/lib"
+    ];
+  };
+  hardware.nvidia = {
+    modesetting.enable = true;
+    nvidiaSettings = true;
+    open = true;
+    package = config.boot.kernelPackages.nvidiaPackages.latest;
+  };
+
+  # This value determines the NixOS release from which the default
+  # settings for stateful data, like file locations and database versions
+  # on your system were taken. It's perfectly fine and recommended to leave
+  # this value at the release version of the first install of this system.
+  # Before changing this value read the documentation for this option
+  # (e.g. man configuration.nix or on https://nixos.org/nixos/options.html).
+  system.stateVersion = "24.05"; # Did you read the comment?
+}