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bd sync: auto-export

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Steve Yegge
2025-11-05 01:04:36 -08:00
parent 0875e50f85
commit 147ae14c34
1 changed files with 45 additions and 44 deletions
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.beads/beads.jsonl
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@@ -1,9 +1,9 @@
{"id":"bd-0088","content_hash":"7449088a4560a2a2821eeda8dca1e44c0017667314236a13df8d8112cda20101","title":"Create npm package structure for bd-wasm","description":"Set up npm package for distribution:\n- Create package.json with bd-wasm name\n- Bundle bd.wasm + wasm_exec.js\n- Create CLI wrapper (bin/bd) that invokes WASM\n- Add installation scripts if needed\n- Configure package for Claude Code Web sandbox compatibility","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T21:58:07.295058-08:00","updated_at":"2025-11-03T20:56:22.700641-08:00","closed_at":"2025-11-03T20:56:22.700641-08:00","dependencies":[{"issue_id":"bd-0088","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.475356-08:00","created_by":"stevey"}]}
{"id":"bd-02a4","content_hash":"fbaca84d9502239656f05a14f62e8e6adec8f8dd492b1e91694fefcd0bdf310c","title":"Modify CreateIssue to support parent resurrection","description":"Update internal/storage/sqlite/sqlite.go:182-196 to call TryResurrectParent before failing on missing parent. Coordinate with EnsureIDs changes for consistent behavior. Handle edge case where parent never existed in JSONL (fail gracefully).","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:59.701571-08:00","updated_at":"2025-11-04T17:10:48.920499-08:00","closed_at":"2025-11-04T17:10:48.920499-08:00"}
{"id":"bd-02a4","content_hash":"fbaca84d9502239656f05a14f62e8e6adec8f8dd492b1e91694fefcd0bdf310c","title":"Modify CreateIssue to support parent resurrection","description":"Update internal/storage/sqlite/sqlite.go:182-196 to call TryResurrectParent before failing on missing parent. Coordinate with EnsureIDs changes for consistent behavior. Handle edge case where parent never existed in JSONL (fail gracefully).","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:59.701571-08:00","updated_at":"2025-11-05T00:08:42.811436-08:00","closed_at":"2025-11-05T00:08:42.81144-08:00"}
{"id":"bd-0458","content_hash":"c4427da2aec84621525f7f286c626f6c94365a7e6ff8e35e9676b184c85e1adb","title":"Consolidate export/import/commit/push into sync.go","description":"Create internal/daemonrunner/sync.go with Syncer type. Add ExportOnce, ImportOnce, CommitAndMaybePush methods. Replace createExportFunc/createAutoImportFunc with thin closures calling Syncer.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.874539-07:00","updated_at":"2025-11-02T12:32:00.157369-08:00","closed_at":"2025-11-02T12:32:00.157375-08:00"}
{"id":"bd-05a1","content_hash":"b79b0efa41b4eca8d7e5ab9738d5ecaa403c35497877a056a502efe0583ca251","title":"Isolate RPC server startup into rpc_server.go","description":"Create internal/daemonrunner/rpc_server.go with StartRPC function. Move startRPCServer logic here and return typed handle.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.876839-07:00","updated_at":"2025-11-02T12:32:00.158054-08:00","closed_at":"2025-11-02T12:32:00.158057-08:00"}
{"id":"bd-0702","content_hash":"bed8c3ea786ecdbc1867ba5df8b4968894cc49368eaf1ce3238f560fa742cf97","title":"Consolidate ID generation and validation into ids.go","description":"Extract ID logic into ids.go: ValidateIssueIDPrefix, GenerateIssueID, EnsureIDs. Move GetAdaptiveIDLength here. Unify single and bulk ID generation flows.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.877886-07:00","updated_at":"2025-11-02T15:28:11.996618-08:00","closed_at":"2025-11-02T15:28:11.996624-08:00"}
{"id":"bd-08fd","content_hash":"1fc998c05fb1ccb8725bc0fe9b930b201c0c291353b9f9d578c44865eef5dde9","title":"Test child issue","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-02T11:50:40.640901-08:00","updated_at":"2025-11-02T11:50:47.309652-08:00","closed_at":"2025-11-02T11:50:47.309652-08:00","dependencies":[{"issue_id":"bd-08fd","depends_on_id":"bd-ce75","type":"blocks","created_at":"2025-11-02T11:50:40.642073-08:00","created_by":"stevey"}]}
{"id":"bd-08fd","content_hash":"1fc998c05fb1ccb8725bc0fe9b930b201c0c291353b9f9d578c44865eef5dde9","title":"Test child issue","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-02T11:50:40.640901-08:00","updated_at":"2025-11-02T11:50:47.309652-08:00","closed_at":"2025-11-02T11:50:47.309652-08:00"}
{"id":"bd-09b5f2f5","content_hash":"02c69c90dc76c4982976362b9cb00ce01bc3fc3d17618feec3a02bab6fa4d196","title":"Daemon fails to auto-import after git pull updates JSONL","description":"After git pull updates .beads/issues.jsonl, daemon doesn't automatically re-import changes, causing stale data to be shown until next sync cycle (up to 5 minutes).\n\nReproduction:\n1. Repo A: Close issues, export, commit, push\n2. Repo B: git pull (successfully updates .beads/issues.jsonl)\n3. bd show \u003cissue\u003e shows OLD status from daemon's SQLite db\n4. JSONL on disk has correct new status\n\nRoot cause: Daemon sync cycle runs on timer (5min). When user manually runs git pull, daemon doesn't detect JSONL was updated externally and continues serving stale data from SQLite.\n\nImpact:\n- High for AI agents using beads in git workflows\n- Breaks fundamental git-as-source-of-truth model\n- Confusing UX: git log shows commit, bd shows old state\n- Data consistency issues between JSONL and daemon\n\nSee WYVERN_SYNC_ISSUE.md for full analysis.","design":"Three possible solutions:\n\nOption 1: Auto-detect and re-import (recommended)\n- Before serving any bd command, check if .beads/issues.jsonl mtime \u003e last import time\n- If newer, auto-import before processing request\n- Fast check, minimal overhead\n\nOption 2: File watcher in daemon\n- Daemon watches .beads/issues.jsonl for mtime changes\n- Auto-imports when file changes\n- More complex, requires file watching infrastructure\n\nOption 3: Explicit sync command\n- User runs `bd sync` after git pull\n- Manual, error-prone, defeats automation\n\nRecommended: Option 1 (auto-detect) + Option 3 (explicit sync) as fallback.","acceptance_criteria":"1. After git pull updates .beads/issues.jsonl, next bd command sees fresh data\n2. No manual import or daemon restart required\n3. Performance impact \u003c 10ms per command (mtime check is fast)\n4. Works in both daemon and non-daemon modes\n5. Test: Two repo clones, update in one, pull in other, verify immediate sync","notes":"**Fixed in v0.21.2!**\n\nThe daemon auto-import is fully implemented:\n- internal/autoimport package handles staleness detection\n- internal/importer package provides shared import logic (used by both CLI and daemon)\n- daemon's checkAndAutoImportIfStale() calls autoimport.AutoImportIfNewer()\n- importFunc uses importer.ImportIssues() with auto-rename enabled\n- All tests passing\n\nThe critical data corruption bug is FIXED:\n✅ After git pull, daemon detects JSONL is newer (mtime check)\n✅ Daemon auto-imports before serving requests\n✅ No stale data served\n✅ No data loss in multi-agent workflows\n\nVerification needed: Run two-repo test to confirm end-to-end behavior.","status":"closed","priority":0,"issue_type":"epic","created_at":"2025-10-25T23:13:12.270766-07:00","updated_at":"2025-11-01T16:52:50.931197-07:00","closed_at":"2025-11-01T16:52:50.931197-07:00"}
{"id":"bd-0a90","content_hash":"8f19f9a9e01ccf3a4dd42673a84610f2550db9a9e744806105dc3b9e070f4e46","title":"bd show --json doesn't include dependency type field","description":"Fix GitHub issue #202. The JSON output from bd show and bd list commands should include the dependency type field (and optionally created_at, created_by) to match internal storage format and enable better tooling integration.","notes":"PR #203 updated with cleaner implementation: https://github.com/steveyegge/beads/pull/203\n\n## Final Implementation\n\nCleanest possible approach - no internal helper methods needed:\n\n**Design:**\n- `GetDependenciesWithMetadata()` / `GetDependentsWithMetadata()` - canonical implementations with full SQL query\n- `GetDependencies()` / `GetDependents()` - thin wrappers that strip metadata for backward compat\n- `scanIssuesWithDependencyType()` - shared helper for scanning rows with dependency type\n\n**Benefits:**\n- Single source of truth - the `...WithMetadata()` methods ARE the implementation\n- Eliminated ~139 lines of duplicated SQL and scanning code\n- All tests passing (14 dependency-related tests)\n- Backward compatible\n- dependency_type field appears correctly in JSON output\n\n**Note on scan helpers:**\nThe duplication between `scanIssues()` and `scanIssuesWithDependencyType()` is necessary because they handle different SQL result shapes (16 vs 17 columns). This is justified as they serve fundamentally different purposes based on query structure.","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-11-02T09:42:08.712725096Z","updated_at":"2025-11-02T11:50:54.292546-08:00","closed_at":"2025-11-02T11:50:54.292546-08:00","external_ref":"https://github.com/steveyegge/beads/issues/202"}
{"id":"bd-0d9c","content_hash":"a61ba371d6c50f21a92e4debeaaa00a4c3eb77ef96fbcdfa89f80e9b13ffff7a","title":"YABB: Spurious issue updates during normal operations","description":"Issue bd-627d was updated during config refactoring session without any actual changes to it. Only timestamps and content_hash changed.\n\nObserved: Running various bd commands (list, create, etc.) caused bd-627d updated_at to change from 14:14 to 14:31.\n\nExpected: Issues should only be updated when explicitly modified.\n\nThis causes:\n- Dirty JSONL after every session\n- False conflicts in git\n- Confusing git history\n\nLikely culprit: Daemon auto-import/export cycle or database migration touching all issues.","notes":"Investigated thoroughly - unable to reproduce. The import logic has IssueDataChanged() checks before calling UpdateIssue (importer/importer.go:458). All tests pass. May have been fixed by recent refactorings. Closing as cannot reproduce - please reopen with specific repro steps if it occurs again.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-02T14:36:31.023552-08:00","updated_at":"2025-11-02T16:27:39.023535-08:00","closed_at":"2025-11-02T16:27:39.023539-08:00"}
@@ -15,15 +15,15 @@
{"id":"bd-1445","content_hash":"b3272105f48a2b0f11d2cf669d3e7e5c93a5e6c491cbabddf16872966618de0a","title":"Create shared insert/event/dirty helpers","description":"Create issues.go (insertIssue/insertIssues), events.go (recordCreatedEvent/recordCreatedEvents), dirty.go (markDirty/markDirtyBatch). Refactor single and bulk create paths to use these.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.882142-07:00","updated_at":"2025-11-02T15:28:11.99706-08:00","closed_at":"2025-11-02T15:28:11.997063-08:00"}
{"id":"bd-149","content_hash":"4865a0eaf982fedd744f824f990037f40763be2a133e4c3bb4e28971f8372428","title":"Auth tokens expire too quickly","description":"## Summary\n\n[Brief description of the bug]\n\n## Steps to Reproduce\n\n1. Step 1\n2. Step 2\n3. Step 3\n\n## Expected Behavior\n\n[What should happen]\n\n## Actual Behavior\n\n[What actually happens]\n\n## Environment\n\n- OS: [e.g., macOS 15.7.1]\n- Version: [e.g., bd 0.20.1]\n- Additional context: [any relevant details]\n\n## Additional Context\n\n[Screenshots, logs, or other relevant information]\n","design":"## Root Cause Analysis\n\n[Describe the underlying cause once identified]\n\n## Proposed Fix\n\n[Outline the solution approach]\n\n## Impact Assessment\n\n- Affected features: [list]\n- Breaking changes: [yes/no and details]\n- Migration needed: [yes/no and details]\n","acceptance_criteria":"- [ ] Bug no longer reproduces with original steps\n- [ ] Regression tests added\n- [ ] Related edge cases tested\n- [ ] Documentation updated if behavior changed\n","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-03T19:54:10.671488-08:00","updated_at":"2025-11-05T00:25:06.427601-08:00","closed_at":"2025-11-05T00:25:06.427601-08:00","labels":["bug"]}
{"id":"bd-164b","content_hash":"5cddac4d59502d1a6b3999f2dd85e1719389c8f9ea15f3515a62d52049d03645","title":"Add template support for issue creation","description":"Support creating issues from predefined templates to streamline common workflows like epics, bug reports, or feature proposals.\n\nExample usage:\n bd create --from-template epic \"Phase 3 Features\"\n bd create --from-template bug \"Login failure\"\n bd template list\n bd template create epic\n\nTemplates should include:\n- Pre-filled description structure\n- Suggested priority and type\n- Common labels\n- Design/acceptance criteria sections\n\nImplementation notes:\n- Store templates in .beads/templates/ directory\n- Support YAML or JSON format\n- Ship with built-in templates (epic, bug, feature)\n- Allow custom project-specific templates","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-03T18:10:18.985902-08:00","updated_at":"2025-11-03T19:56:41.287303-08:00","closed_at":"2025-11-03T19:56:41.287303-08:00"}
{"id":"bd-197b","content_hash":"0077ab3305b0c5a4b8cc600b1a2f4f30b64a289e4674c3b90110ac537c3f8224","title":"Set up WASM build pipeline","description":"Configure Go→WASM compilation pipeline. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Create build-wasm.sh script (GOOS=js GOARCH=wasm)\n- [ ] Test basic WASM module loading in Node.js\n- [ ] Set up wasm_exec.js wrapper\n- [ ] Add WASM build to CI/CD\n- [ ] Document build process\n\n## Validation\n- bd.wasm compiles successfully\n- Can load in Node.js without errors\n- Bundle size \u003c10MB","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:19.407373-08:00","updated_at":"2025-11-05T00:47:14.359994-08:00","closed_at":"2025-11-05T00:47:14.359998-08:00","dependencies":[{"issue_id":"bd-197b","depends_on_id":"bd-44d0","type":"blocks","created_at":"2025-11-02T18:33:19.407904-08:00","created_by":"daemon"}]}
{"id":"bd-197b","content_hash":"0077ab3305b0c5a4b8cc600b1a2f4f30b64a289e4674c3b90110ac537c3f8224","title":"Set up WASM build pipeline","description":"Configure Go→WASM compilation pipeline. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Create build-wasm.sh script (GOOS=js GOARCH=wasm)\n- [ ] Test basic WASM module loading in Node.js\n- [ ] Set up wasm_exec.js wrapper\n- [ ] Add WASM build to CI/CD\n- [ ] Document build process\n\n## Validation\n- bd.wasm compiles successfully\n- Can load in Node.js without errors\n- Bundle size \u003c10MB","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:19.407373-08:00","updated_at":"2025-11-05T00:55:48.755936-08:00","closed_at":"2025-11-05T00:55:48.755941-08:00","dependencies":[{"issue_id":"bd-197b","depends_on_id":"bd-44d0","type":"blocks","created_at":"2025-11-02T18:33:19.407904-08:00","created_by":"daemon"}]}
{"id":"bd-1b0a","content_hash":"57d0a0ca69b2c95554ed7afa95c366187f0a9b53beebe2391b7aa49a3436f470","title":"Add transaction helper to replace manual COMMIT/ROLLBACK","description":"Create tx.go with withTx helper that handles transaction lifecycle. Replace manual transaction blocks in create/insert/update paths.","notes":"Refactoring complete:\n- Created withTx() helper in util.go\n- Added ExecInTransaction() as deprecated wrapper for backward compatibility\n- Refactored all manual transaction blocks to use withTx():\n - events.go: AddComment\n - dirty.go: MarkIssuesDirty, ClearDirtyIssuesByID\n - labels.go: executeLabelOperation\n - dependencies.go: AddDependency, RemoveDependency\n - compact.go: ApplyCompaction\n- All tests pass successfully","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.823323-07:00","updated_at":"2025-11-02T12:41:45.827688-08:00","closed_at":"2025-11-02T12:41:45.827688-08:00"}
{"id":"bd-1c63eb84","content_hash":"178adb74f06c9a049ec5db6c406253005ee3460e7b732801e60fcee044986004","title":"Investigate jujutsu integration for beads","description":"Research and document how beads could integrate with jujutsu (jj), the next-generation VCS. Key areas to explore:\n- How jj's operation model differs from git (immutable operations, working-copy-as-commit)\n- JSONL sync strategy with jj's conflict resolution model\n- Daemon compatibility with jj's more frequent rewrites\n- Whether auto-import/export needs changes for jj workflows\n- Example configurations and documentation updates needed","status":"open","priority":3,"issue_type":"task","created_at":"2025-10-23T09:23:23.582009-07:00","updated_at":"2025-10-30T17:12:58.177733-07:00"}
{"id":"bd-1c77","content_hash":"49c554748a8f61dc99eb6a942c620f5856f4c0d240678022f6ae998a102d591e","title":"Implement filesystem shims for WASM","description":"WASM needs JS shims for filesystem access. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Implement file read/write shims\n- [ ] Map WASM syscalls to Node.js fs API\n- [ ] Handle .beads/ directory discovery\n- [ ] Test with real JSONL files\n- [ ] Support both absolute and relative paths\n\n## Technical Notes\n- Use Node.js fs module via syscall/js\n- Consider MEMFS for in-memory option","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.280464-08:00","updated_at":"2025-11-05T00:47:14.360407-08:00","closed_at":"2025-11-05T00:47:14.36041-08:00","dependencies":[{"issue_id":"bd-1c77","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.281134-08:00","created_by":"daemon"}]}
{"id":"bd-1c77","content_hash":"49c554748a8f61dc99eb6a942c620f5856f4c0d240678022f6ae998a102d591e","title":"Implement filesystem shims for WASM","description":"WASM needs JS shims for filesystem access. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Implement file read/write shims\n- [ ] Map WASM syscalls to Node.js fs API\n- [ ] Handle .beads/ directory discovery\n- [ ] Test with real JSONL files\n- [ ] Support both absolute and relative paths\n\n## Technical Notes\n- Use Node.js fs module via syscall/js\n- Consider MEMFS for in-memory option","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.280464-08:00","updated_at":"2025-11-05T00:55:48.756428-08:00","closed_at":"2025-11-05T00:55:48.756432-08:00","dependencies":[{"issue_id":"bd-1c77","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.281134-08:00","created_by":"daemon"}]}
{"id":"bd-1f28","content_hash":"850a14659d6747dc114b7da94e55c3f9594995cabc31c3c85e3089fbd5f61712","title":"Extract migration functions to migrations.go","description":"Move migrateDirtyIssuesTable, migrateExternalRefColumn, migrateCompositeIndexes, migrateClosedAtConstraint, migrateCompactionColumns, migrateSnapshotsTable, migrateCompactionConfig, migrateCompactedAtCommitColumn, migrateExportHashesTable, migrateContentHashColumn to a separate migrations.go file","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T19:28:54.892045-07:00","updated_at":"2025-11-01T20:00:09.038174-07:00","closed_at":"2025-11-01T20:00:09.038178-07:00"}
{"id":"bd-1f64","content_hash":"80f404d7c0f06c7f4bc6d52ac02c1a002a95ac7cb60c6485b2ceed5e013dad75","title":"Add comprehensive tests for config.yaml issue-prefix migration","description":"The GH #209 config.yaml migration lacks test coverage:\n\nMissing tests:\n- config.SetIssuePrefix() edge cases (empty file, comments, malformed YAML)\n- config.GetIssuePrefix() with various config states\n- MigrateConfigToYAML() automatic migration logic\n- bd init writing to config.yaml instead of DB\n- bd migrate DB→config.yaml migration path\n\nTest scenarios needed:\n1. SetIssuePrefix with empty config.yaml\n2. SetIssuePrefix with existing config.yaml (preserves other settings)\n3. SetIssuePrefix with commented issue-prefix line\n4. SetIssuePrefix atomic write (temp file cleanup)\n5. GetIssuePrefix fallback behavior\n6. MigrateConfigToYAML when config.yaml missing prefix but DB has it\n7. MigrateConfigToYAML when both missing (detect from issues)\n8. MigrateConfigToYAML when config.yaml already has prefix (no-op)\n9. Integration test: fresh bd init writes to config.yaml only\n10. Integration test: upgrade from v0.21 DB migrates to config.yaml\n\nPriority 1 because this is a user-facing migration affecting all users upgrading to v0.22.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-03T22:33:43.08753-08:00","updated_at":"2025-11-03T22:46:16.306565-08:00","closed_at":"2025-11-03T22:46:16.306565-08:00"}
{"id":"bd-1ls","content_hash":"af79708476d560abaac3cbe9c537bcf43c2100dcb1d676954ea604486f75d199","title":"Override test","description":"## Overview\n\n[Describe the high-level goal and scope of this epic]\n\n## Success Criteria\n\n- [ ] Criteria 1\n- [ ] Criteria 2\n- [ ] Criteria 3\n\n## Background\n\n[Provide context and motivation]\n\n## Scope\n\n**In Scope:**\n- Item 1\n- Item 2\n\n**Out of Scope:**\n- Item 1\n- Item 2\n","design":"## Architecture\n\n[Describe the overall architecture and approach]\n\n## Components\n\n- Component 1: [description]\n- Component 2: [description]\n\n## Dependencies\n\n[List external dependencies or constraints]\n","acceptance_criteria":"- [ ] All child issues are completed\n- [ ] Integration tests pass\n- [ ] Documentation is updated\n- [ ] Code review completed\n","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-03T20:15:10.01471-08:00","updated_at":"2025-11-03T22:07:10.946574-08:00","closed_at":"2025-11-03T22:07:10.946574-08:00","labels":["epic"]}
{"id":"bd-1vv","content_hash":"1db907ddb55edaf7a4c06a566c4e1b8244fcd9ba5d7e2fca4d5c053e424ac515","title":"Add WebSocket support","description":"## Feature Request\n\n[Describe the desired feature]\n\n## Motivation\n\n[Why is this feature needed? What problem does it solve?]\n\n## Use Cases\n\n1. **Use Case 1**: [description]\n2. **Use Case 2**: [description]\n\n## Proposed Solution\n\n[High-level approach to implementing this feature]\n\n## Alternatives Considered\n\n- **Alternative 1**: [description and why not chosen]\n- **Alternative 2**: [description and why not chosen]\n","design":"## Technical Design\n\n[Detailed technical approach]\n\n## API Changes\n\n[New commands, flags, or APIs]\n\n## Data Model Changes\n\n[Database schema changes if any]\n\n## Implementation Notes\n\n- Note 1\n- Note 2\n\n## Testing Strategy\n\n- Unit tests: [scope]\n- Integration tests: [scope]\n- Manual testing: [steps]\n","acceptance_criteria":"- [ ] Feature implements all described use cases\n- [ ] All tests pass\n- [ ] Documentation updated (README, commands)\n- [ ] Examples added if applicable\n- [ ] No performance regressions\n","status":"open","priority":2,"issue_type":"feature","created_at":"2025-11-03T19:56:41.271215-08:00","updated_at":"2025-11-03T19:56:41.271215-08:00","labels":["feature"]}
{"id":"bd-1yi5","content_hash":"11044802d32a77f8ca574ca5902939bcc7e252880437bea7281aaf445db8db84","title":"Use -short flag in CI for PR checks","description":"Update CI configuration to use -short flag for PR checks, run full tests nightly.\n\nThe slow tests already support testing.Short() and will be skipped.\n\nExpected savings: ~20 seconds for PR checks (fast tests only)\n\nImplementation:\n- Update .github/workflows/ci.yml to add -short flag for PR tests\n- Create/update nightly workflow for full test runs\n- Update README/docs about test strategy\n\nFile: .github/workflows/ci.yml:30","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T01:24:17.279618-08:00","updated_at":"2025-11-04T10:25:10.616119-08:00","closed_at":"2025-11-04T10:25:10.616119-08:00","dependencies":[{"issue_id":"bd-1yi5","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:17.280453-08:00","created_by":"daemon"}]}
{"id":"bd-1yi5","content_hash":"f79a57405ce5e0b0a2edba770937fb86df0b955b568bc066e0673845e33e40d5","title":"Use -short flag in CI for PR checks","description":"Update CI configuration to use -short flag for PR checks, run full tests nightly.\n\nThe slow tests already support testing.Short() and will be skipped.\n\nExpected savings: ~20 seconds for PR checks (fast tests only)\n\nImplementation:\n- Update .github/workflows/ci.yml to add -short flag for PR tests\n- Create/update nightly workflow for full test runs\n- Update README/docs about test strategy\n\nFile: .github/workflows/ci.yml:30","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T01:24:17.279618-08:00","updated_at":"2025-11-04T10:25:10.616119-08:00","closed_at":"2025-11-04T10:25:10.616119-08:00","dependencies":[{"issue_id":"bd-1yi5","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:17.280453-08:00","created_by":"daemon"}]}
{"id":"bd-23a8","content_hash":"7c54bea4624429ff0842a192489979e0a1eafdd872027a0934b1a1d9b0e80d33","title":"Test simple issue","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T17:11:04.464726-08:00","updated_at":"2025-11-04T11:10:23.529727-08:00","closed_at":"2025-11-04T11:10:23.529731-08:00"}
{"id":"bd-248bdc3e","content_hash":"8eaeb2dbef1ed6b25fc1bcf3bc5cd1b38a5cf5a487772558ba9fe12a149978f3","title":"Add optional post-merge git hook example for bd sync","description":"Create example git hook that auto-runs bd sync after git pull/merge.\n\nAdd to examples/git-hooks/:\n- post-merge hook that checks if .beads/issues.jsonl changed\n- If changed: run `bd sync` automatically\n- Make it optional/documented (not auto-installed)\n\nBenefits:\n- Zero-friction sync after git pull\n- Complements auto-detection as belt-and-suspenders\n\nNote: post-merge hook already exists for pre-commit/post-merge. Extend it to support sync.","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-25T22:47:14.668842-07:00","updated_at":"2025-10-30T17:12:58.218887-07:00"}
{"id":"bd-2530","content_hash":"ac8bc0c4d75082ac76200d092b3c1c476fd1523c9e83b890f829ee3dd7dcbb3d","title":"Issue with labels","description":"This is a description","design":"Use MVC pattern","acceptance_criteria":"All tests pass","status":"closed","priority":0,"issue_type":"feature","created_at":"2025-10-31T21:40:34.630173-07:00","updated_at":"2025-11-01T11:11:57.93151-07:00","closed_at":"2025-11-01T11:11:57.93151-07:00","labels":["bug","critical"]}
@@ -39,14 +39,14 @@
{"id":"bd-2b34.7","content_hash":"64f698aef173b6ff3b70021be35c423aa14c853b2ef36a30e6ab41099e4b29c3","title":"Add tests for daemon config module","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-31T22:28:42.373684-07:00","updated_at":"2025-11-01T21:21:42.431252-07:00","closed_at":"2025-11-01T21:21:42.431252-07:00"}
{"id":"bd-2b34.8","content_hash":"1a859e1791613917defac65bf2632904f5cc79017ad7aa83323027fd54fbd541","title":"Extract daemon lifecycle functions to daemon_lifecycle.go","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-31T22:28:42.382892-07:00","updated_at":"2025-11-01T21:02:58.350055-07:00","closed_at":"2025-11-01T21:02:58.350055-07:00"}
{"id":"bd-2e80","content_hash":"bb7de865be3d63a2c6c167cf1100a458bfcc4d04d85639bcbcf22f310477e408","title":"Document shared memory test isolation pattern in test_helpers.go","description":"Tests were failing because :memory: creates a shared database across all tests. The fix is to use \"file::memory:?mode=memory\u0026cache=private\" for test isolation.\n\nShould document this pattern in test_helpers.go and potentially update newTestStore to use private memory by default.","status":"closed","priority":3,"issue_type":"chore","created_at":"2025-11-01T22:40:58.993496-07:00","updated_at":"2025-11-02T16:27:39.02423-08:00","closed_at":"2025-11-02T16:27:39.024233-08:00"}
{"id":"bd-307","content_hash":"6c1bda0d392414f4bb16f078a18f3958a869d3d1ed72bde6cc9012739eae88ef","title":"Multi-repo hydration layer","description":"Build core infrastructure to hydrate database from N repos (N≥1), with smart caching via file mtime tracking and routing writes to correct JSONL based on source_repo metadata.","design":"Components:\n- Config schema for repos.additional\n- source_repo metadata field (which repo owns each issue)\n- Hydration logic (read from N JSONLs)\n- Write routing (write to correct JSONL)\n- Smart caching (file mtime tracking to avoid re-parsing)\n- SQLite DB as cache layer","acceptance_criteria":"1. Can configure N repos via config.toml\n2. Database hydrates from all configured repos\n3. Writes route to correct JSONL via source_repo\n4. File mtime caching prevents re-parsing unchanged JSONLs\n5. Query performance \u003c100ms even with 5-10 polling interval\n6. N=1 (single repo) works unchanged","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:30.655765-08:00","updated_at":"2025-11-05T00:08:38.196438-08:00","closed_at":"2025-11-05T00:08:38.196443-08:00","dependencies":[{"issue_id":"bd-307","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:21.823652-08:00","created_by":"daemon"}]}
{"id":"bd-307","content_hash":"6c1bda0d392414f4bb16f078a18f3958a869d3d1ed72bde6cc9012739eae88ef","title":"Multi-repo hydration layer","description":"Build core infrastructure to hydrate database from N repos (N≥1), with smart caching via file mtime tracking and routing writes to correct JSONL based on source_repo metadata.","design":"Components:\n- Config schema for repos.additional\n- source_repo metadata field (which repo owns each issue)\n- Hydration logic (read from N JSONLs)\n- Write routing (write to correct JSONL)\n- Smart caching (file mtime tracking to avoid re-parsing)\n- SQLite DB as cache layer","acceptance_criteria":"1. Can configure N repos via config.toml\n2. Database hydrates from all configured repos\n3. Writes route to correct JSONL via source_repo\n4. File mtime caching prevents re-parsing unchanged JSONLs\n5. Query performance \u003c100ms even with 5-10 polling interval\n6. N=1 (single repo) works unchanged","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:30.655765-08:00","updated_at":"2025-11-05T00:08:42.811877-08:00","closed_at":"2025-11-05T00:08:42.811879-08:00","dependencies":[{"issue_id":"bd-307","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:21.823652-08:00","created_by":"daemon"}]}
{"id":"bd-3396","content_hash":"43addfac9a43239dd75e1292a6502a79479cb09e67ff5d6823cc3df1b73390bf","title":"Add merge helper commands (bd sync --merge)","description":"Add commands to merge beads branch back to main.\n\nTasks:\n- Implement bd sync --merge command\n- Implement bd sync --status command\n- Implement bd sync --auto-merge (optional, for automation)\n- Detect merge conflicts and provide guidance\n- Show commit diff between branches\n- Verify main branch is clean before merge\n- Push merged changes to remote\n\nEstimated effort: 2-3 days","acceptance_criteria":"- bd sync --merge successfully merges beads branch\n- Conflicts detected with helpful error message\n- bd sync --status shows clear diff\n- Works with protected main (user must have push access)\n- Git history is clean (no unnecessary merge commits)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.580873-08:00","updated_at":"2025-11-02T17:12:34.620481-08:00","closed_at":"2025-11-02T17:12:34.620486-08:00","dependencies":[{"issue_id":"bd-3396","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.376916-08:00","created_by":"stevey"}]}
{"id":"bd-3433","content_hash":"008abd738af658ad14ed991c069e15264239a1aa08804c694c93b4c214223f99","title":"Implement topological sort for import ordering","description":"Refactor upsertIssues() to sort issues by hierarchy depth before batch creation. Ensures parents are created before children, fixing latent bug where parent-child pairs in same batch can fail if ordered wrong. Sort by dot count, create in depth-order batches (0→1→2→3).","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:42.22005-08:00","updated_at":"2025-11-04T17:11:40.564403-08:00","closed_at":"2025-11-04T17:11:40.564403-08:00"}
{"id":"bd-3433","content_hash":"008abd738af658ad14ed991c069e15264239a1aa08804c694c93b4c214223f99","title":"Implement topological sort for import ordering","description":"Refactor upsertIssues() to sort issues by hierarchy depth before batch creation. Ensures parents are created before children, fixing latent bug where parent-child pairs in same batch can fail if ordered wrong. Sort by dot count, create in depth-order batches (0→1→2→3).","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:42.22005-08:00","updated_at":"2025-11-05T00:08:42.812154-08:00","closed_at":"2025-11-05T00:08:42.812156-08:00"}
{"id":"bd-35c7","content_hash":"28e00b560e08ecbf061e998836f8a1dd11392680b273589341c13e6b267df37c","title":"Add label-based filtering to bd ready command","description":"Allow filtering ready work by labels to help organize work by sprint, week, or category.\n\nExample usage:\n bd ready --label week1-2\n bd ready --label frontend,high-priority\n\nThis helps teams organize work into batches and makes it easier for agents to focus on specific categories of work.\n\nImplementation notes:\n- Add --label flag to ready command\n- Support comma-separated labels (AND logic)\n- Should work with existing ready work logic (unblocked issues)","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-03T18:10:18.976536-08:00","updated_at":"2025-11-03T22:27:30.614911-08:00","closed_at":"2025-11-03T22:27:30.614911-08:00"}
{"id":"bd-363f","content_hash":"ac5d74a93d0eebb70f9a2eaed4ed637a90be138c75e5d9ceef066165233549be","title":"Document bd-wasm installation and usage","description":"Create documentation for bd-wasm:\n- Update README with npm installation instructions\n- Add troubleshooting section for WASM-specific issues\n- Document known limitations vs native bd\n- Add examples for Claude Code Web sandbox usage\n- Update INSTALLING.md with bd-wasm option","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T21:58:07.305711-08:00","updated_at":"2025-11-05T00:47:14.360709-08:00","closed_at":"2025-11-05T00:47:14.360712-08:00","dependencies":[{"issue_id":"bd-363f","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.530675-08:00","created_by":"stevey"}]}
{"id":"bd-363f","content_hash":"ac5d74a93d0eebb70f9a2eaed4ed637a90be138c75e5d9ceef066165233549be","title":"Document bd-wasm installation and usage","description":"Create documentation for bd-wasm:\n- Update README with npm installation instructions\n- Add troubleshooting section for WASM-specific issues\n- Document known limitations vs native bd\n- Add examples for Claude Code Web sandbox usage\n- Update INSTALLING.md with bd-wasm option","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T21:58:07.305711-08:00","updated_at":"2025-11-05T00:55:48.756684-08:00","closed_at":"2025-11-05T00:55:48.756687-08:00","dependencies":[{"issue_id":"bd-363f","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.530675-08:00","created_by":"stevey"}]}
{"id":"bd-36870264","content_hash":"d85eac459267257453cd22af0ab79babb86a26b7380584d0625c12a5302e7eb1","title":"Enforce daemon singleton per workspace with file locking","description":"Agent in ~/src/wyvern discovered 4 simultaneous daemon processes running, causing infinite directory recursion (.beads/.beads/.beads/...). Each daemon used relative paths and created nested .beads/ directories.\n\nRoot cause: No singleton enforcement. Multiple `bd daemon` processes can start in same workspace.\n\nExpected: One daemon per workspace (each workspace = separate .beads/ dir with bd.sock)\nActual: Multiple daemons can run simultaneously in same workspace\n\nNote: Separate git clones = separate workspaces = separate daemons (correct). Git worktrees share .beads/ and have known limitations (documented, use --no-daemon).","design":"Use flock (file locking) on daemon socket or database file to enforce singleton:\n\n1. On daemon start, attempt exclusive lock on .beads/bd.sock or .beads/daemon.lock\n2. If lock held by another process, refuse to start (exit with clear error)\n3. Hold lock for lifetime of daemon process\n4. Release lock on daemon shutdown\n\nAlternative: Use PID file with stale detection (check if PID is still running)\n\nImplementation location: Daemon startup code in cmd/bd/ or internal/daemon/","acceptance_criteria":"1. Starting second daemon process in same workspace fails with clear error\n2. Test: Start daemon, attempt second start, verify failure\n3. Killing daemon releases lock, allowing new daemon to start\n4. No infinite .beads/ directory recursion possible\n5. Works correctly with auto-start mechanism","notes":"## Fix Summary\n\nSuccessfully prevented the nested .beads/.beads/ recursion bug by implementing two safeguards:\n\n1. **Path Canonicalization in FindDatabasePath()** (beads.go):\n - Added filepath.Abs() + filepath.EvalSymlinks() to normalize all database paths\n - Prevents relative path edge cases that create nested directories\n - Ensures all daemons see the same canonical path\n\n2. **Nested Directory Detection** (daemon_lifecycle.go):\n - Added explicit check for \".beads/.beads\" pattern in setupDaemonLock()\n - Fails fast with clear error message if nested structure detected\n - Provides user hints about proper usage\n\n## Root Cause\n\nThe daemon lock (added Oct 22, 2025) correctly prevents simultaneous daemons in the SAME workspace. However, when BEADS_DB used a relative path (e.g., \".beads/beads.db\") from inside the .beads directory, FindDatabasePath() would resolve it to a nested path creating a separate workspace:\n- First daemon: /workspace/.beads/beads.db\n- Second daemon from .beads/: /workspace/.beads/.beads/beads.db ← Different lock file!\n\n## Testing\n\nAll acceptance criteria passed:\n✅ 1. Second daemon start fails with \"daemon already running\" error\n✅ 2. Killing daemon releases lock, new daemon can start \n✅ 3. No infinite .beads/ recursion possible (tested nested BEADS_DB path)\n✅ 4. Works with auto-start mechanism\n\nThe fix addresses the edge case while maintaining the existing lock mechanism's correctness.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-10-25T23:13:12.269549-07:00","updated_at":"2025-11-01T19:46:06.230339-07:00","closed_at":"2025-11-01T19:46:06.230339-07:00"}
{"id":"bd-374e","content_hash":"468235095d0f60303f97d0c681d8ff390e3616731664853fab4afe55f4c1e1a3","title":"WASM integration testing","description":"Comprehensive testing of WASM build. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Unit tests for WASM module\n- [ ] Integration tests with real JSONL files\n- [ ] Test all bd commands for parity\n- [ ] Performance benchmarks\n- [ ] Test in actual Claude Code Web sandbox\n- [ ] Document any limitations\n\n## Test Coverage Target\n- \u003e90% of bd CLI commands work identically","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.342184-08:00","updated_at":"2025-11-05T00:47:14.361044-08:00","closed_at":"2025-11-05T00:47:14.361046-08:00","dependencies":[{"issue_id":"bd-374e","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.342928-08:00","created_by":"daemon"}]}
{"id":"bd-37dd","content_hash":"cd19e661a3d2b923145dd61e7f1f07bdc6bf93136967fd2543b48b3a8b4134e1","title":"Add topological sort utility functions","description":"Create internal/importer/sort.go with utilities for depth-based sorting of issues. Functions: GetHierarchyDepth(id), SortByDepth(issues), GroupByDepth(issues). Include stable sorting for same-depth issues.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:31:42.309207-08:00","updated_at":"2025-11-05T00:08:38.196926-08:00","closed_at":"2025-11-05T00:08:38.196929-08:00"}
{"id":"bd-374e","content_hash":"468235095d0f60303f97d0c681d8ff390e3616731664853fab4afe55f4c1e1a3","title":"WASM integration testing","description":"Comprehensive testing of WASM build. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Unit tests for WASM module\n- [ ] Integration tests with real JSONL files\n- [ ] Test all bd commands for parity\n- [ ] Performance benchmarks\n- [ ] Test in actual Claude Code Web sandbox\n- [ ] Document any limitations\n\n## Test Coverage Target\n- \u003e90% of bd CLI commands work identically","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.342184-08:00","updated_at":"2025-11-05T00:55:48.756994-08:00","closed_at":"2025-11-05T00:55:48.756996-08:00","dependencies":[{"issue_id":"bd-374e","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.342928-08:00","created_by":"daemon"}]}
{"id":"bd-37dd","content_hash":"cd19e661a3d2b923145dd61e7f1f07bdc6bf93136967fd2543b48b3a8b4134e1","title":"Add topological sort utility functions","description":"Create internal/importer/sort.go with utilities for depth-based sorting of issues. Functions: GetHierarchyDepth(id), SortByDepth(issues), GroupByDepth(issues). Include stable sorting for same-depth issues.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:31:42.309207-08:00","updated_at":"2025-11-05T00:08:42.812378-08:00","closed_at":"2025-11-05T00:08:42.81238-08:00"}
{"id":"bd-3852","content_hash":"bc2640e4d1c60e0b7a7c3b6d49cb05292f50facb5d4ea3887ba8c414aa7ffef3","title":"Add orphan detection migration","description":"Create migration to detect orphaned children in existing databases. Query: SELECT id FROM issues WHERE id LIKE '%.%' AND substr(id, 1, instr(id || '.', '.') - 1) NOT IN (SELECT id FROM issues). Log results, let user decide action (delete orphans or convert to top-level).","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-04T12:32:30.727044-08:00","updated_at":"2025-11-04T12:32:30.727044-08:00"}
{"id":"bd-3b2fe268","content_hash":"60b24230230cb6c49c45d7439787ee8a748164dfc9629946653814d447ea8c1a","title":"Add fsnotify dependency to go.mod","description":"","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-28T16:20:02.429763-07:00","updated_at":"2025-10-31T20:36:49.310833-07:00"}
{"id":"bd-3b7f","content_hash":"24c22ea6863edee2b6269e178a9966e68295baa265595b4ba813b68fc67020ac","title":"Add tests for extracted modules","description":"Create tests for migrations.go, hash_ids.go, batch_ops.go, and validators.go","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T19:28:54.88933-07:00","updated_at":"2025-11-01T23:00:37.751004-07:00","closed_at":"2025-11-01T23:00:37.751004-07:00"}
@@ -57,18 +57,18 @@
{"id":"bd-4462","content_hash":"a3f7ca75994ca4efb8b5b6ae47ecf5b8544ad33510e4c6f72663efd8c2737f74","title":"Test basic bd commands in WASM (init, create, list)","description":"Compile and verify basic bd functionality works in WASM:\n- Test bd init --quiet\n- Test bd create with simple issue\n- Test bd list --json output\n- Verify SQLite database creation and queries work\n- Document any runtime issues or workarounds needed","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T21:58:07.291771-08:00","updated_at":"2025-11-02T23:07:10.273212-08:00","closed_at":"2025-11-02T23:07:10.273212-08:00","dependencies":[{"issue_id":"bd-4462","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.448668-08:00","created_by":"stevey"},{"issue_id":"bd-4462","depends_on_id":"bd-b4b0","type":"blocks","created_at":"2025-11-02T22:23:55.596771-08:00","created_by":"stevey"}]}
{"id":"bd-44d0","content_hash":"a20f23c823907e546f852c1bbb0c09166100b2569d4a1192f0a7288ee5d918e8","title":"WASM port of bd for Claude Code Web sandboxes","description":"Enable beads to work in Claude Code Web sandboxes by compiling bd to WebAssembly.\n\n## Problem\nClaude Code Web sandboxes cannot install bd CLI due to network restrictions:\n- GitHub releases return 403\n- go install fails with DNS errors\n- Binary cannot be downloaded\n\n## Solution\nCompile bd Go codebase to WASM, publish to npm as drop-in replacement.\n\n## Technical Approach\n- Use GOOS=js GOARCH=wasm to compile bd\n- modernc.org/sqlite already supports js/wasm target\n- Publish to npm as bd-wasm package\n- Full feature parity with bd CLI\n\n## Success Criteria\n- bd-wasm installs via npm in web sandbox\n- All core bd commands work identically\n- JSONL output matches native bd\n- Performance within 2x of native","notes":"WASM port abandoned - Claude Code Web has full VMs not browser restrictions. Better: npm + native binary","status":"closed","priority":0,"issue_type":"epic","created_at":"2025-11-02T18:32:27.660794-08:00","updated_at":"2025-11-02T23:36:38.679515-08:00","closed_at":"2025-11-02T23:36:38.679515-08:00"}
{"id":"bd-4c18","content_hash":"d3d162cefdf9f3637ffb0ead341f48ffefe50fdf5e6ff9edc3ffcd05cdd703b4","title":"bd delete fails to find closed issues","description":"## Steps to Reproduce\n1. Close some issues with `bd close`\n2. Try to delete them with `bd delete \u003cids\u003e --force`\n3. Get error \"issues not found\"\n\n## Expected Behavior\nShould delete the closed issues\n\n## Actual Behavior\n```\nError: issues not found: bd-74ee, bd-9b13, bd-72w, bd-149, bd-5iv, bd-78w\n```\n\nBut `bd list --status closed --json` shows they exist.\n\n## Root Cause\nLikely the delete command is only looking for open issues, or there's a race condition with auto-import.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-03T20:57:31.763179-08:00","updated_at":"2025-11-03T21:31:18.677629-08:00","closed_at":"2025-11-03T21:31:18.677629-08:00"}
{"id":"bd-4d80b7b1","content_hash":"dcd2f1ab989ee30b9608a905775030ce7366e47e5dfb24808f9ebdc058027c65","title":"Investigate and upgrade to modernc.org/sqlite 1.39.1+","description":"We had to pin modernc.org/sqlite to v1.38.2 due to a FOREIGN KEY constraint regression in v1.39.1 (SQLite 3.50.4).\n\n**Issue:** [deleted:bd-cb64c226.2], GH #144\n\n**Symptom:** CloseIssue fails with \"FOREIGN KEY constraint failed (787)\" when called via MCP/daemon, but works fine via CLI.\n\n**Root Cause:** Unknown - likely stricter FK enforcement in SQLite 3.50.4 or modernc.org wrapper changes.\n\n**Workaround:** Pinned to v1.38.2 (SQLite 3.49.x)\n\n**TODO:**\n1. Monitor modernc.org/sqlite releases for fixes\n2. Check SQLite 3.50.5+ changelogs for FK-related fixes\n3. Investigate why daemon mode fails but CLI succeeds (connection reuse? transaction isolation?)\n4. Consider filing upstream issue with reproducible test case\n5. Upgrade when safe","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-24T11:49:12.836292-07:00","updated_at":"2025-10-30T17:12:58.211344-07:00"}
{"id":"bd-4d80b7b1","content_hash":"0cad3e22d722ff045a29f218962fb00bd8265a1cfc82c5b70f29ffe1a40e4088","title":"Investigate and upgrade to modernc.org/sqlite 1.39.1+","description":"We had to pin modernc.org/sqlite to v1.38.2 due to a FOREIGN KEY constraint regression in v1.39.1 (SQLite 3.50.4).\n\n**Issue:** [deleted:bd-cb64c226.2], GH #144\n\n**Symptom:** CloseIssue fails with \"FOREIGN KEY constraint failed (787)\" when called via MCP/daemon, but works fine via CLI.\n\n**Root Cause:** Unknown - likely stricter FK enforcement in SQLite 3.50.4 or modernc.org wrapper changes.\n\n**Workaround:** Pinned to v1.38.2 (SQLite 3.49.x)\n\n**TODO:**\n1. Monitor modernc.org/sqlite releases for fixes\n2. Check SQLite 3.50.5+ changelogs for FK-related fixes\n3. Investigate why daemon mode fails but CLI succeeds (connection reuse? transaction isolation?)\n4. Consider filing upstream issue with reproducible test case\n5. Upgrade when safe","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-24T11:49:12.836292-07:00","updated_at":"2025-10-30T17:12:58.211344-07:00"}
{"id":"bd-4ff2","content_hash":"9a36dc265788b61d5a45ab75633951f4f653b1130c1a003a66829fd28555488e","title":"Fix CI failures before 0.21.3 release","description":"CI is failing on multiple jobs:\n1. Nix flake: Tests fail due to missing git in build environment\n2. Windows tests: Need to check what's failing\n3. Linux tests: Need to check what's failing\n4. Linter errors: Many unchecked errors need fixing\n\nNeed to fix before tagging v0.21.3 release.","notes":"Fixed linter errors (errcheck, misspell), Nix flake git dependency, and import database discovery bug. Tests still failing - need to investigate further.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-01T23:52:09.244763-07:00","updated_at":"2025-11-02T12:32:57.748324-08:00","closed_at":"2025-11-02T12:32:57.748329-08:00"}
{"id":"bd-4ms","content_hash":"940d9a34e84ac71d4b2ab61a4608f5e4e54b8793c6ffc759ebc5d22e9eff26bc","title":"Multi-repo contributor workflow support","description":"Implement separate repository support for OSS contributors to prevent PR pollution while maintaining git ledger and multi-clone sync. Based on contributor-workflow-analysis.md Solution #4.","design":"See docs/contributor-workflow-analysis.md for complete design rationale.\n\nKey architecture:\n- N ≥ 1 repos (single repo default, multi-repo opt-in)\n- VCS-agnostic (git, jj, hg, sapling)\n- Config-based routing (no schema changes)\n- Smart caching (file mtime tracking, SQLite cache)\n- Global namespace (hash-based IDs)\n- Cross-repo dependencies supported","acceptance_criteria":"1. Zero PR pollution - contributor planning never reaches upstream\n2. Git ledger preserved - all repos VCS-tracked\n3. Backward compatible - existing single-repo workflows unchanged\n4. Sub-second query performance with polling\n5. Library API stable - transparent to downstream consumers like VC","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:19.515776-08:00","updated_at":"2025-11-05T00:08:38.197185-08:00","closed_at":"2025-11-05T00:08:38.197187-08:00"}
{"id":"bd-4ms","content_hash":"940d9a34e84ac71d4b2ab61a4608f5e4e54b8793c6ffc759ebc5d22e9eff26bc","title":"Multi-repo contributor workflow support","description":"Implement separate repository support for OSS contributors to prevent PR pollution while maintaining git ledger and multi-clone sync. Based on contributor-workflow-analysis.md Solution #4.","design":"See docs/contributor-workflow-analysis.md for complete design rationale.\n\nKey architecture:\n- N ≥ 1 repos (single repo default, multi-repo opt-in)\n- VCS-agnostic (git, jj, hg, sapling)\n- Config-based routing (no schema changes)\n- Smart caching (file mtime tracking, SQLite cache)\n- Global namespace (hash-based IDs)\n- Cross-repo dependencies supported","acceptance_criteria":"1. Zero PR pollution - contributor planning never reaches upstream\n2. Git ledger preserved - all repos VCS-tracked\n3. Backward compatible - existing single-repo workflows unchanged\n4. Sub-second query performance with polling\n5. Library API stable - transparent to downstream consumers like VC","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:19.515776-08:00","updated_at":"2025-11-05T00:08:42.812659-08:00","closed_at":"2025-11-05T00:08:42.812662-08:00"}
{"id":"bd-4ry","content_hash":"d71a38227ebcb455452f96d07ef100d9c82698aa36c2d4eef5842ca4f1a68fa9","title":"Clarify JSONL size bounds with multi-repo","description":"The contributor-workflow-analysis.md states (line 226): 'Keep beads.jsonl small enough for agents to read (\u003c25k)'\n\nWith multi-repo hydration, it's unclear whether this bound applies to:\n- Each individual JSONL file (likely intention)\n- The total hydrated size across all repos (unclear)\n- Both (most conservative)\n\nClarification needed because:\n- VC monitors .beads/issues.jsonl size to stay under limit\n- With multi-repo, VC needs to know if each additional repo also has 25k limit\n- Agents reading hydrated data need to know total size bounds\n- Performance characteristics depend on total vs per-repo limits\n\nExample scenario:\n- Primary repo: 20k JSONL\n- Planning repo: 15k JSONL\n- Total hydrated: 35k\nIs this acceptable or does it violate the \u003c25k principle?","acceptance_criteria":"- Documentation explicitly states size bound applies per-repo or total\n- Rationale explained (why that bound matters)\n- Guidance for monitoring size with multi-repo\n- If total bound exists, formula provided (e.g., sum of all repos \u003c25k)","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T20:24:50.042748-08:00","updated_at":"2025-11-03T20:24:50.042748-08:00"}
{"id":"bd-502e","content_hash":"0f40053f59ff205d858a9ddf0be845df1d52471cc25a812df78cb3d4667efbdd","title":"Add comprehensive tests for sync branch daemon logic","description":"The daemon sync branch functionality (bd-6545) was implemented but needs proper end-to-end testing.\n\nCurrent implementation:\n- daemon_sync_branch.go has syncBranchCommitAndPush() and syncBranchPull()\n- daemon_sync.go has been updated to use these functions when sync.branch is configured\n- All daemon tests pass, but no specific tests for sync branch behavior\n\nTesting needed:\n- Test that daemon commits to sync branch when sync.branch is configured\n- Test that daemon commits to current branch when sync.branch is NOT configured (backward compatibility)\n- Test that daemon pulls from sync branch and syncs JSONL back to main repo\n- Test worktree creation and health checks during daemon operations\n- Test error handling (missing branch, worktree corruption, etc.)\n\nKey challenge: Tests need to run in the context of the git repo (getGitRoot() uses current working directory), so test setup needs to properly change directory or mock the git root detection.\n\nReference existing daemon tests in daemon_test.go and daemon_autoimport_test.go for patterns.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T15:59:13.341491-08:00","updated_at":"2025-11-02T16:39:53.278313-08:00","closed_at":"2025-11-02T16:39:53.278313-08:00","dependencies":[{"issue_id":"bd-502e","depends_on_id":"bd-6545","type":"parent-child","created_at":"2025-11-02T15:59:13.342331-08:00","created_by":"daemon"}]}
{"id":"bd-5314bddf","content_hash":"bbaf3bd26766fb78465900c455661a3608ab1d1485cb964d12229badf138753a","title":"bd detect-pollution - Test pollution detector","description":"Detect test issues that leaked into production DB.\n\nPattern matching for:\n- Titles starting with 'test', 'benchmark', 'sample'\n- Sequential numbering (test-1, test-2)\n- Generic descriptions\n- Created in rapid succession\n\nOptional AI scoring for confidence.\n\nFiles: cmd/bd/detect_pollution.go (new)","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-28T14:48:17.466906-07:00","updated_at":"2025-10-30T17:12:58.219307-07:00"}
{"id":"bd-537e","content_hash":"88c95061990fd7be8e008d2571bf3cda613f6dda50218d7166a3c7af7e28469f","title":"Add external_ref change tracking and auditing","description":"Currently we don't track when external_ref is added, removed, or changed. This would be useful for debugging and auditing.\n\nProposed features:\n- Log event when external_ref changes\n- Track in events table with old/new values\n- Add query to find issues where external_ref changed\n- Add metrics: issues with external_ref vs without\n\nUse cases:\n- Debugging import issues\n- Understanding which issues are externally managed\n- Auditing external system linkage\n\nRelated: bd-1022","status":"open","priority":4,"issue_type":"feature","created_at":"2025-11-02T15:32:31.276883-08:00","updated_at":"2025-11-02T15:32:31.276883-08:00"}
{"id":"bd-581b80b3","content_hash":"04c4d952852ae2673e551d9776698c52b0189754ac5f9ca295bed464a5b86a43","title":"bd find-duplicates - AI-powered duplicate detection","description":"Find semantically duplicate issues.\n\nApproaches:\n1. Mechanical: Exact title/description matching\n2. Embeddings: Cosine similarity (cheap, scalable)\n3. AI: LLM-based semantic comparison (expensive, accurate)\n\nUses embeddings by default for \u003e100 issues.\n\nFiles: cmd/bd/find_duplicates.go (new)","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-29T20:49:49.126801-07:00","updated_at":"2025-10-30T17:12:58.218673-07:00"}
{"id":"bd-58c0","content_hash":"112d4123250ac875619a1f239cbf73c859b58d87f2b45a2d649da320dd72ecc5","title":"Fix transaction conflict in TryResurrectParent","description":"Integration test TestImportWithDeletedParent fails with 'database is locked' error when resurrection happens inside CreateIssue.\n\nRoot cause: TryResurrectParent calls conn.Get() and insertIssue() which conflicts with existing transaction in CreateIssue.\n\nError: failed to create tombstone for parent bd-parent: failed to insert issue: sqlite3: database is locked\n\nSolution: Refactor resurrection to accept optional transaction parameter, use existing transaction when available instead of creating new connection.\n\nImpact: Blocks resurrection from working in CreateIssue flow, only works in EnsureIDs (which may not have active transaction).","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-04T16:32:20.981027-08:00","updated_at":"2025-11-04T17:00:44.258881-08:00","closed_at":"2025-11-04T17:00:44.258881-08:00","dependencies":[{"issue_id":"bd-58c0","depends_on_id":"bd-d19a","type":"discovered-from","created_at":"2025-11-04T16:32:20.981969-08:00","created_by":"daemon"}]}
{"id":"bd-5a90","content_hash":"819c14b3bb55fcd113b4e848e4bfcb0c3475756658575dba8d34922ca8e14077","title":"Test parent issue","description":"","status":"open","priority":3,"issue_type":"task","created_at":"2025-11-02T11:50:35.85367-08:00","updated_at":"2025-11-02T11:50:35.85367-08:00"}
{"id":"bd-5a90","content_hash":"819c14b3bb55fcd113b4e848e4bfcb0c3475756658575dba8d34922ca8e14077","title":"Test parent issue","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-02T11:50:35.85367-08:00","updated_at":"2025-11-05T00:16:48.656608-08:00","closed_at":"2025-11-05T00:16:48.656608-08:00"}
{"id":"bd-5b6e","content_hash":"f82a86b4aae21311f23c8511a242f16e96d03836300995fadd43b8bea945cefa","title":"Add tests for helper functions (GetDirtyIssueHash, GetAllDependencyRecords, export hashes)","description":"Several utility functions have 0% coverage:\n- GetDirtyIssueHash (dirty.go)\n- GetAllDependencyRecords (dependencies.go)\n- GetExportHash, SetExportHash, ClearAllExportHashes (hash.go)\n\nThese are lower priority but should have basic coverage.","status":"open","priority":4,"issue_type":"task","created_at":"2025-11-01T22:40:58.989976-07:00","updated_at":"2025-11-01T22:40:58.989976-07:00"}
{"id":"bd-5bbf","content_hash":"a7c234437e23726f7a6d9733b20e6a344d1e352a1820b6cce6cd79a3fe1c8713","title":"Test all core bd commands in WASM for feature parity","description":"Comprehensive testing of bd-wasm against native bd:\n- Test all CRUD operations (create, update, show, close)\n- Test dependency management (dep add, dep tree)\n- Test sync operations (sync, import, export)\n- Verify JSONL output matches native bd\n- Run existing Go test suite in WASM if possible\n- Benchmark performance (should be within 2x of native)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T21:58:07.300923-08:00","updated_at":"2025-11-05T00:47:14.361359-08:00","closed_at":"2025-11-05T00:47:14.361361-08:00","dependencies":[{"issue_id":"bd-5bbf","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.503229-08:00","created_by":"stevey"},{"issue_id":"bd-5bbf","depends_on_id":"bd-b4b0","type":"blocks","created_at":"2025-11-02T22:23:55.623601-08:00","created_by":"stevey"}]}
{"id":"bd-5bbf","content_hash":"a7c234437e23726f7a6d9733b20e6a344d1e352a1820b6cce6cd79a3fe1c8713","title":"Test all core bd commands in WASM for feature parity","description":"Comprehensive testing of bd-wasm against native bd:\n- Test all CRUD operations (create, update, show, close)\n- Test dependency management (dep add, dep tree)\n- Test sync operations (sync, import, export)\n- Verify JSONL output matches native bd\n- Run existing Go test suite in WASM if possible\n- Benchmark performance (should be within 2x of native)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T21:58:07.300923-08:00","updated_at":"2025-11-05T00:55:48.757247-08:00","closed_at":"2025-11-05T00:55:48.757249-08:00","dependencies":[{"issue_id":"bd-5bbf","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.503229-08:00","created_by":"stevey"},{"issue_id":"bd-5bbf","depends_on_id":"bd-b4b0","type":"blocks","created_at":"2025-11-02T22:23:55.623601-08:00","created_by":"stevey"}]}
{"id":"bd-5c4","content_hash":"d3443a078da2a2f77c3af572c6f43e614b3a62ef0fb87f902529085652df4317","title":"VCS-agnostic sync support","description":"Make bd sync work with multiple VCS types (git, jujutsu, mercurial, sapling) by detecting VCS per repo and using appropriate sync commands, supporting mixed-VCS multi-repo configs.","design":"Features:\n- Detect VCS type per repo (.git, .jj, .hg, .sl)\n- Sync adapters for each VCS type\n- bd sync runs appropriate commands per repo\n- Handle mixed-VCS configs (git + jj + hg)\n- Fallback to manual sync if no VCS detected\n\nExample:\nbd sync auto-detects:\n- . is git → git pull\n- ~/.beads-planning is jj → jj git fetch \u0026\u0026 jj rebase\n- ~/other is hg → hg pull \u0026\u0026 hg update","acceptance_criteria":"1. Detect VCS type per configured repo\n2. bd sync works with git, jj, hg, sapling\n3. Mixed-VCS configs supported\n4. Graceful fallback if no VCS detected\n5. Error messages guide user on manual sync\n6. Pure git workflows unchanged","status":"open","priority":2,"issue_type":"epic","created_at":"2025-11-04T11:22:00.837527-08:00","updated_at":"2025-11-04T11:22:00.837527-08:00","dependencies":[{"issue_id":"bd-5c4","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:21.817849-08:00","created_by":"daemon"}]}
{"id":"bd-5ce8","content_hash":"23d02fea82e0a87bbb4c878472a368e093262e98c7d1f286374955a5b14ae1e5","title":"Document protected branch workflow","description":"Create comprehensive documentation for protected branch workflow.\n\nTasks:\n- Add \"Protected Branch Workflow\" section to AGENTS.md\n- Create docs/PROTECTED_BRANCHES.md guide\n- Update README.md quick start\n- Add examples to examples/protected-branch/\n- Update bd init --help documentation\n- Add troubleshooting guide\n- Add migration guide for existing users\n- Record demo video (optional)\n\nEstimated effort: 2-3 days","acceptance_criteria":"- Clear quick start (\u003c 2 minutes to set up)\n- Detailed guide covers all scenarios\n- Examples work end-to-end\n- Troubleshooting answers common questions\n- Platform-agnostic (not GitHub-specific)","notes":"Completed protected branch workflow documentation. Created comprehensive guide (docs/PROTECTED_BRANCHES.md), updated AGENTS.md with workflow section, added feature to README.md, and created working example (examples/protected-branch/). All commands verified working (bd init --branch, bd sync --status, bd sync --merge, bd config get/set sync.branch).","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.59013-08:00","updated_at":"2025-11-04T11:10:23.530618-08:00","closed_at":"2025-11-04T11:10:23.530621-08:00","dependencies":[{"issue_id":"bd-5ce8","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.379767-08:00","created_by":"stevey"}]}
{"id":"bd-5e1f","content_hash":"5b0aa7a2f651393bc13c46c172828acc4306d22d749ff71fbae96f0d25741847","title":"Issue with desc","description":"This is a description","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-10-31T21:41:11.128718-07:00","updated_at":"2025-11-04T11:10:23.531094-08:00","closed_at":"2025-11-04T11:10:23.531097-08:00"}
@@ -85,11 +85,11 @@
{"id":"bd-69fbe98e","content_hash":"b9211785e5423ab62d313590115309dab023b0c418b8d06f8bf98442c1ff740d","title":"Implement \"bd daemons logs\" subcommand","description":"Add command to view daemon logs for a specific workspace. Requires daemon logging to file (may need separate issue for log infrastructure).","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-26T19:41:11.099659-07:00","updated_at":"2025-10-30T17:12:58.186556-07:00"}
{"id":"bd-6bebe013","content_hash":"80a473ecbec089a83cb325346eb851661d0fe35a25c6d73fb92827abcfa36267","title":"Rapid 1","description":"","status":"open","priority":3,"issue_type":"task","created_at":"2025-10-29T19:11:57.404437-07:00","updated_at":"2025-10-30T17:12:58.189046-07:00"}
{"id":"bd-6fe4622f","content_hash":"d0d8e0634aea5e60373d339b363d7601af5d42d0f90780a54a4978c3e39ca747","title":"Remove unreachable utility functions","description":"Several small utility functions are unreachable:\n\nFiles to clean:\n1. `internal/storage/sqlite/hash.go` - `computeIssueContentHash` (line 17)\n - Check if entire file can be deleted if only contains this function\n\n2. `internal/config/config.go` - `FileUsed` (line 151)\n - Delete unused config helper\n\n3. `cmd/bd/git_sync_test.go` - `verifyIssueOpen` (line 300)\n - Delete dead test helper\n\n4. `internal/compact/haiku.go` - `HaikuClient.SummarizeTier2` (line 81)\n - Tier 2 summarization not implemented\n - Options: implement feature OR delete method\n\nImpact: Removes 50-100 LOC depending on decisions","acceptance_criteria":"- Remove unreachable functions\n- If entire files can be deleted (like hash.go), delete them\n- For SummarizeTier2: decide to implement or delete, document decision\n- All tests pass: `go test ./...`\n- Verify no callers exist for each function","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-28T16:20:02.434573-07:00","updated_at":"2025-10-30T17:12:58.224957-07:00"}
{"id":"bd-6mjj","content_hash":"2226a78fdb09302679f4fd9424d4e8c8fbdef1ef374bdd3789471b4c0868358d","title":"Split test suites: fast vs. integration","description":"Reorganize tests into separate packages/files for fast unit tests vs slow integration tests.\n\nBenefits:\n- Clear separation of concerns\n- Easier to run just fast tests during development\n- Can parallelize CI jobs better\n\nFiles to organize:\n- beads_hash_multiclone_test.go (slow integration tests)\n- beads_integration_test.go (medium-speed integration tests)\n- Other test files (fast unit tests)","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-04T01:24:21.040347-08:00","updated_at":"2025-11-04T10:38:12.408674-08:00","closed_at":"2025-11-04T10:38:12.408674-08:00","dependencies":[{"issue_id":"bd-6mjj","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:21.041228-08:00","created_by":"daemon"}]}
{"id":"bd-710a4916","content_hash":"5595ff0955a9ff4e738d4ba4fc87ca9aecd98ffcb694a4932ede8d6d76c5c76c","title":"CRDT-based architecture for guaranteed convergence (v2.0)","description":"## Vision\nRedesign beads around Conflict-Free Replicated Data Types (CRDTs) to provide mathematical guarantees for N-way collision resolution at arbitrary scale.\n\n## Current Limitations\n- Content-hash based collision resolution fails at 5+ clones\n- Non-deterministic convergence in multi-round scenarios\n- UNIQUE constraint violations during rename operations\n- No formal proof of convergence properties\n\n## CRDT Benefits\n- Provably convergent (Strong Eventual Consistency)\n- Commutative/Associative/Idempotent operations\n- No coordination required between clones\n- Scales to 100+ concurrent workers\n- Well-understood mathematical foundations\n\n## Proposed Architecture\n\n### 1. UUID-Based IDs\nReplace sequential IDs with UUIDs:\n- Current: bd-1c63eb84, bd-9063acda, bd-4d80b7b1\n- CRDT: bd-a1b2c3d4-e5f6-7890-abcd-ef1234567890\n- Human aliases maintained separately: #42 maps to UUID\n\n### 2. Last-Write-Wins (LWW) Elements\nEach field becomes an LWW register:\n- title: (timestamp, clone_id, value)\n- status: (timestamp, clone_id, value)\n- Deterministic conflict resolution via Lamport timestamp + clone_id tiebreaker\n\n### 3. Operation Log\nTrack all operations as CRDT ops:\n- CREATE(uuid, timestamp, clone_id, fields)\n- UPDATE(uuid, field, timestamp, clone_id, value)\n- DELETE(uuid, timestamp, clone_id) - tombstone, not hard delete\n\n### 4. Sync as Merge\nSyncing becomes merging two CRDT states:\n- No merge conflicts possible\n- Deterministic merge function\n- Guaranteed convergence\n\n## Implementation Phases\n\n### Phase 1: Research \u0026 Design (4 weeks)\n- Study existing CRDT implementations (Automerge, Yjs, Loro)\n- Design schema for CRDT-based issue tracking\n- Prototype LWW-based Issue CRDT\n- Benchmark performance vs current system\n\n### Phase 2: Parallel Implementation (6 weeks)\n- Implement CRDT storage layer alongside SQLite\n- Build conversion tools: SQLite ↔ CRDT\n- Maintain backward compatibility with v1.x format\n- Migration path for existing databases\n\n### Phase 3: Testing \u0026 Validation (4 weeks)\n- Formal verification of convergence properties\n- Stress testing with 100+ clone scenario\n- Performance profiling and optimization\n- Documentation and examples\n\n### Phase 4: Migration \u0026 Rollout (4 weeks)\n- Release v2.0-beta with CRDT backend\n- Gradual migration from v1.x\n- Monitoring and bug fixes\n- Final v2.0 release\n\n## Risks \u0026 Mitigations\n\n**Risk 1: Performance overhead**\n- Mitigation: Benchmark early, optimize hot paths\n- CRDTs can be slower than append-only logs\n- May need compaction strategy\n\n**Risk 2: Storage bloat**\n- Mitigation: Implement operation log compaction\n- Tombstone garbage collection for deleted issues\n- Periodic snapshots to reduce log size\n\n**Risk 3: Breaking changes**\n- Mitigation: Maintain v1.x compatibility layer\n- Gradual migration tools\n- Dual-mode operation during transition\n\n**Risk 4: Complexity**\n- Mitigation: Use battle-tested CRDT libraries\n- Comprehensive documentation\n- Clear migration guide\n\n## Success Criteria\n- 100-clone collision test passes without failures\n- Formal proof of convergence properties\n- Performance within 2x of current system\n- Zero manual conflict resolution required\n- Backward compatible with v1.x databases\n\n## Timeline\n18-20 weeks total (4-5 months)\n\n## References\n- Automerge: https://automerge.org\n- Yjs: https://docs.yjs.dev\n- Loro: https://loro.dev\n- CRDT theory: Shapiro et al, A comprehensive study of CRDTs\n- Related issues: bd-e6d71828, bd-7a2b58fc,-1","status":"open","priority":3,"issue_type":"feature","created_at":"2025-10-29T10:23:57.978339-07:00","updated_at":"2025-10-30T17:12:58.182513-07:00"}
{"id":"bd-6mjj","content_hash":"58241cff197abd4917d1d25424731cc3cb15a333ea961a034fb54aecc0c5be34","title":"Split test suites: fast vs. integration","description":"Reorganize tests into separate packages/files for fast unit tests vs slow integration tests.\n\nBenefits:\n- Clear separation of concerns\n- Easier to run just fast tests during development\n- Can parallelize CI jobs better\n\nFiles to organize:\n- beads_hash_multiclone_test.go (slow integration tests)\n- beads_integration_test.go (medium-speed integration tests)\n- Other test files (fast unit tests)","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-04T01:24:21.040347-08:00","updated_at":"2025-11-04T10:38:12.408674-08:00","closed_at":"2025-11-04T10:38:12.408674-08:00","dependencies":[{"issue_id":"bd-6mjj","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:21.041228-08:00","created_by":"daemon"}]}
{"id":"bd-710a4916","content_hash":"3d8be03f83f87067b1aaf295b0b829d20890e47686e0da10ef81d2096f5ca974","title":"CRDT-based architecture for guaranteed convergence (v2.0)","description":"## Vision\nRedesign beads around Conflict-Free Replicated Data Types (CRDTs) to provide mathematical guarantees for N-way collision resolution at arbitrary scale.\n\n## Current Limitations\n- Content-hash based collision resolution fails at 5+ clones\n- Non-deterministic convergence in multi-round scenarios\n- UNIQUE constraint violations during rename operations\n- No formal proof of convergence properties\n\n## CRDT Benefits\n- Provably convergent (Strong Eventual Consistency)\n- Commutative/Associative/Idempotent operations\n- No coordination required between clones\n- Scales to 100+ concurrent workers\n- Well-understood mathematical foundations\n\n## Proposed Architecture\n\n### 1. UUID-Based IDs\nReplace sequential IDs with UUIDs:\n- Current: bd-1c63eb84, bd-9063acda, bd-4d80b7b1\n- CRDT: bd-a1b2c3d4-e5f6-7890-abcd-ef1234567890\n- Human aliases maintained separately: #42 maps to UUID\n\n### 2. Last-Write-Wins (LWW) Elements\nEach field becomes an LWW register:\n- title: (timestamp, clone_id, value)\n- status: (timestamp, clone_id, value)\n- Deterministic conflict resolution via Lamport timestamp + clone_id tiebreaker\n\n### 3. Operation Log\nTrack all operations as CRDT ops:\n- CREATE(uuid, timestamp, clone_id, fields)\n- UPDATE(uuid, field, timestamp, clone_id, value)\n- DELETE(uuid, timestamp, clone_id) - tombstone, not hard delete\n\n### 4. Sync as Merge\nSyncing becomes merging two CRDT states:\n- No merge conflicts possible\n- Deterministic merge function\n- Guaranteed convergence\n\n## Implementation Phases\n\n### Phase 1: Research \u0026 Design (4 weeks)\n- Study existing CRDT implementations (Automerge, Yjs, Loro)\n- Design schema for CRDT-based issue tracking\n- Prototype LWW-based Issue CRDT\n- Benchmark performance vs current system\n\n### Phase 2: Parallel Implementation (6 weeks)\n- Implement CRDT storage layer alongside SQLite\n- Build conversion tools: SQLite ↔ CRDT\n- Maintain backward compatibility with v1.x format\n- Migration path for existing databases\n\n### Phase 3: Testing \u0026 Validation (4 weeks)\n- Formal verification of convergence properties\n- Stress testing with 100+ clone scenario\n- Performance profiling and optimization\n- Documentation and examples\n\n### Phase 4: Migration \u0026 Rollout (4 weeks)\n- Release v2.0-beta with CRDT backend\n- Gradual migration from v1.x\n- Monitoring and bug fixes\n- Final v2.0 release\n\n## Risks \u0026 Mitigations\n\n**Risk 1: Performance overhead**\n- Mitigation: Benchmark early, optimize hot paths\n- CRDTs can be slower than append-only logs\n- May need compaction strategy\n\n**Risk 2: Storage bloat**\n- Mitigation: Implement operation log compaction\n- Tombstone garbage collection for deleted issues\n- Periodic snapshots to reduce log size\n\n**Risk 3: Breaking changes**\n- Mitigation: Maintain v1.x compatibility layer\n- Gradual migration tools\n- Dual-mode operation during transition\n\n**Risk 4: Complexity**\n- Mitigation: Use battle-tested CRDT libraries\n- Comprehensive documentation\n- Clear migration guide\n\n## Success Criteria\n- 100-clone collision test passes without failures\n- Formal proof of convergence properties\n- Performance within 2x of current system\n- Zero manual conflict resolution required\n- Backward compatible with v1.x databases\n\n## Timeline\n18-20 weeks total (4-5 months)\n\n## References\n- Automerge: https://automerge.org\n- Yjs: https://docs.yjs.dev\n- Loro: https://loro.dev\n- CRDT theory: Shapiro et al, A comprehensive study of CRDTs\n- Related issues: bd-e6d71828, bd-7a2b58fc,-1","status":"open","priority":3,"issue_type":"feature","created_at":"2025-10-29T10:23:57.978339-07:00","updated_at":"2025-10-30T17:12:58.182513-07:00"}
{"id":"bd-72w","content_hash":"55110afd5c4cd8e94796fe61fada9e32351e76f7fca57ce15e52fe6443e6e117","title":"Q4 Platform Improvements","description":"## Overview\n\n[Describe the high-level goal and scope of this epic]\n\n## Success Criteria\n\n- [ ] Criteria 1\n- [ ] Criteria 2\n- [ ] Criteria 3\n\n## Background\n\n[Provide context and motivation]\n\n## Scope\n\n**In Scope:**\n- Item 1\n- Item 2\n\n**Out of Scope:**\n- Item 1\n- Item 2\n","design":"## Architecture\n\n[Describe the overall architecture and approach]\n\n## Components\n\n- Component 1: [description]\n- Component 2: [description]\n\n## Dependencies\n\n[List external dependencies or constraints]\n","acceptance_criteria":"- [ ] All child issues are completed\n- [ ] Integration tests pass\n- [ ] Documentation is updated\n- [ ] Code review completed\n","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-03T19:54:03.794244-08:00","updated_at":"2025-11-05T00:25:06.51152-08:00","closed_at":"2025-11-05T00:25:06.51152-08:00","labels":["epic"]}
{"id":"bd-7315","content_hash":"81137222aba60b33d3bcd7637891cf94547b5c876a1608e3e3370a578ba165f3","title":"Add validation for duplicate external_ref in batch imports","description":"Currently, if a batch import contains multiple issues with the same external_ref, the behavior is undefined. We should detect and handle this case.\n\nCurrent behavior:\n- No validation for duplicate external_ref within a batch\n- Last-write-wins or non-deterministic behavior\n\nProposed solution:\n- Detect duplicate external_ref values in incoming batch\n- Fail with clear error message OR\n- Merge duplicates intelligently (use newest timestamp)\n- Add test case for this scenario\n\nRelated: bd-1022","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T15:31:55.85634-08:00","updated_at":"2025-11-02T16:03:50.374552-08:00","closed_at":"2025-11-02T16:03:50.374552-08:00"}
{"id":"bd-7324","content_hash":"639f5eef2922178daae7416831b850bf58ebeb39b8b91e7124387e0b6dfea33c","title":"Add is_tombstone flag to schema","description":"Optionally add is_tombstone boolean field to issues table. Marks resurrected parents that were deleted. Allows distinguishing tombstones from normal deleted issues. Update schema.go and create migration.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:31:59.745076-08:00","updated_at":"2025-11-05T00:25:06.592801-08:00","closed_at":"2025-11-05T00:25:06.592801-08:00"}
{"id":"bd-7324","content_hash":"639f5eef2922178daae7416831b850bf58ebeb39b8b91e7124387e0b6dfea33c","title":"Add is_tombstone flag to schema","description":"Optionally add is_tombstone boolean field to issues table. Marks resurrected parents that were deleted. Allows distinguishing tombstones from normal deleted issues. Update schema.go and create migration.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:31:59.745076-08:00","updated_at":"2025-11-05T00:44:27.947578-08:00","closed_at":"2025-11-05T00:44:27.947584-08:00"}
{"id":"bd-736d","content_hash":"4743b1f41ff07fee3daa63240f0d5f7ac3f876e928b22c4ce0bee2cdf544e53a","title":"Refactor path canonicalization into helper function","description":"The path canonicalization logic (filepath.Abs + EvalSymlinks) is duplicated in 3 places:\n- beads.go:131-137 (BEADS_DIR handling)\n- cmd/bd/main.go:446-451 (--no-db cleanup)\n- cmd/bd/nodb.go:26-31 (--no-db initialization)\n\nRefactoring suggestion:\nExtract to a helper function like:\n func canonicalizePath(path string) string\n\nThis would:\n- Reduce code duplication\n- Make the logic easier to maintain\n- Ensure consistent behavior across all path handling\n\nRelated to bd-e16b implementation.","status":"open","priority":3,"issue_type":"chore","created_at":"2025-11-02T18:33:47.727443-08:00","updated_at":"2025-11-02T18:33:47.727443-08:00"}
{"id":"bd-74ee","content_hash":"476deaacd64c91c96e5c9aca9ba0640dcf0f3854f9f11bbaa25a8ae80af3adf3","title":"Frontend task","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-03T19:11:59.358631-08:00","updated_at":"2025-11-05T00:25:06.457813-08:00","closed_at":"2025-11-05T00:25:06.457813-08:00","labels":["frontend","week1"]}
{"id":"bd-78w","content_hash":"dd79ef79bf68b3a87f3a5b8d50fdfba9d6c6f7e6d728713e37dd34cf9fff835e","title":"Test Epic 2","description":"## Overview\n\n[Describe the high-level goal and scope of this epic]\n\n## Success Criteria\n\n- [ ] Criteria 1\n- [ ] Criteria 2\n- [ ] Criteria 3\n\n## Background\n\n[Provide context and motivation]\n\n## Scope\n\n**In Scope:**\n- Item 1\n- Item 2\n\n**Out of Scope:**\n- Item 1\n- Item 2\n","design":"## Architecture\n\n[Describe the overall architecture and approach]\n\n## Components\n\n- Component 1: [description]\n- Component 2: [description]\n\n## Dependencies\n\n[List external dependencies or constraints]\n","acceptance_criteria":"- [ ] All child issues are completed\n- [ ] Integration tests pass\n- [ ] Documentation is updated\n- [ ] Code review completed\n","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-03T20:15:03.878216-08:00","updated_at":"2025-11-05T00:25:06.566242-08:00","closed_at":"2025-11-05T00:25:06.566242-08:00","labels":["epic"]}
@@ -100,15 +100,15 @@
{"id":"bd-7e7ddffa","content_hash":"80a5b60d066d509bbd8d0f1340a16ea1d989d9178910155da3ff2c8df245b9c9","title":"Repair Commands \u0026 AI-Assisted Tooling","description":"Add specialized repair tools to reduce agent repair burden:\n1. Git merge conflicts in JSONL\n2. Duplicate issues from parallel work\n3. Semantic inconsistencies\n4. Orphaned references\n\nSee ~/src/fred/beads/repair_commands.md for full design doc.\n\nReduces agent repair time from 5-10 minutes to \u003c30 seconds per repair.","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-10-28T19:30:17.465812-07:00","updated_at":"2025-11-02T16:40:51.866302-08:00","closed_at":"2025-11-02T16:40:51.866302-08:00"}
{"id":"bd-7e7ddffa.1","content_hash":"3ab290915c117ec902bda1761e8c27850512f3fd4b494a93546c44b397d573a3","title":"bd resolve-conflicts - Git merge conflict resolver","description":"Automatically resolve JSONL merge conflicts.\n\nModes:\n- Mechanical: ID remapping (no AI)\n- AI-assisted: Smart merge/keep decisions\n- Interactive: Review each conflict\n\nHandles \u003c\u003c\u003c\u003c\u003c\u003c\u003c conflict markers in .beads/beads.jsonl\n\nFiles: cmd/bd/resolve_conflicts.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-28T14:48:30.083642-07:00","updated_at":"2025-11-02T16:40:46.620251-08:00","closed_at":"2025-11-02T16:40:46.620251-08:00","dependencies":[{"issue_id":"bd-7e7ddffa.1","depends_on_id":"bd-7e7ddffa","type":"parent-child","created_at":"2025-10-29T19:58:28.847736-07:00","created_by":"stevey"}]}
{"id":"bd-7fe8","content_hash":"106aa3a1717d3c2a6ff518a8881976fd70911b006714b04f47327959d7ca1444","title":"Fix linting error in migrate.go","description":"Linter reports error:\n```\ncmd/bd/migrate.go:647:37: cleanupWALFiles - result 0 (error) is always nil (unparam)\n```\n\nThe `cleanupWALFiles` function always returns nil, so the error return type should be removed or the function should actually return errors when appropriate.","status":"closed","priority":2,"issue_type":"chore","created_at":"2025-11-02T09:29:37.279747-08:00","updated_at":"2025-11-02T09:46:52.18793-08:00","closed_at":"2025-11-02T09:46:52.18793-08:00","dependencies":[{"issue_id":"bd-7fe8","depends_on_id":"bd-1231","type":"blocks","created_at":"2025-11-02T09:29:37.280881-08:00","created_by":"stevey"}]}
{"id":"bd-7kua","content_hash":"2dedc0d0d5444db45ab146cc59f3c51bc4bfc3c864da43d3c086a9153613c29f","title":"Reduce sync rounds in multiclone tests","description":"Analyze and reduce the number of sync rounds in hash multiclone tests.\n\nCurrent state:\n- TestHashIDs_MultiCloneConverge: 1 round of syncs across 3 clones\n- TestHashIDs_IdenticalContentDedup: 2 rounds across 2 clones\n\nInvestigation needed:\n- Profile to see how much time each sync takes\n- Determine minimum rounds needed for convergence\n- Consider making rounds configurable via env var\n\nFile: beads_hash_multiclone_test.go:70, :132","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-04T01:24:18.405038-08:00","updated_at":"2025-11-04T10:26:34.449434-08:00","closed_at":"2025-11-04T10:26:34.449434-08:00","dependencies":[{"issue_id":"bd-7kua","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:18.405883-08:00","created_by":"daemon"}]}
{"id":"bd-8072","content_hash":"32bd0e33433bbf535cb56eb47828ac80ebecc57512e9039420a39cd2342790d2","title":"Add import.orphan_handling config option","description":"Add configuration option to control orphan handling behavior: 'strict' (fail on missing parent, current behavior), 'resurrect' (auto-resurrect from JSONL, recommended default), 'skip' (skip orphaned issues with warning), 'allow' (import orphans without validation). Update CONFIG.md documentation.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:08.569239-08:00","updated_at":"2025-11-05T00:25:06.619278-08:00","closed_at":"2025-11-05T00:25:06.619278-08:00"}
{"id":"bd-812a","content_hash":"0d802dec82dff53e88e68bb4f1fef75754165a590996ff8b1578ff93e781622d","title":"Add unit tests for import ordering","description":"Test topological sort: import [child, parent] should succeed, import [parent.1.2, parent, parent.1] should sort correctly. Verify depth-based batching works. Test max depth limits.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.278448-08:00","updated_at":"2025-11-05T00:08:38.197477-08:00","closed_at":"2025-11-05T00:08:38.19748-08:00"}
{"id":"bd-7kua","content_hash":"3eced3edc7bf75e6a01bac566adf0d0f020dcfd8220fe56baf26419e0ffa6c4b","title":"Reduce sync rounds in multiclone tests","description":"Analyze and reduce the number of sync rounds in hash multiclone tests.\n\nCurrent state:\n- TestHashIDs_MultiCloneConverge: 1 round of syncs across 3 clones\n- TestHashIDs_IdenticalContentDedup: 2 rounds across 2 clones\n\nInvestigation needed:\n- Profile to see how much time each sync takes\n- Determine minimum rounds needed for convergence\n- Consider making rounds configurable via env var\n\nFile: beads_hash_multiclone_test.go:70, :132","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-04T01:24:18.405038-08:00","updated_at":"2025-11-04T10:26:34.449434-08:00","closed_at":"2025-11-04T10:26:34.449434-08:00","dependencies":[{"issue_id":"bd-7kua","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:18.405883-08:00","created_by":"daemon"}]}
{"id":"bd-8072","content_hash":"32bd0e33433bbf535cb56eb47828ac80ebecc57512e9039420a39cd2342790d2","title":"Add import.orphan_handling config option","description":"Add configuration option to control orphan handling behavior: 'strict' (fail on missing parent, current behavior), 'resurrect' (auto-resurrect from JSONL, recommended default), 'skip' (skip orphaned issues with warning), 'allow' (import orphans without validation). Update CONFIG.md documentation.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:08.569239-08:00","updated_at":"2025-11-05T00:44:27.948157-08:00","closed_at":"2025-11-05T00:44:27.94816-08:00"}
{"id":"bd-812a","content_hash":"0d802dec82dff53e88e68bb4f1fef75754165a590996ff8b1578ff93e781622d","title":"Add unit tests for import ordering","description":"Test topological sort: import [child, parent] should succeed, import [parent.1.2, parent, parent.1] should sort correctly. Verify depth-based batching works. Test max depth limits.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.278448-08:00","updated_at":"2025-11-05T00:08:42.812949-08:00","closed_at":"2025-11-05T00:08:42.812952-08:00"}
{"id":"bd-824","content_hash":"c6895598595873d74698771b8687ffbd60999120fed85a5c1d7c2176d7d2976f","title":"Add migration guide for library consumers","description":"The contributor-workflow-analysis.md has excellent migration examples for CLI users (lines 508-549) but lacks examples for library consumers like VC that use beadsLib in Go/TypeScript code.\n\nLibrary consumers need to know:\n- Whether their existing code continues to work unchanged (backward compatibility)\n- How config.toml is automatically read (transparent hydration)\n- When and how to use explicit multi-repo configuration\n- What happens if config.toml doesn't exist (defaults)\n\nExample needed:\n```go\n// Before (v0.17.3)\nstore, err := beadsLib.NewSQLiteStorage(\".beads/vc.db\")\n\n// After (v0.18.0 with multi-repo) - still works!\nstore, err := beadsLib.NewSQLiteStorage(\".beads/vc.db\")\n// Automatically reads .beads/config.toml if present\n\n// Explicit multi-repo (if needed)\ncfg := beadsLib.Config{\n Primary: \".beads/vc.db\",\n Additional: []string{\"~/.beads-planning\"},\n}\nstore, err := beadsLib.NewStorageWithConfig(cfg)\n```","acceptance_criteria":"- Section added to contributor-workflow-analysis.md for library consumers\n- Code examples showing backward compatibility\n- Code examples showing explicit multi-repo configuration\n- Guidance on when library consumers should use multi-repo vs single-repo","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T20:24:17.748337-08:00","updated_at":"2025-11-03T20:24:17.748337-08:00"}
{"id":"bd-833559b3","content_hash":"e75bad8689c6372ea7096401604ae998028b81551887f7164556917f4b123eef","title":"bd validate - Comprehensive health check","description":"Run all validation checks in one command.\n\nChecks:\n- Duplicates\n- Orphaned dependencies\n- Test pollution\n- Git conflicts\n\nSupports --fix-all for auto-repair.\n\nDepends on bd-cbed9619.1, bd-0dcea000, bd-2752a7a2, bd-9826b69a.\n\nFiles: cmd/bd/validate.go (new)","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-29T20:02:47.957692-07:00","updated_at":"2025-10-30T17:12:58.219095-07:00"}
{"id":"bd-8507","content_hash":"96a07fcf39392143fa9c75cbc96f54136809609f6ced80dd9581ec9144d54b1f","title":"Publish bd-wasm to npm","description":"Package and publish WASM build to npm. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Optimize WASM bundle (compression)\n- [ ] Create README for npm package\n- [ ] Set up npm publishing workflow\n- [ ] Publish v0.1.0-alpha\n- [ ] Test installation in clean environment\n- [ ] Update beads AGENTS.md with installation instructions\n\n## Package Name\nbd-wasm (or @beads/wasm-cli)","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.371535-08:00","updated_at":"2025-11-05T00:47:14.361641-08:00","closed_at":"2025-11-05T00:47:14.361643-08:00","dependencies":[{"issue_id":"bd-8507","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.372224-08:00","created_by":"daemon"}]}
{"id":"bd-833559b3","content_hash":"9082c986207b9df7a7a4dc87a53007849e2b9f6e92f3bea41e22d6a14f1f6f42","title":"bd validate - Comprehensive health check","description":"Run all validation checks in one command.\n\nChecks:\n- Duplicates\n- Orphaned dependencies\n- Test pollution\n- Git conflicts\n\nSupports --fix-all for auto-repair.\n\nDepends on bd-cbed9619.1, bd-0dcea000, bd-2752a7a2, bd-9826b69a.\n\nFiles: cmd/bd/validate.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-29T20:02:47.957692-07:00","updated_at":"2025-11-05T00:16:42.294117-08:00","closed_at":"2025-11-05T00:16:42.294117-08:00"}
{"id":"bd-8507","content_hash":"96a07fcf39392143fa9c75cbc96f54136809609f6ced80dd9581ec9144d54b1f","title":"Publish bd-wasm to npm","description":"Package and publish WASM build to npm. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Optimize WASM bundle (compression)\n- [ ] Create README for npm package\n- [ ] Set up npm publishing workflow\n- [ ] Publish v0.1.0-alpha\n- [ ] Test installation in clean environment\n- [ ] Update beads AGENTS.md with installation instructions\n\n## Package Name\nbd-wasm (or @beads/wasm-cli)","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.371535-08:00","updated_at":"2025-11-05T00:55:48.757492-08:00","closed_at":"2025-11-05T00:55:48.757494-08:00","dependencies":[{"issue_id":"bd-8507","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.372224-08:00","created_by":"daemon"}]}
{"id":"bd-8534","content_hash":"05b543a341ac0210f6025318e2eaead1da295b8d270fd17356fa3337c856607d","title":"Switch from modernc.org/sqlite to ncruces/go-sqlite3 for WASM support","description":"modernc.org/sqlite depends on modernc.org/libc which has no js/wasm support (platform-specific syscalls). Need to switch to ncruces/go-sqlite3 which wraps a WASM build of SQLite using wazero runtime.\n\nKey differences:\n- ncruces/go-sqlite3: Uses WASM build of SQLite + wazero runtime\n- modernc.org/sqlite: Pure Go translation, requires libc for syscalls\n\nThis is a prerequisite for bd-62a0 (WASM build infrastructure).","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T22:14:27.627154-08:00","updated_at":"2025-11-02T22:23:49.377223-08:00","closed_at":"2025-11-02T22:23:49.377223-08:00","dependencies":[{"issue_id":"bd-8534","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.555691-08:00","created_by":"stevey"}]}
{"id":"bd-85487065","content_hash":"637cbd56af122b175ff060b4df050871fe86124c5d883ba7f8a17f2f95479613","title":"Add tests for internal/autoimport package","description":"Currently 0.0% coverage. Need tests for auto-import functionality that detects and imports updated JSONL files.","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-29T14:06:18.154805-07:00","updated_at":"2025-10-30T17:12:58.182987-07:00"}
{"id":"bd-85d1","content_hash":"a82c0064b840eacb4896f68e73650a3e99aaeaffbb2a7269a857b6c4245b5572","title":"Add integration tests for multi-repo sync","description":"Test: Clone A deletes issue, Clone B imports Clone A's JSONL. Verify Clone B handles deletion gracefully with resurrection. Test concurrent imports with same orphans (should be idempotent). Test round-trip fidelity (export→delete parent→import→verify structure).","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.410318-08:00","updated_at":"2025-11-05T00:25:06.707471-08:00","closed_at":"2025-11-05T00:25:06.707471-08:00"}
{"id":"bd-85d1","content_hash":"a82c0064b840eacb4896f68e73650a3e99aaeaffbb2a7269a857b6c4245b5572","title":"Add integration tests for multi-repo sync","description":"Test: Clone A deletes issue, Clone B imports Clone A's JSONL. Verify Clone B handles deletion gracefully with resurrection. Test concurrent imports with same orphans (should be idempotent). Test round-trip fidelity (export→delete parent→import→verify structure).","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.410318-08:00","updated_at":"2025-11-05T00:44:27.948465-08:00","closed_at":"2025-11-05T00:44:27.948467-08:00"}
{"id":"bd-879d","content_hash":"9716c230d9b2793bd1e51d9e3c380c06caf7b3e9a0dd20253764af19e3de7ac8","title":"Test issue 1","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T09:44:12.538697729Z","updated_at":"2025-11-02T09:45:20.76214671Z","closed_at":"2025-11-02T09:45:20.76214671Z","dependencies":[{"issue_id":"bd-879d","depends_on_id":"bd-d3e5","type":"discovered-from","created_at":"2025-11-02T09:44:22.103468321Z","created_by":"mrdavidlaing"}]}
{"id":"bd-87a0","content_hash":"b6c322852ff360ade9f0d46bb2af29a7cf3d3acc8b7469dcbb5d98bf48050240","title":"Publish @beads/bd package to npm registry","description":"Publish the npm package to the public npm registry:\n\n## Prerequisites\n- npm account created\n- Organization @beads created (or use different namespace)\n- npm login completed locally\n- Package tested locally (bd-f282 completed)\n\n## Publishing steps\n1. Verify package.json version matches current bd version\n2. Run npm pack and inspect tarball contents\n3. Test installation from tarball one more time\n4. Run npm publish --access public\n5. Verify package appears on https://www.npmjs.com/package/@beads/bd\n6. Test installation from registry: npm install -g @beads/bd\n\n## Post-publish\n- Add npm badge to README.md\n- Update CHANGELOG.md with npm package release\n- Announce in release notes\n\n## Note\n- May need to choose different name if @beads namespace unavailable\n- Alternative: beads-cli, bd-cli, or unscoped beads-issue-tracker","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T23:40:25.263569-08:00","updated_at":"2025-11-03T10:39:41.772338-08:00","closed_at":"2025-11-03T10:39:41.772338-08:00","dependencies":[{"issue_id":"bd-87a0","depends_on_id":"bd-febc","type":"parent-child","created_at":"2025-11-02T23:40:33.014043-08:00","created_by":"daemon"}]}
{"id":"bd-8931","content_hash":"409c16d9e6c83c2bf6cccfa6ee6cb18e1e1eee032b522fb99500bb40f2a05649","title":"Daemon gets stuck when auto-import blocked by git conflicts","description":"CRITICAL: The daemon enters a corrupt state that breaks RPC commands when auto-import is triggered but git pull fails due to uncommitted changes.\n\nImpact: This is a data integrity and usability issue that could cause users to lose trust in Beads. The daemon silently fails for certain commands while appearing healthy.\n\nReproduction:\n1. Make local changes to issues (creates uncommitted .beads/beads.jsonl)\n2. Remote has updates (JSONL newer, triggers auto-import)\n3. Daemon tries to pull but fails: 'cannot pull with rebase: You have unstaged changes'\n4. Daemon enters bad state - 'bd show' and other commands return EOF\n5. 'bd list' still works, daemon process is running, no errors logged\n\nTechnical details:\n- Auto-import check runs in handleRequest() before processing RPC commands\n- When import is blocked, it appears to corrupt daemon state\n- Likely: deadlock, unclosed transaction, or storage handle corruption\n- Panic recovery (server_lifecycle_conn.go:183) didn't catch anything - not a panic\n\nRequired fix:\n- Auto-import must not block RPC command execution\n- Handle git pull failures gracefully without corrupting state\n- Consider: skip auto-import if git is dirty, queue import for later, or use separate goroutine\n- Add timeout/circuit breaker for import operations\n- Log clear warnings when auto-import is skipped\n\nWithout this fix, users in collaborative environments will frequently encounter mysterious EOF errors that require daemon restarts.","design":"Options to fix:\n\n1. Skip auto-import when git is dirty (safest, simplest)\n - Check git status before pull\n - Log warning and continue without import\n - User must manually import after cleaning git state\n\n2. Async import with timeout (better UX)\n - Run auto-import in background goroutine\n - Don't block RPC command execution\n - Timeout after 5s, log error if stuck\n - Use sync.Once or similar to prevent concurrent imports\n\n3. Transactional import with rollback\n - Wrap import in database transaction\n - Rollback if git operations fail\n - Ensure storage is never left in bad state\n\nRecommended: Combine #1 and #2\n- Check git status first, skip if dirty\n- If clean, do async import with timeout\n- Add metrics to track import success/failure rates","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-02T17:15:25.181425-08:00","updated_at":"2025-11-03T12:08:12.949061-08:00","closed_at":"2025-11-03T12:08:12.949064-08:00","dependencies":[{"issue_id":"bd-8931","depends_on_id":"bd-1048","type":"blocks","created_at":"2025-11-02T17:15:25.181857-08:00","created_by":"stevey"}]}
@@ -116,14 +116,14 @@
{"id":"bd-89e2","content_hash":"c7da1d6c0d28b2fe9a5a1166a7b6712a870b5271fdf21558e4ef639e2675f92f","title":"Daemon race condition: stale export overwrites recent DB changes","description":"**Symptom:**\nMerged bd-fc2d into bd-fb05 in ~/src/beads (commit ce4d756), pushed to remote. The ~/src/fred/beads daemon then exported its stale DB state and committed (8cc1bb4), reverting bd-fc2d back to \"open\" status.\n\n**Timeline:**\n1. 21:45:12 - Merge committed from ~/src/beads (ce4d756): bd-fc2d closed\n2. 21:49:42 - Daemon in ~/src/fred/beads exported stale state (8cc1bb4): bd-fc2d open again\n\n**Root cause:**\nThe fred/beads daemon had a stale database (bd-fc2d still open) and didn't auto-import the newer JSONL before exporting. When it exported, it overwrote the merge with its stale state.\n\n**Expected behavior:**\nDaemon should detect that JSONL is newer than its last export and import before exporting.\n\n**Actual behavior:**\nDaemon exported stale DB state, creating a conflicting commit that reverted upstream changes.\n\n**Impact:**\nMulti-workspace setups with daemons can silently lose changes if one daemon has stale state and exports.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-01T21:53:07.930819-07:00","updated_at":"2025-11-01T22:01:25.54126-07:00","closed_at":"2025-11-01T22:01:25.54126-07:00"}
{"id":"bd-89f89fc0","content_hash":"235c3bdeb45e3069167f81e7b4e798fc98547478bb16df40556100478c5e505a","title":"Remove unreachable RPC methods","description":"Several RPC server and client methods are unreachable and should be removed:\n\nServer methods (internal/rpc/server.go):\n- `Server.GetLastImportTime` (line 2116)\n- `Server.SetLastImportTime` (line 2123)\n- `Server.findJSONLPath` (line 2255)\n\nClient methods (internal/rpc/client.go):\n- `Client.Import` (line 311) - RPC import not used (daemon uses autoimport)\n\nEvidence:\n```bash\ngo run golang.org/x/tools/cmd/deadcode@latest -test ./...\n```\n\nImpact: Removes ~80 LOC of unused RPC code","acceptance_criteria":"- Remove the 4 unreachable methods (~80 LOC total)\n- Verify no callers: `grep -r \"GetLastImportTime\\|SetLastImportTime\\|findJSONLPath\" .`\n- All tests pass: `go test ./internal/rpc/...`\n- Daemon functionality works: test daemon start/stop/operations","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-28T16:20:02.432202-07:00","updated_at":"2025-10-30T17:12:58.222655-07:00"}
{"id":"bd-8a39","content_hash":"cf11bd12f8906b73236f46998076d6111d69f05e76198e9823a8f10f3e03112b","title":"Fix Windows-specific test failures in CI","description":"Several tests are failing on Windows but passing on Linux:\n\n**Failing tests:**\n- TestFindDatabasePathEnvVar\n- TestHashIDs_MultiCloneConverge\n- TestHashIDs_IdenticalContentDedup\n- TestDatabaseReinitialization (all 5 subtests):\n - fresh_clone_auto_import\n - database_removal_scenario\n - legacy_filename_support\n - precedence_test\n - init_safety_check\n- TestFindBeadsDir_NotFound\n- TestMetricsSnapshot/uptime (in internal/rpc)\n\n**CI Run:** https://github.com/steveyegge/beads/actions/runs/19015638968\n\nThese are likely path separator or filesystem behavior differences between Windows and Linux.","notes":"Fixed all Windows path issues:\n1. TestFindDatabasePathEnvVar - expects canonicalized paths ✅\n2. TestHashIDs tests - use platform-specific bd.exe command ✅ \n3. TestMetricsSnapshot/uptime - enforce minimum 1 second uptime ✅\n4. TestFindBeadsDir_NotFound - allow finding .beads in parent dirs ✅\n5. TestDatabaseReinitialization - fix git path conversion on Windows (git returns /c/Users/... but filepath needs C:\\Users\\...) ✅\n\nCI run in progress to verify all fixes.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-02T09:29:37.274103-08:00","updated_at":"2025-11-02T12:32:00.158713-08:00","closed_at":"2025-11-02T12:32:00.158716-08:00","dependencies":[{"issue_id":"bd-8a39","depends_on_id":"bd-1231","type":"blocks","created_at":"2025-11-02T09:29:37.276579-08:00","created_by":"stevey"}]}
{"id":"bd-8b65","content_hash":"8675dbc7a679f06245ad85c184730d7bc495559d934ba4081886b576ed628d38","title":"Add depth-based batch creation in upsertIssues","description":"Replace single batch creation with depth-level batching (max depth 3). Create issues at depth 0, then 1, then 2, then 3. Prevents parent validation errors when importing hierarchical issues in same batch. File: internal/importer/importer.go:534-546","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:42.267746-08:00","updated_at":"2025-11-04T17:11:40.564789-08:00","closed_at":"2025-11-04T17:11:40.564789-08:00"}
{"id":"bd-8hf","content_hash":"ec57c5cb45f0afdbccf3c0b9e383f5ff8023f853393f8afda09189edc63ddd95","title":"Auto-routing and maintainer detection","description":"Implement intelligent routing to automatically send new issues to correct repo based on user's maintainer vs contributor status, with discovered issues inheriting parent's source_repo.","design":"Features:\n- Detect maintainer vs contributor (git config, permissions)\n- Config-based routing rules (no schema changes)\n- Auto-route 'bd add' to primary or planning repo\n- Discovered issues inherit parent's source_repo\n- Explicit override via --repo flag\n\nConfig schema:\n[routing]\nmode = \"auto\" # auto | explicit\ndefault = \"~/.beads-planning\"\n[routing.auto]\nmaintainer = \".\"\ncontributor = \"~/.beads-planning\"","acceptance_criteria":"1. Auto-detect maintainer vs contributor status\n2. Route bd add to correct repo automatically\n3. Discovered issues inherit parent's source_repo\n4. --repo flag overrides auto-routing\n5. Config allows explicit routing rules\n6. Works without breaking single-repo workflows","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:50.961196-08:00","updated_at":"2025-11-05T00:08:38.197718-08:00","closed_at":"2025-11-05T00:08:38.19772-08:00","dependencies":[{"issue_id":"bd-8hf","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:24.262815-08:00","created_by":"daemon"}]}
{"id":"bd-8b65","content_hash":"8675dbc7a679f06245ad85c184730d7bc495559d934ba4081886b576ed628d38","title":"Add depth-based batch creation in upsertIssues","description":"Replace single batch creation with depth-level batching (max depth 3). Create issues at depth 0, then 1, then 2, then 3. Prevents parent validation errors when importing hierarchical issues in same batch. File: internal/importer/importer.go:534-546","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:42.267746-08:00","updated_at":"2025-11-05T00:08:42.813239-08:00","closed_at":"2025-11-05T00:08:42.813246-08:00"}
{"id":"bd-8hf","content_hash":"ec57c5cb45f0afdbccf3c0b9e383f5ff8023f853393f8afda09189edc63ddd95","title":"Auto-routing and maintainer detection","description":"Implement intelligent routing to automatically send new issues to correct repo based on user's maintainer vs contributor status, with discovered issues inheriting parent's source_repo.","design":"Features:\n- Detect maintainer vs contributor (git config, permissions)\n- Config-based routing rules (no schema changes)\n- Auto-route 'bd add' to primary or planning repo\n- Discovered issues inherit parent's source_repo\n- Explicit override via --repo flag\n\nConfig schema:\n[routing]\nmode = \"auto\" # auto | explicit\ndefault = \"~/.beads-planning\"\n[routing.auto]\nmaintainer = \".\"\ncontributor = \"~/.beads-planning\"","acceptance_criteria":"1. Auto-detect maintainer vs contributor status\n2. Route bd add to correct repo automatically\n3. Discovered issues inherit parent's source_repo\n4. --repo flag overrides auto-routing\n5. Config allows explicit routing rules\n6. Works without breaking single-repo workflows","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:50.961196-08:00","updated_at":"2025-11-05T00:08:42.813482-08:00","closed_at":"2025-11-05T00:08:42.813484-08:00","dependencies":[{"issue_id":"bd-8hf","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:24.262815-08:00","created_by":"daemon"}]}
{"id":"bd-8rd","content_hash":"35b240c77c0960acd2810a0ace985b85cdde4d16a2c4af7192a9526434143fa9","title":"Migration and onboarding for multi-repo","description":"Create migration tools, wizards, and documentation to help users adopt multi-repo workflow, with special focus on OSS contributor onboarding and team adoption scenarios.","design":"Components:\n- Migration guide documentation\n- bd migrate command to move issues between repos\n- bd init --contributor wizard for OSS setup\n- bd init --team wizard for team setup\n- Auto-detect scenarios and prompt users\n- Examples for common workflows (OSS, multi-phase, personas)\n\nScenarios:\n1. OSS contributor (fork workflow)\n2. Team member (branch workflow)\n3. Multi-phase development\n4. Multiple personas (architect/implementer)","acceptance_criteria":"1. Migration guide covers all scenarios\n2. bd migrate moves issues with filtering\n3. Init wizards guide common setups\n4. Examples demonstrate key workflows\n5. Auto-detection prompts users when appropriate\n6. Docs updated with multi-repo patterns\n7. Backward compatibility clearly documented","status":"open","priority":2,"issue_type":"epic","created_at":"2025-11-04T11:22:13.491033-08:00","updated_at":"2025-11-04T11:22:13.491033-08:00","dependencies":[{"issue_id":"bd-8rd","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:21.858002-08:00","created_by":"daemon"}]}
{"id":"bd-9063acda","content_hash":"0ea4606188e376705c46a14e5d64da1b706aad47a39054a732c21330db601960","title":"Clean up linter errors (914 total issues)","description":"The codebase has 914 linter issues reported by golangci-lint. While many are documented as baseline in LINTING.md, we should clean these up systematically to improve code quality and maintainability.","design":"Break down by linter category, prioritizing high-impact issues:\n1. dupl (7) - Code duplication\n2. goconst (12) - Repeated strings\n3. gocyclo (11) - High complexity functions\n4. revive (78) - Style issues\n5. gosec (102) - Security warnings\n6. errcheck (683) - Unchecked errors (many in tests)","acceptance_criteria":"All linter categories reduced to acceptable levels, with remaining baseline documented in LINTING.md","notes":"Reduced from 56 to 41 issues locally, then to 0 issues.\n\n**Fixed in commits:**\n- c2c7eda: Fixed 15 actual errors (dupl, gosec, revive, staticcheck, unparam)\n- 963181d: Configured exclusions to get to 0 issues locally\n\n**Current status:**\n- ✅ Local: golangci-lint reports 0 issues\n- ❌ CI: Still failing (see [deleted:bd-cb64c226.1])\n\n**Problem:**\nConfig v2 format or golangci-lint-action@v8 compatibility issue causing CI to fail despite local success.\n\n**Next:** Debug [deleted:bd-cb64c226.1] to fix CI/local discrepancy","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-10-24T01:01:12.997982-07:00","updated_at":"2025-11-04T11:10:23.532431-08:00","closed_at":"2025-11-04T11:10:23.532433-08:00"}
{"id":"bd-90a5","content_hash":"e54904609d3be88a50850d032fbbc1729a48d79436ff0ab5204d1cc044b93c47","title":"Extract hash ID generation functions to hash_ids.go","description":"Move generateHashID, getNextChildNumber, GetNextChildID to hash_ids.go","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T19:28:54.890883-07:00","updated_at":"2025-11-02T12:32:00.159056-08:00","closed_at":"2025-11-02T12:32:00.159058-08:00"}
{"id":"bd-942469b8","content_hash":"be178337752bf9a94ac06f13d6c36752c9104585b9aef43ade971ed50437a39e","title":"Rapid 5","description":"","status":"open","priority":3,"issue_type":"task","created_at":"2025-10-29T19:11:57.508166-07:00","updated_at":"2025-10-30T17:12:58.189947-07:00"}
{"id":"bd-968f","content_hash":"41376d2927c9107898e7cb72aaa17a76d8b44692a78aa201123e8b2a0404ce34","title":"Add unit tests for config modes","description":"Test all four orphan_handling modes: strict (fails), resurrect (creates tombstone), skip (logs warning), allow (imports orphan). Verify error messages and logging output for each mode.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.367129-08:00","updated_at":"2025-11-05T00:25:06.673588-08:00","closed_at":"2025-11-05T00:25:06.673588-08:00"}
{"id":"bd-9ae788be","content_hash":"210f4f4bb4f9630102484bcf3556e45cc3073f618d7c20ca939a0246a9253959","title":"Implement clone-scoped ID allocation to prevent N-way collisions","description":"## Problem\nCurrent ID allocation uses per-clone atomic counters (issue_counters table) that sync based on local database state. In N-way collision scenarios:\n- Clone B sees {test-1} locally, allocates test-2\n- Clone D sees {test-1, test-2, test-3} locally, allocates test-4\n- When same content gets assigned test-2 and test-4, convergence fails\n\nRoot cause: Each clone independently allocates IDs without global coordination, leading to overlapping assignments for the same content.\n\n## Solution\nAdd clone UUID to ID allocation to make every ID globally unique:\n\n**Current format:** `test-1`, `test-2`, `test-3`\n**New format:** `test-1-a7b3`, `test-2-a7b3`, `test-3-c4d9`\n\nWhere suffix is first 4 chars of clone UUID.\n\n## Implementation\n\n### 1. Add clone_identity table\n```sql\nCREATE TABLE clone_identity (\n clone_uuid TEXT PRIMARY KEY,\n created_at DATETIME DEFAULT CURRENT_TIMESTAMP\n);\n```\n\n### 2. Modify getNextIDForPrefix()\n```go\nfunc (s *SQLiteStorage) getNextIDForPrefix(ctx context.Context, prefix string) (string, error) {\n cloneUUID := s.getOrCreateCloneUUID(ctx)\n shortUUID := cloneUUID[:4]\n \n nextNum := s.getNextCounterForPrefix(ctx, prefix)\n return fmt.Sprintf(\"%s-%d-%s\", prefix, nextNum, shortUUID), nil\n}\n```\n\n### 3. Update ID parsing logic\nAll places that parse IDs (utils.ExtractIssueNumber, etc.) need to handle new format.\n\n### 4. Migration strategy\n- Existing IDs remain unchanged (no suffix)\n- New IDs get clone suffix automatically\n- Display layer can hide suffix in UI: `bd-cb64c226.3-a7b3` → `#42`\n\n## Benefits\n- **Zero collision risk**: Same content in different clones gets different IDs\n- **Maintains readability**: Still sequential numbering within clone\n- **No coordination needed**: Works offline, no central authority\n- **Scales to 100+ clones**: 4-char hex = 65,536 unique clones\n\n## Concerns\n- ID format change may break existing integrations\n- Need migration path for existing databases\n- Display logic needs update to hide/show suffixes appropriately\n\n## Success Criteria\n- 10+ clone collision test passes without failures\n- Existing issues continue to work (backward compatibility)\n- Documentation updated with new ID format\n- Migration guide for v1.x → v2.x\n\n## Timeline\nMedium-term (v1.1-v1.2), 2-3 weeks implementation\n\n## References\n- Related to bd-e6d71828 (immediate fix)\n- See beads_nway_test.go for failing N-way tests","status":"open","priority":2,"issue_type":"feature","created_at":"2025-10-29T10:22:52.260524-07:00","updated_at":"2025-10-30T17:12:58.18193-07:00"}
{"id":"bd-968f","content_hash":"41376d2927c9107898e7cb72aaa17a76d8b44692a78aa201123e8b2a0404ce34","title":"Add unit tests for config modes","description":"Test all four orphan_handling modes: strict (fails), resurrect (creates tombstone), skip (logs warning), allow (imports orphan). Verify error messages and logging output for each mode.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.367129-08:00","updated_at":"2025-11-05T00:44:27.948775-08:00","closed_at":"2025-11-05T00:44:27.948777-08:00"}
{"id":"bd-9ae788be","content_hash":"19599f6bcc268e97438593e08eb6343b551ce765f0d91956591aa811cbb90690","title":"Implement clone-scoped ID allocation to prevent N-way collisions","description":"## Problem\nCurrent ID allocation uses per-clone atomic counters (issue_counters table) that sync based on local database state. In N-way collision scenarios:\n- Clone B sees {test-1} locally, allocates test-2\n- Clone D sees {test-1, test-2, test-3} locally, allocates test-4\n- When same content gets assigned test-2 and test-4, convergence fails\n\nRoot cause: Each clone independently allocates IDs without global coordination, leading to overlapping assignments for the same content.\n\n## Solution\nAdd clone UUID to ID allocation to make every ID globally unique:\n\n**Current format:** `test-1`, `test-2`, `test-3`\n**New format:** `test-1-a7b3`, `test-2-a7b3`, `test-3-c4d9`\n\nWhere suffix is first 4 chars of clone UUID.\n\n## Implementation\n\n### 1. Add clone_identity table\n```sql\nCREATE TABLE clone_identity (\n clone_uuid TEXT PRIMARY KEY,\n created_at DATETIME DEFAULT CURRENT_TIMESTAMP\n);\n```\n\n### 2. Modify getNextIDForPrefix()\n```go\nfunc (s *SQLiteStorage) getNextIDForPrefix(ctx context.Context, prefix string) (string, error) {\n cloneUUID := s.getOrCreateCloneUUID(ctx)\n shortUUID := cloneUUID[:4]\n \n nextNum := s.getNextCounterForPrefix(ctx, prefix)\n return fmt.Sprintf(\"%s-%d-%s\", prefix, nextNum, shortUUID), nil\n}\n```\n\n### 3. Update ID parsing logic\nAll places that parse IDs (utils.ExtractIssueNumber, etc.) need to handle new format.\n\n### 4. Migration strategy\n- Existing IDs remain unchanged (no suffix)\n- New IDs get clone suffix automatically\n- Display layer can hide suffix in UI: `bd-cb64c226.3-a7b3` → `#42`\n\n## Benefits\n- **Zero collision risk**: Same content in different clones gets different IDs\n- **Maintains readability**: Still sequential numbering within clone\n- **No coordination needed**: Works offline, no central authority\n- **Scales to 100+ clones**: 4-char hex = 65,536 unique clones\n\n## Concerns\n- ID format change may break existing integrations\n- Need migration path for existing databases\n- Display logic needs update to hide/show suffixes appropriately\n\n## Success Criteria\n- 10+ clone collision test passes without failures\n- Existing issues continue to work (backward compatibility)\n- Documentation updated with new ID format\n- Migration guide for v1.x → v2.x\n\n## Timeline\nMedium-term (v1.1-v1.2), 2-3 weeks implementation\n\n## References\n- Related to bd-e6d71828 (immediate fix)\n- See beads_nway_test.go for failing N-way tests","status":"open","priority":2,"issue_type":"feature","created_at":"2025-10-29T10:22:52.260524-07:00","updated_at":"2025-10-30T17:12:58.18193-07:00"}
{"id":"bd-9b13","content_hash":"9a17da93fb23cdcfcc294d2e7e00239973530ab8c5cc08f110112c9924ca94e1","title":"Backend task","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-03T19:11:59.359262-08:00","updated_at":"2025-11-05T00:25:06.484312-08:00","closed_at":"2025-11-05T00:25:06.484312-08:00","labels":["backend","week1"]}
{"id":"bd-9cdc","content_hash":"8fcd4366fd76c0db14c73d0c2623abae40ad4c31a2ca663c15f8d3d52ee572d0","title":"Update docs for import bug fix","description":"Update AGENTS.md, README.md, TROUBLESHOOTING.md with import.orphan_handling config documentation. Document resurrection behavior, tombstones, config modes. Add troubleshooting section for import failures with deleted parents.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-04T12:32:30.770415-08:00","updated_at":"2025-11-04T12:32:30.770415-08:00"}
{"id":"bd-9e23","content_hash":"fa94af8126d5d8c816a6f83d5ad191ebdb954687abb87ce30e4f67eee4f1a9ce","title":"Optimize Memory backend GetIssueByExternalRef with index","description":"Currently GetIssueByExternalRef in Memory storage uses O(n) linear search through all issues.\n\nCurrent code (memory.go:282-308):\nfor _, issue := range m.issues {\n if issue.ExternalRef != nil \u0026\u0026 *issue.ExternalRef == externalRef {\n return \u0026issueCopy, nil\n }\n}\n\nProposed optimization:\n- Add externalRefToID map[string]string to MemoryStorage\n- Maintain it in CreateIssue, UpdateIssue, DeleteIssue\n- Achieve O(1) lookup like SQLite's index\n\nImpact: Low (--no-db mode typically has smaller datasets)\nRelated: bd-1022","status":"open","priority":4,"issue_type":"chore","created_at":"2025-11-02T15:32:30.242357-08:00","updated_at":"2025-11-02T15:32:30.242357-08:00"}
@@ -131,8 +131,8 @@
{"id":"bd-9f1fce5d","content_hash":"14b0d330680e979e504043d2c560bd2eda204698f5622c3bdc6f91816f861d22","title":"Add internal/ai package for LLM integration","description":"Shared AI client for repair commands.\n\nProviders:\n- Anthropic (Claude)\n- OpenAI (GPT)\n- Ollama (local)\n\nEnv vars:\n- BEADS_AI_PROVIDER\n- BEADS_AI_API_KEY\n- BEADS_AI_MODEL\n\nFiles: internal/ai/client.go (new)","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-28T14:48:29.072473-07:00","updated_at":"2025-10-30T17:12:58.219706-07:00"}
{"id":"bd-9f20","content_hash":"fd9e463ab1b81e62f5ae1441e8c3a661361031a30e6a95502152bb4d7eecf7b2","title":"DetectCycles SQL query has bug preventing cycle detection","description":"The DetectCycles function's SQL query has a bug in the LIKE filter that prevents it from detecting cycles.\n\nCurrent code (line 571):\n```sql\nAND p.path NOT LIKE '%' || d.depends_on_id || '→%'\n```\n\nThis prevents ANY revisit to nodes, including returning to the start node to complete a cycle.\n\nFix:\n```sql\nAND (d.depends_on_id = p.start_id OR p.path NOT LIKE '%' || d.depends_on_id || '→%')\n```\n\nThis allows revisiting the start node (to detect the cycle) while still preventing intermediate node revisits.\n\nImpact: Currently DetectCycles cannot detect any cycles, but this hasn't been noticed because AddDependency prevents cycles from being created. The function would only matter if cycles were manually inserted into the database.","status":"closed","priority":3,"issue_type":"bug","created_at":"2025-11-01T22:50:32.552763-07:00","updated_at":"2025-11-01T22:52:02.247443-07:00","closed_at":"2025-11-01T22:52:02.247443-07:00"}
{"id":"bd-9f4a","content_hash":"ff058f9bad890bee6a00df24c846f523980473d47c702097164deea7504886a4","title":"Document external_ref in content hash behavior","description":"The content hash includes external_ref, which has implications that should be documented.\n\nCurrent behavior:\n- external_ref is included in content hash calculation (collision.go:158-160)\n- Changing external_ref changes content hash\n- This means: local issue → add external_ref → different hash\n\nImplications:\n- Local issue + external_ref addition = looks like 'new content'\n- May not match by content hash in some scenarios\n- Generally correct behavior, but subtle\n\nAction items:\n- Document in code comments\n- Add to ARCHITECTURE.md or similar\n- Add test demonstrating this behavior\n- Consider if this is desired long-term\n\nRelated: bd-1022\nFiles: internal/storage/sqlite/collision.go:158-160","status":"open","priority":4,"issue_type":"task","created_at":"2025-11-02T15:32:47.715458-08:00","updated_at":"2025-11-02T15:32:47.715458-08:00"}
{"id":"bd-a03d5e36","content_hash":"5d787e48552f83d1be969071dd66f4f17a62015ccf3b6a35c8459b8ec26c4563","title":"Improve integration test coverage for stateful features","description":"","design":"## Context\n\nbd-70419816 revealed a critical gap: the export deduplication feature had unit tests but no integration tests simulating real-world git operations. This led to silent data loss in production.\n\n## Root Cause\n- Unit tests only tested functions in isolation\n- No integration tests for git operations (pull, reset, checkout) modifying JSONL\n- No tests validating export_hashes and JSONL stay in sync\n- Missing tests for stateful distributed system interactions (DB + JSONL + git)\n\n## Completed (bd-70419816)\n✓ TestJSONLIntegrityValidation - unit tests for validation logic\n✓ TestImportClearsExportHashes - tests import clears hashes\n✓ TestExportIntegrityAfterJSONLTruncation - simulates git reset (would have caught bd-70419816)\n✓ TestExportIntegrityAfterJSONLDeletion - tests recovery from file deletion\n✓ TestMultipleExportsStayConsistent - tests repeated exports\n\n## Still Needed (High Priority)\n1. Multi-repo sync test - two clones staying in sync after push/pull\n2. Auto-flush integration test - JSONL integrity preserved during auto-flush\n3. Daemon auto-sync integration test - complex state management\n4. Import after corruption test - recovery from partial data loss\n\n## Medium Priority\n- Partial export failure handling (disk full, network interruption)\n- Concurrent export/import race conditions\n- Large dataset performance tests (1000+ issues)\n- Export hash migration tests (version upgrades)\n\n## Testing Principles\n1. Test real-world scenarios: git ops, user errors, system failures, concurrent ops\n2. Integration tests for stateful systems (DB + files + git)\n3. Regression test for every bug fix\n4. Test invariants: JSONL count == DB count, hash consistency, etc.\n\n## Key Lesson\nStateful distributed systems need integration tests, not just unit tests.","acceptance_criteria":"- [ ] Multi-repo sync test implemented\n- [ ] Auto-flush integration test implemented \n- [ ] Daemon auto-sync integration test implemented\n- [ ] Testing guidelines added to CONTRIBUTING.md\n- [ ] CI runs integration tests\n- [ ] All critical workflows have integration test coverage","status":"open","priority":2,"issue_type":"epic","created_at":"2025-10-29T21:53:15.397137-07:00","updated_at":"2025-10-30T17:12:58.206063-07:00"}
{"id":"bd-a101","content_hash":"9c8ac3184d936a5483d307ea72e34fa6308e99416b27c930c1b7b05660173f47","title":"Support separate branch for beads commits","description":"Allow beads to commit to a separate branch (e.g., beads-metadata) using git worktrees to support protected main branch workflows.\n\nSolves GitHub Issue #205 - Users need to protect main branch while maintaining beads workflow.\n\nKey advantages:\n- Works on any git platform\n- Main branch stays protected \n- No disruption to user's working directory\n- Backward compatible (opt-in via config)\n- Minimal disk overhead (sparse checkout)\n\nTotal estimate: 17-24 days (4-6 weeks with parallel work)","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-02T15:21:20.098247-08:00","updated_at":"2025-11-04T12:46:19.550641-08:00","closed_at":"2025-11-04T12:46:19.550646-08:00","external_ref":"GH-205"}
{"id":"bd-a03d5e36","content_hash":"b4ee73e439a133a77e5df27e3e457674dbc9968fdbee0dc630175726960bb8cf","title":"Improve integration test coverage for stateful features","description":"","design":"## Context\n\nbd-70419816 revealed a critical gap: the export deduplication feature had unit tests but no integration tests simulating real-world git operations. This led to silent data loss in production.\n\n## Root Cause\n- Unit tests only tested functions in isolation\n- No integration tests for git operations (pull, reset, checkout) modifying JSONL\n- No tests validating export_hashes and JSONL stay in sync\n- Missing tests for stateful distributed system interactions (DB + JSONL + git)\n\n## Completed (bd-70419816)\n✓ TestJSONLIntegrityValidation - unit tests for validation logic\n✓ TestImportClearsExportHashes - tests import clears hashes\n✓ TestExportIntegrityAfterJSONLTruncation - simulates git reset (would have caught bd-70419816)\n✓ TestExportIntegrityAfterJSONLDeletion - tests recovery from file deletion\n✓ TestMultipleExportsStayConsistent - tests repeated exports\n\n## Still Needed (High Priority)\n1. Multi-repo sync test - two clones staying in sync after push/pull\n2. Auto-flush integration test - JSONL integrity preserved during auto-flush\n3. Daemon auto-sync integration test - complex state management\n4. Import after corruption test - recovery from partial data loss\n\n## Medium Priority\n- Partial export failure handling (disk full, network interruption)\n- Concurrent export/import race conditions\n- Large dataset performance tests (1000+ issues)\n- Export hash migration tests (version upgrades)\n\n## Testing Principles\n1. Test real-world scenarios: git ops, user errors, system failures, concurrent ops\n2. Integration tests for stateful systems (DB + files + git)\n3. Regression test for every bug fix\n4. Test invariants: JSONL count == DB count, hash consistency, etc.\n\n## Key Lesson\nStateful distributed systems need integration tests, not just unit tests.","acceptance_criteria":"- [ ] Multi-repo sync test implemented\n- [ ] Auto-flush integration test implemented \n- [ ] Daemon auto-sync integration test implemented\n- [ ] Testing guidelines added to CONTRIBUTING.md\n- [ ] CI runs integration tests\n- [ ] All critical workflows have integration test coverage","status":"open","priority":2,"issue_type":"epic","created_at":"2025-10-29T21:53:15.397137-07:00","updated_at":"2025-10-30T17:12:58.206063-07:00"}
{"id":"bd-a101","content_hash":"805d60a6f4d9205a7e0498f63e9c0bd98a36eb86800304a123cd9122f694b5ab","title":"Support separate branch for beads commits","description":"Allow beads to commit to a separate branch (e.g., beads-metadata) using git worktrees to support protected main branch workflows.\n\nSolves GitHub Issue #205 - Users need to protect main branch while maintaining beads workflow.\n\nKey advantages:\n- Works on any git platform\n- Main branch stays protected \n- No disruption to user's working directory\n- Backward compatible (opt-in via config)\n- Minimal disk overhead (sparse checkout)\n\nTotal estimate: 17-24 days (4-6 weeks with parallel work)","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-02T15:21:20.098247-08:00","updated_at":"2025-11-04T12:36:53.772727-08:00","closed_at":"2025-11-04T12:36:53.772727-08:00","external_ref":"GH-205"}
{"id":"bd-a4b5","content_hash":"3966f6f9ab3202fe740f2936c7743f679ea42b75803c99465176ccf69ffd9dd7","title":"Implement git worktree management","description":"Create git worktree lifecycle management for separate beads branch.\n\nTasks:\n- Create internal/git/worktree.go\n- Implement CreateBeadsWorktree(branch, path)\n- Implement RemoveBeadsWorktree(path)\n- Implement CheckWorktreeHealth(path)\n- Configure sparse checkout (only .beads/)\n- Implement SyncJSONLToWorktree()\n- Handle worktree errors gracefully\n- Auto-cleanup on config change\n\nEstimated effort: 3-4 days","acceptance_criteria":"- Worktree created successfully on first use\n- Sparse checkout limits to .beads/ only\n- Health check detects and fixes broken worktrees\n- JSONL synced correctly before commits\n- Cleanup removes worktree completely","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.56423-08:00","updated_at":"2025-11-04T11:10:23.533053-08:00","closed_at":"2025-11-04T11:10:23.533055-08:00","dependencies":[{"issue_id":"bd-a4b5","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.359843-08:00","created_by":"stevey"}]}
{"id":"bd-a9699011","content_hash":"87d969cf57e247ebfac4f052a9ecbd1254bc55070b87b5ffb78a2b6ee2afddb6","title":"GH#146: No color showing in terminal for some users","description":"User reports color not working in macOS (Taho 26.0.1) with iTerm 3.6.4 and Terminal.app, despite color working elsewhere in terminal. Python rich and printf escape codes work.\n\nNeed to investigate:\n- Is NO_COLOR env var set?\n- Terminal type detection?\n- fatih/color library configuration\n- Does bd list show colors? bd ready? bd init?\n- What's the output of: echo $TERM, echo $NO_COLOR","status":"open","priority":2,"issue_type":"bug","created_at":"2025-10-24T22:26:36.22163-07:00","updated_at":"2025-10-30T17:12:58.2142-07:00","external_ref":"github:146"}
{"id":"bd-ad5e","content_hash":"67fdba1ba5b838384b16b82ff45e200cb5fd4960795bb5ae29d6fdec549170ca","title":"Add AI planning docs management guidance to bd onboard (GH-196)","description":"Enhanced bd onboard command to provide guidance for managing AI-generated planning documents (Claude slop).\n\nAddresses GitHub issue #196: https://github.com/steveyegge/beads/issues/196\n\nChanges:\n- Added Managing AI-Generated Planning Documents section to bd onboard\n- Recommends using history/ directory for ephemeral planning files\n- Updated AGENTS.md to demonstrate the pattern\n- Added comprehensive tests\n\nCommit: d46177d","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-02T17:11:33.183636-08:00","updated_at":"2025-11-02T17:12:05.599633-08:00","closed_at":"2025-11-02T17:12:05.599633-08:00"}
@@ -146,38 +146,37 @@
{"id":"bd-b5a3","content_hash":"d58f635721d24b7761782f83df452a67f794080d2c41cb4f6fad2f27ef2cf0b6","title":"Extract Daemon struct and config into internal/daemonrunner","description":"Create internal/daemonrunner with Config struct and Daemon struct. Move daemon runtime logic from cmd/bd/daemon.go Run function into Daemon.Start/Stop methods.","notes":"Refactoring complete! Created internal/daemonrunner package with:\n- Config struct (config.go)\n- Daemon struct with Start/Stop methods (daemon.go)\n- RPC server lifecycle (rpc.go)\n- Sync loop implementation (sync.go)\n- Git operations (git.go)\n- Process management (process.go, flock_*.go)\n- Logger setup (logger.go)\n- Platform-specific signal handling (signals_*.go)\n- Database fingerprint validation (fingerprint.go)\n\nBuild succeeds and most daemon tests pass. Import functionality still delegated to cmd/bd (marked with TODO(bd-b5a3)).","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.843103-07:00","updated_at":"2025-11-01T20:23:46.475885-07:00","closed_at":"2025-11-01T20:23:46.475888-07:00"}
{"id":"bd-b6b2","content_hash":"6d2b2f1bbec6b9aa956e5e84c6b78da699a72a487d2317c6533215d574d2209f","title":"Feature with design","description":"This is a description","design":"Use MVC pattern","acceptance_criteria":"All tests pass","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-10-31T21:40:34.612465-07:00","updated_at":"2025-11-04T11:10:23.533636-08:00","closed_at":"2025-11-04T11:10:23.533638-08:00"}
{"id":"bd-b7d2","content_hash":"cd78e03d80898095a2f7f56c7f000b50e9e3be7b2416797d11f4640e5a0e583a","title":"Add sync.branch configuration","description":"Add configuration layer to support sync.branch setting via config file, environment variable, or CLI flag.\n\nTasks:\n- Add sync.branch field to config schema\n- Add BEADS_SYNC_BRANCH environment variable\n- Add --branch flag to bd init\n- Add bd config get/set sync.branch commands\n- Validation (branch name format, conflicts)\n- Config migration for existing users\n\nEstimated effort: 1-2 days","acceptance_criteria":"- Can set sync.branch via config file, env var, or CLI\n- bd config get sync.branch returns configured value\n- Invalid branch names rejected with clear error\n- Backward compatible (empty = current branch)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.560141-08:00","updated_at":"2025-11-04T11:10:23.533911-08:00","closed_at":"2025-11-04T11:10:23.533913-08:00","dependencies":[{"issue_id":"bd-b7d2","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.356847-08:00","created_by":"stevey"}]}
{"id":"bd-b92a","content_hash":"01d8b852f1d9936835a253f6b9576c401cbd143772302b25ac859db79b6be76a","title":"Wire config to import pipeline","description":"Connect import.orphan_handling config to importer.go and sqlite validation functions. Pass mode flag through call chain. Implement all four modes (strict/resurrect/skip/allow) with proper error messages and logging.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:08.612142-08:00","updated_at":"2025-11-05T00:25:06.645376-08:00","closed_at":"2025-11-05T00:25:06.645376-08:00"}
{"id":"bd-b92a","content_hash":"01d8b852f1d9936835a253f6b9576c401cbd143772302b25ac859db79b6be76a","title":"Wire config to import pipeline","description":"Connect import.orphan_handling config to importer.go and sqlite validation functions. Pass mode flag through call chain. Implement all four modes (strict/resurrect/skip/allow) with proper error messages and logging.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:08.612142-08:00","updated_at":"2025-11-05T00:44:27.949021-08:00","closed_at":"2025-11-05T00:44:27.949024-08:00"}
{"id":"bd-bb08","content_hash":"6297b83658ee14e0a8cc77451ed25036cff62df65da013e0f63f37250f2313b1","title":"Add ON DELETE CASCADE to child_counters schema","description":"Update schema.go child_counters table foreign key with ON DELETE CASCADE. When parent deleted, child counter should also be deleted. If parent is resurrected, counter gets recreated from scratch. Add migration for existing databases.","status":"open","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:30.681452-08:00","updated_at":"2025-11-04T12:32:30.681452-08:00"}
{"id":"bd-bc2c6191","content_hash":"533e56b8628e24229a4beb52f8683355f6ca699e34a73650bf092003d73c2957","title":"Audit Current Cache Usage","description":"Understand exactly what code depends on the storage cache","acceptance_criteria":"- Document showing all cache dependencies\n- Confirmation that removing cache won't break MCP\n- List of tests that need updating\n\nFiles to examine:\n- internal/rpc/server_cache_storage.go (cache implementation)\n- internal/rpc/client.go (how req.Cwd is set)\n- internal/rpc/server_*.go (all getStorageForRequest calls)\n- integrations/beads-mcp/ (MCP multi-repo logic)\n\nTasks:\n- Document all callers of getStorageForRequest()\n- Verify req.Cwd is only set by RPC client for database discovery\n- Confirm MCP server doesn't rely on multi-repo cache behavior\n- Check if any tests assume multi-repo routing\n- Review environment variables: BEADS_DAEMON_MAX_CACHE_SIZE, BEADS_DAEMON_CACHE_TTL, BEADS_DAEMON_MEMORY_THRESHOLD_MB","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-27T23:02:43.506373-07:00","updated_at":"2025-10-31T20:36:49.334214-07:00"}
{"id":"bd-be7a","content_hash":"d9043a7a49f8e42dc88c3c01aaa178c1560b67c1637c3373b39c387272e8b725","title":"Create npm package structure with package.json","description":"Set up initial npm package structure for @beads/bd:\n\n## Files to create\n- npm/package.json - Package metadata, dependencies, scripts\n- npm/bin/bd - CLI wrapper script that invokes native binary\n- npm/.gitignore - Ignore downloaded binaries\n- npm/README.md - Installation and usage instructions\n\n## package.json structure\n- Name: @beads/bd (scoped package)\n- Main: index.js (exports binary path)\n- Bin: bin/bd (CLI entry point)\n- Scripts: postinstall (download binary)\n- Keywords: issue-tracker, cli, beads, bd\n- License: MIT\n\n## Bin wrapper\nSimple Node.js script that:\n- Spawns native binary with child_process.spawn\n- Passes through all arguments and stdio\n- Exits with binary's exit code","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T23:39:47.416779-08:00","updated_at":"2025-11-03T10:31:45.381258-08:00","closed_at":"2025-11-03T10:31:45.381258-08:00","dependencies":[{"issue_id":"bd-be7a","depends_on_id":"bd-febc","type":"parent-child","created_at":"2025-11-02T23:40:32.923859-08:00","created_by":"daemon"}]}
{"id":"bd-c13f","content_hash":"0e428b0589a6f763a32195b32241ec71141793101ee102df5df69d3c7fadfaaf","title":"Add unit tests for parent resurrection","description":"Test resurrection with deleted parent (should succeed), resurrection with never-existed parent (should fail gracefully), multi-level resurrection (bd-abc.1.2 with both parents missing). Verify tombstone creation and is_tombstone flag.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.325335-08:00","updated_at":"2025-11-05T00:08:38.197966-08:00","closed_at":"2025-11-05T00:08:38.19797-08:00"}
{"id":"bd-c13f","content_hash":"0e428b0589a6f763a32195b32241ec71141793101ee102df5df69d3c7fadfaaf","title":"Add unit tests for parent resurrection","description":"Test resurrection with deleted parent (should succeed), resurrection with never-existed parent (should fail gracefully), multi-level resurrection (bd-abc.1.2 with both parents missing). Verify tombstone creation and is_tombstone flag.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:21.325335-08:00","updated_at":"2025-11-05T00:08:42.813728-08:00","closed_at":"2025-11-05T00:08:42.813731-08:00"}
{"id":"bd-c362","content_hash":"3b9c44101d7f31fb6cbf4913873a4e140e74fbe7403907e8532bfaaabf875197","title":"Extract database search logic into helper function","description":"The logic for finding a database in a beads directory is duplicated:\n- FindDatabasePath() BEADS_DIR section (beads.go:141-169)\n- findDatabaseInTree() (beads.go:248-280)\n\nBoth implement the same search order:\n1. Check config.json first (single source of truth)\n2. Fall back to canonical beads.db\n3. Search for *.db files, filtering backups and vc.db\n\nRefactoring suggestion:\nExtract to a helper function like:\n func findDatabaseInBeadsDir(beadsDir string) string\n\nBenefits:\n- Single source of truth for database search logic\n- Easier to maintain and update search order\n- Reduces code duplication\n\nRelated to bd-e16b implementation.","status":"open","priority":3,"issue_type":"chore","created_at":"2025-11-02T18:34:02.831543-08:00","updated_at":"2025-11-02T18:34:02.831543-08:00","dependencies":[{"issue_id":"bd-c362","depends_on_id":"bd-e16b","type":"blocks","created_at":"2025-11-02T18:34:02.832607-08:00","created_by":"daemon"}]}
{"id":"bd-c77d","content_hash":"204eed7c89bcda47198a774340985706baf139c9e1a9f1311d7340dac2b64ec7","title":"Test SQLite WASM compatibility","description":"Verify modernc.org/sqlite works in WASM target. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Compile minimal SQLite test to WASM\n- [ ] Test database create/open operations\n- [ ] Test query execution\n- [ ] Test JSONL import/export\n- [ ] Benchmark performance vs native\n\n## Decision Point\nIf modernc.org/sqlite issues, evaluate ncruces/go-sqlite3 alternative.","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.247537-08:00","updated_at":"2025-11-05T00:47:14.361959-08:00","closed_at":"2025-11-05T00:47:14.361961-08:00","dependencies":[{"issue_id":"bd-c77d","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.248112-08:00","created_by":"daemon"}]}
{"id":"bd-c77d","content_hash":"204eed7c89bcda47198a774340985706baf139c9e1a9f1311d7340dac2b64ec7","title":"Test SQLite WASM compatibility","description":"Verify modernc.org/sqlite works in WASM target. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Compile minimal SQLite test to WASM\n- [ ] Test database create/open operations\n- [ ] Test query execution\n- [ ] Test JSONL import/export\n- [ ] Benchmark performance vs native\n\n## Decision Point\nIf modernc.org/sqlite issues, evaluate ncruces/go-sqlite3 alternative.","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.247537-08:00","updated_at":"2025-11-05T00:55:48.757762-08:00","closed_at":"2025-11-05T00:55:48.75777-08:00","dependencies":[{"issue_id":"bd-c77d","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.248112-08:00","created_by":"daemon"}]}
{"id":"bd-c796","content_hash":"7231785c8ce4d15ce296f7e2d22d03b9d6610ed73dcc5501773f86782ffeaf03","title":"Extract batch operations to batch_ops.go","description":"Move validateBatchIssues, generateBatchIDs, bulkInsertIssues, bulkRecordEvents, bulkMarkDirty, CreateIssues to batch_ops.go","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T19:28:54.887487-07:00","updated_at":"2025-11-02T08:09:51.579971-08:00","closed_at":"2025-11-02T08:09:51.579978-08:00"}
{"id":"bd-c7eb","content_hash":"8f98709ed61066b4e51c2f26d16c22278846cab66c7597df2bc892172b9a6ad6","title":"Research Go WASM compilation and modernc.org/sqlite WASM support","description":"Investigate technical requirements for compiling bd to WASM:\n- Verify modernc.org/sqlite has working js/wasm support\n- Identify Go stdlib limitations in WASM (syscalls, file I/O, etc.)\n- Research wasm_exec.js runtime and Node.js integration\n- Document any API differences between native and WASM builds","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T21:58:07.284264-08:00","updated_at":"2025-11-02T22:23:49.375941-08:00","closed_at":"2025-11-02T22:23:49.375941-08:00","dependencies":[{"issue_id":"bd-c7eb","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.378673-08:00","created_by":"stevey"}]}
{"id":"bd-c825f867","content_hash":"27cecaa2dc6cdabb2ae77fd65fbf8dca8f4c536bdf140a13b25cdd16376c9845","title":"Add docs/architecture/event_driven.md","description":"Copy event_driven_daemon.md into docs/ folder. Add to documentation index.","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-28T16:20:02.431399-07:00","updated_at":"2025-10-30T17:12:58.221939-07:00"}
{"id":"bd-c9a482db","content_hash":"35c1ad124187c21b4e8dae7db46ea5d00173d33234a9b815ded7dcf0ab51078e","title":"Add internal/ai package for AI-assisted repairs","description":"Add AI integration package to support AI-powered repair commands.\n\nProviders:\n- Anthropic (Claude)\n- OpenAI\n- Ollama (local)\n\nFeatures:\n- Conflict resolution analysis\n- Duplicate detection via embeddings\n- Configuration via env vars (BEADS_AI_PROVIDER, BEADS_AI_API_KEY, etc.)\n\nSee repair_commands.md lines 357-425 for design.","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-28T19:37:55.722841-07:00","updated_at":"2025-10-30T17:12:58.180177-07:00"}
{"id":"bd-caa9","content_hash":"6e8d4006d4f9b265e63fad9e30f24c6ab29fbf79ef47ec90a7e1225b5d662b67","title":"Migration tool for existing users","description":"Ensure smooth migration for existing users to separate branch workflow.\n\nTasks:\n- Add bd migrate --separate-branch command\n- Detect existing repos, migrate cleanly\n- Preserve git history\n- Add rollback mechanism\n- Test migration on beads' own repo (dogfooding)\n- Communication plan (GitHub discussion, docs)\n- Version compatibility checks\n\nEstimated effort: 2-3 days","acceptance_criteria":"- Existing users can migrate without data loss\n- Rollback works if migration fails\n- Clear communication about breaking changes (if any)\n- beads project itself migrated successfully (dogfooding)\n- Migration tested on 5+ real-world repos","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.627388-08:00","updated_at":"2025-11-04T12:46:19.551158-08:00","closed_at":"2025-11-04T12:46:19.551161-08:00","dependencies":[{"issue_id":"bd-caa9","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.382619-08:00","created_by":"stevey"}]}
{"id":"bd-caa9","content_hash":"aa97994c8474a1380ff7f9c9db681c6d6dda62839b1ddc13312a6813029b6404","title":"Migration tool for existing users","description":"Ensure smooth migration for existing users to separate branch workflow.\n\nTasks:\n- Add bd migrate --separate-branch command\n- Detect existing repos, migrate cleanly\n- Preserve git history\n- Add rollback mechanism\n- Test migration on beads' own repo (dogfooding)\n- Communication plan (GitHub discussion, docs)\n- Version compatibility checks\n\nEstimated effort: 2-3 days","acceptance_criteria":"- Existing users can migrate without data loss\n- Rollback works if migration fails\n- Clear communication about breaking changes (if any)\n- beads project itself migrated successfully (dogfooding)\n- Migration tested on 5+ real-world repos","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.627388-08:00","updated_at":"2025-11-04T12:36:53.789201-08:00","closed_at":"2025-11-04T12:36:53.789201-08:00","dependencies":[{"issue_id":"bd-caa9","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.382619-08:00","created_by":"stevey"}]}
{"id":"bd-cb2f","content_hash":"99b9c1c19d5e9f38308d78f09763426777797f133d4c86edd579419e7ba4043f","title":"Week 1 task","description":"","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T19:11:59.358093-08:00","updated_at":"2025-11-03T19:11:59.358093-08:00","labels":["frontend","week2"]}
{"id":"bd-cc03","content_hash":"f1e8dcfd29cd9830ae91a044a799a750085fc9139e822c656b0575fa132b9bfa","title":"Build Node.js CLI wrapper for WASM","description":"Create npm package that wraps bd.wasm. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Set up npm package structure (package.json)\n- [ ] Implement CLI argument parsing\n- [ ] Load and execute WASM module\n- [ ] Handle stdout/stderr correctly\n- [ ] Support --json flag for all commands\n- [ ] Add bd-wasm bin script\n\n## Success Criteria\n- bd-wasm ready --json works identically to bd\n- All core commands supported","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.310268-08:00","updated_at":"2025-11-05T00:47:14.362305-08:00","closed_at":"2025-11-05T00:47:14.362307-08:00","dependencies":[{"issue_id":"bd-cc03","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.311017-08:00","created_by":"daemon"}]}
{"id":"bd-cc4f","content_hash":"bf918bc22aedff9e04e09591d0469cdf508345a91a28b66f8ac2e35ab5c05949","title":"Implement TryResurrectParent function","description":"Create internal/storage/sqlite/resurrection.go with TryResurrectParent(ctx, parentID) function. Parse JSONL history to find deleted parent, create tombstone with status=deleted and is_tombstone=true flag. Handle recursive resurrection for multi-level missing parents (bd-abc.1.2 with missing bd-abc and bd-abc.1).","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:59.61107-08:00","updated_at":"2025-11-04T17:10:48.899955-08:00","closed_at":"2025-11-04T17:10:48.899955-08:00"}
{"id":"bd-cc03","content_hash":"f1e8dcfd29cd9830ae91a044a799a750085fc9139e822c656b0575fa132b9bfa","title":"Build Node.js CLI wrapper for WASM","description":"Create npm package that wraps bd.wasm. Child of epic bd-44d0.\n\n## Tasks\n- [ ] Set up npm package structure (package.json)\n- [ ] Implement CLI argument parsing\n- [ ] Load and execute WASM module\n- [ ] Handle stdout/stderr correctly\n- [ ] Support --json flag for all commands\n- [ ] Add bd-wasm bin script\n\n## Success Criteria\n- bd-wasm ready --json works identically to bd\n- All core commands supported","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-02T18:33:31.310268-08:00","updated_at":"2025-11-05T00:55:48.758194-08:00","closed_at":"2025-11-05T00:55:48.758198-08:00","dependencies":[{"issue_id":"bd-cc03","depends_on_id":"bd-197b","type":"blocks","created_at":"2025-11-02T18:33:31.311017-08:00","created_by":"daemon"}]}
{"id":"bd-cc4f","content_hash":"bf918bc22aedff9e04e09591d0469cdf508345a91a28b66f8ac2e35ab5c05949","title":"Implement TryResurrectParent function","description":"Create internal/storage/sqlite/resurrection.go with TryResurrectParent(ctx, parentID) function. Parse JSONL history to find deleted parent, create tombstone with status=deleted and is_tombstone=true flag. Handle recursive resurrection for multi-level missing parents (bd-abc.1.2 with missing bd-abc and bd-abc.1).","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:59.61107-08:00","updated_at":"2025-11-05T00:08:42.813998-08:00","closed_at":"2025-11-05T00:08:42.814-08:00"}
{"id":"bd-cdf7","content_hash":"50ba3c5bc3a0f06ebd20dd9b373086e0ecd218eea56a9edbef321f4e042115a4","title":"Add tests for DetectCycles to improve coverage from 29.6%","description":"DetectCycles currently has 29.6% coverage. Need comprehensive tests for:\n- Simple cycles (A-\u003eB-\u003eA)\n- Complex multi-node cycles\n- Acyclic graphs (should not detect cycles)\n- Self-loops\n- Multiple independent cycles\n- Edge cases (empty graph, single node)","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-01T22:40:58.977156-07:00","updated_at":"2025-11-01T22:52:02.243223-07:00","closed_at":"2025-11-01T22:52:02.243223-07:00"}
{"id":"bd-ce37850f","content_hash":"3ef2872c3fcb1e5acc90d33fd5a76291742cbcecfbf697b611aa5b4d8ce80078","title":"Add embedding generation for duplicate detection","description":"Use embeddings for scalable duplicate detection.\n\nModel: text-embedding-3-small (OpenAI) or all-MiniLM-L6-v2 (local)\nStorage: SQLite vector extension or in-memory\nCost: ~/bin/bash.0002 per 100 issues\n\nMuch cheaper than LLM comparisons for large databases.\n\nFiles: internal/embeddings/ (new package)","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-28T14:48:29.072913-07:00","updated_at":"2025-10-30T17:12:58.219921-07:00"}
{"id":"bd-ce75","content_hash":"025d43c12e9cc08c6d1db0b4a97f7a086a1a9f24f07769d48a7e2666d04ea217","title":"Test parent issue","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-02T11:50:37.759865-08:00","updated_at":"2025-11-02T11:50:47.308988-08:00","closed_at":"2025-11-02T11:50:47.308988-08:00"}
{"id":"bd-d19a","content_hash":"5ff9ba5e70c3e3eeaff40887421797e30dfb75e56e97fcaaf3f3d32332f22aa2","title":"Fix import failure on missing parent issues","description":"Import process fails atomically when JSONL references deleted parent issues. Implement hybrid solution: topological sorting + parent resurrection to handle deleted parents gracefully while maintaining referential integrity. See docs/import-bug-analysis-bd-3xq.md for full analysis.","status":"closed","priority":0,"issue_type":"epic","created_at":"2025-11-04T12:31:30.994759-08:00","updated_at":"2025-11-04T17:11:40.563983-08:00","closed_at":"2025-11-04T17:11:40.563983-08:00"}
{"id":"bd-d19a","content_hash":"5ff9ba5e70c3e3eeaff40887421797e30dfb75e56e97fcaaf3f3d32332f22aa2","title":"Fix import failure on missing parent issues","description":"Import process fails atomically when JSONL references deleted parent issues. Implement hybrid solution: topological sorting + parent resurrection to handle deleted parents gracefully while maintaining referential integrity. See docs/import-bug-analysis-bd-3xq.md for full analysis.","status":"closed","priority":0,"issue_type":"epic","created_at":"2025-11-04T12:31:30.994759-08:00","updated_at":"2025-11-05T00:08:42.814239-08:00","closed_at":"2025-11-05T00:08:42.814243-08:00"}
{"id":"bd-d33c","content_hash":"d0820d5dd6ea4ab198e013861d3d7d01da701daa8ab8ec59ad5ef855e6f83b2b","title":"Separate process/lock/PID concerns into process.go","description":"Create internal/daemonrunner/process.go with: acquireDaemonLock, PID file read/write, stopDaemon, isDaemonRunning, getPIDFilePath, socket path helpers, version check.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.871122-07:00","updated_at":"2025-11-01T23:43:55.66159-07:00","closed_at":"2025-11-01T23:43:55.66159-07:00"}
{"id":"bd-d355a07d","content_hash":"b4f98403e209eadf33dd4913660c1538fd922c89339a9ed034ef504aac358662","title":"Import validation falsely reports data loss on collision resolution","description":"## Problem\n\nPost-import validation reports 'data loss detected!' when import count reduces due to legitimate collision resolution.\n\n## Example\n\n```\nImport complete: 1 created, 8 updated, 142 unchanged, 19 skipped, 1 issues remapped\nPost-import validation failed: import reduced issue count: 165 → 164 (data loss detected!)\n```\n\nThis was actually successful collision resolution (bd-70419816 duplicated → remapped to-70419816), not data loss.\n\n## Impact\n\n- False alarms waste investigation time\n- Undermines confidence in import validation\n- Confuses users/agents about sync health\n\n## Solution\n\nImprove validation to distinguish:\n- Collision-resolution merges (expected count reduction)\n- Actual data loss (unexpected disappearance)\n\nTrack remapped issue count and adjust expected post-import count accordingly.","status":"open","priority":2,"issue_type":"bug","created_at":"2025-10-29T23:15:00.815227-07:00","updated_at":"2025-10-31T19:38:09.19996-07:00"}
{"id":"bd-d3e5","content_hash":"2eaf57cb617922924aadb6b04366a3ef058d386752c65e8471f2704b512ea30a","title":"Test issue 2","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T09:44:17.116768539Z","updated_at":"2025-11-02T09:45:20.780838695Z","closed_at":"2025-11-02T09:45:20.780838695Z"}
{"id":"bd-d3f0","content_hash":"d759327f1a1e4817d3e8ec212fd6af2607d0bb5e654201a6fc3640ad0a3b18fd","title":"Add 'bd comment' as alias for 'bd comments add'","description":"The command 'bd comments add' is verbose and unintuitive. Add 'bd comment' as a shorter alias that works the same way.\n\n## Rationale\n- More natural: 'bd comment \u003cissue-id\u003e \u003ctext\u003e' reads better than 'bd comments add \u003cissue-id\u003e \u003ctext\u003e'\n- Matches user expectations: users naturally try 'bd comment' first\n- Follows convention: other commands like 'bd create', 'bd show', 'bd close' are verbs\n\n## Implementation\nCould be implemented as:\n1. A new command that wraps bd comments add\n2. An alias registered in cobra\n3. Keep 'bd comments add' for backwards compatibility\n\n## Examples\n```bash\nbd comment bd-1234 'This is a comment'\nbd comment bd-1234 'Multi-line comment' --body 'Additional details here'\n```","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-02T17:13:18.82563-08:00","updated_at":"2025-11-03T22:20:30.223939-08:00","closed_at":"2025-11-03T22:20:30.223939-08:00"}
{"id":"bd-d4ec5a82","content_hash":"872448809bfa26d39d68ba6cac5071379756c30bcd3b08dc75de6da56c133956","title":"Add MCP functions for repair commands","description":"Add repair commands to beads-mcp for agent access:\n- beads_resolve_conflicts()\n- beads_find_duplicates()\n- beads_detect_pollution()\n- beads_validate()\n\nFiles: integrations/beads-mcp/src/beads_mcp/server.py","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-28T14:48:29.071495-07:00","updated_at":"2025-10-30T17:12:58.219499-07:00"}
{"id":"bd-d68f","content_hash":"1c806ae9c39bb28faaa8730350ce6b20bc25821e33583f537db1567b183bce6d","title":"Add tests for Comments API (AddIssueComment, GetIssueComments)","description":"Comments API currently has 0% coverage. Need tests for:\n- AddIssueComment - adding comments to issues\n- GetIssueComments - retrieving comments\n- Comment ordering and pagination\n- Edge cases (non-existent issues, empty comments)","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-01T22:40:58.980688-07:00","updated_at":"2025-11-01T22:53:42.124391-07:00","closed_at":"2025-11-01T22:53:42.124391-07:00"}
{"id":"bd-d76d","content_hash":"b65da5fe9f89a98f1e6fad6ee32d463126ef72785fec4d6dfa5a4774c6a8a393","title":"Modify EnsureIDs to support parent resurrection","description":"Update internal/storage/sqlite/ids.go:189-202 to call TryResurrectParent before failing on missing parent. Add resurrection mode flag, log resurrected parents for transparency. Maintain backwards compatibility with strict validation mode.","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:59.659507-08:00","updated_at":"2025-11-04T17:10:48.9102-08:00","closed_at":"2025-11-04T17:10:48.9102-08:00"}
{"id":"bd-d76d","content_hash":"b65da5fe9f89a98f1e6fad6ee32d463126ef72785fec4d6dfa5a4774c6a8a393","title":"Modify EnsureIDs to support parent resurrection","description":"Update internal/storage/sqlite/ids.go:189-202 to call TryResurrectParent before failing on missing parent. Add resurrection mode flag, log resurrected parents for transparency. Maintain backwards compatibility with strict validation mode.","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:59.659507-08:00","updated_at":"2025-11-05T00:08:42.814463-08:00","closed_at":"2025-11-05T00:08:42.814466-08:00"}
{"id":"bd-d7e88238","content_hash":"b69ec861618b03129fad7807b085ee6365860cfd2e9901b49eb846e192b95a0d","title":"Rapid 3","description":"","status":"open","priority":3,"issue_type":"task","created_at":"2025-10-29T19:11:57.459655-07:00","updated_at":"2025-10-30T17:12:58.189494-07:00"}
{"id":"bd-d9e0","content_hash":"de4e01414f8863b63cb693a709048b85c3f4417f03e7d7b2528560076be0e1f7","title":"Extract validation functions to validators.go","description":"Move validatePriority, validateStatus, validateIssueType, validateTitle, validateEstimatedMinutes, validateFieldUpdate to validators.go","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T19:28:54.915909-07:00","updated_at":"2025-11-02T12:32:00.159298-08:00","closed_at":"2025-11-02T12:32:00.1593-08:00"}
{"id":"bd-df11","content_hash":"aff6233eae39a337d6a49328284a56d6e553a6d52dc13ac4ab7a05d6d2033ce1","title":"Add import metrics for external_ref matching statistics","description":"Add observability for external_ref matching behavior during imports to help debug and optimize import operations.\n\nMetrics to track:\n- Number of issues matched by external_ref\n- Number of issues matched by ID\n- Number of issues matched by content hash\n- Number of external_ref updates vs creates\n- Average import time with vs without external_ref\n\nOutput format:\n- Add to ImportResult struct\n- Include in import command output\n- Consider structured logging\n\nUse cases:\n- Debugging slow imports\n- Understanding match distribution\n- Optimizing import performance\n\nRelated: bd-1022","status":"open","priority":4,"issue_type":"chore","created_at":"2025-11-02T15:32:46.157899-08:00","updated_at":"2025-11-02T15:32:46.157899-08:00"}
{"id":"bd-e044","content_hash":"8393c18d7f6edfed3d3e360a32a3075a9e0d9caa6f02d704774482aa1d9b0a7f","title":"Add mermaid output format for bd dep tree","description":"Add visual dependency graph output using Mermaid format for better visualization of issue relationships.\n\nExample usage:\n bd dep tree --format mermaid \u003cissue-id\u003e\n bd dep tree --format mermaid bd-42 \u003e graph.md\n\nThis would output Mermaid syntax that can be rendered in GitHub, documentation sites, or Mermaid live editor.\n\nImplementation notes:\n- Add --format flag to dep tree command\n- Support 'text' (default) and 'mermaid' formats\n- Mermaid graph should show issue IDs, titles, and dependency types\n- Consider using flowchart LR or graph TD syntax","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-03T18:10:18.978383-08:00","updated_at":"2025-11-03T20:55:06.696363-08:00","closed_at":"2025-11-03T20:55:06.69637-08:00"}
{"id":"bd-e05d","content_hash":"c2f4d60f5bd679d9bf609c35efc9c15e8dd52130fb9b68eacfe47bdda910ecd7","title":"Investigate and optimize test suite performance","description":"Test suite is taking very long to run (\u003e45s for cmd/bd tests, full suite timing unknown but was cancelled).\n\nThis impacts development velocity and CI/CD performance.\n\nInvestigation needed:\n- Profile which tests are slowest\n- Identify bottlenecks (disk I/O, network, excessive setup/teardown?)\n- Consider parallelization opportunities\n- Look for redundant test cases\n- Check if integration tests can be optimized","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T15:37:44.529955-08:00","updated_at":"2025-11-02T16:35:38.093133-08:00","closed_at":"2025-11-02T16:35:38.093137-08:00"}
{"id":"bd-e1085716","content_hash":"6b1f867ab07cbed86eae8ab342995691aac5b2bfe8fa6cdb869209e81f157d4e","title":"bd validate - Comprehensive health check","description":"Run all validation checks in one command.\n\nChecks:\n- Duplicates\n- Orphaned dependencies\n- Test pollution\n- Git conflicts\n\nSupports --fix-all for auto-repair.\n\nDepends on bd-cbed9619.1, bd-0dcea000, bd-31aab707, bd-9826b69a.\n\nFiles: cmd/bd/validate.go (new)","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-29T23:05:13.980679-07:00","updated_at":"2025-10-30T17:12:58.19736-07:00"}
{"id":"bd-e1085716","content_hash":"f180247fd30176bb37125a69c1c9361815d52e3437f930b81ec164d4cb92c4dd","title":"bd validate - Comprehensive health check","description":"Run all validation checks in one command.\n\nChecks:\n- Duplicates\n- Orphaned dependencies\n- Test pollution\n- Git conflicts\n\nSupports --fix-all for auto-repair.\n\nDepends on bd-cbed9619.1, bd-0dcea000, bd-31aab707, bd-9826b69a.\n\nFiles: cmd/bd/validate.go (new)","status":"open","priority":1,"issue_type":"task","created_at":"2025-10-29T23:05:13.980679-07:00","updated_at":"2025-10-30T17:12:58.19736-07:00"}
{"id":"bd-e166","content_hash":"000f4f9d069ffedceae13894d967ec30fa4a89e318bfcac4847f3c3b16d44a89","title":"Improve timestamp comparison readability in import","description":"The timestamp comparison logic uses double-negative which can be confusing:\n\nCurrent code:\nif !incoming.UpdatedAt.After(existing.UpdatedAt) {\n // skip update\n}\n\nMore readable:\nif incoming.UpdatedAt.After(existing.UpdatedAt) {\n // perform update\n} else {\n // skip (local is newer)\n}\n\nThis is a minor refactor for code clarity.\n\nRelated: bd-1022\nFiles: internal/importer/importer.go:411, 488","status":"open","priority":4,"issue_type":"chore","created_at":"2025-11-02T15:32:12.27108-08:00","updated_at":"2025-11-02T15:32:12.27108-08:00"}
{"id":"bd-e16b","content_hash":"969a580f09de305f494c160c21ad58b43e348320023eb990ecb8cf5395cccb6e","title":"Replace BEADS_DB with BEADS_DIR environment variable","description":"Implement BEADS_DIR as a replacement for BEADS_DB to point to the .beads directory instead of the database file directly.\n\nRationale:\n- With --no-db mode, there's no .db file to point to\n- The .beads directory is the logical unit (contains config.yaml, db files, jsonl files)\n- More intuitive: point to the beads directory not the database file\n\nImplementation:\n1. Add BEADS_DIR environment variable support\n2. Maintain backward compatibility with BEADS_DB\n3. Priority order: BEADS_DIR \u003e BEADS_DB \u003e auto-discovery\n4. If BEADS_DIR is set, look for config.yaml in that directory to find actual database path\n5. Update documentation and migration guide\n\nFiles to modify:\n- beads.go (FindDatabasePath function)\n- cmd/bd/main.go (initialization)\n- Documentation (CLI_REFERENCE.md, TROUBLESHOOTING.md, etc.)\n- MCP integration (integrations/beads-mcp/src/beads_mcp/config.py)\n\nTesting:\n- Ensure BEADS_DB still works (backward compatibility)\n- Test BEADS_DIR with both db and --no-db modes\n- Test priority order when both are set\n- Update integration tests\n\nRelated to GitHub issue #179","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-02T18:19:26.131948-08:00","updated_at":"2025-11-02T18:27:14.545162-08:00","closed_at":"2025-11-02T18:27:14.545162-08:00"}
{"id":"bd-e1d645e8","content_hash":"38eb74773fec37584ddaeb23f64a7ebbbb94893a2f1ab047740bf9f0cfca88c0","title":"Rapid 4","description":"","status":"open","priority":3,"issue_type":"task","created_at":"2025-10-29T19:11:57.484329-07:00","updated_at":"2025-10-30T17:12:58.189715-07:00"}
@@ -198,14 +197,16 @@
{"id":"bd-fd56","content_hash":"50437cea170f5b8a962661711d2ba639f9c7d1494a55115408afe3cbc9bebc86","title":"Wrap git operations in GitClient interface","description":"Create internal/daemonrunner/git.go with GitClient interface (HasUpstream, HasChanges, Commit, Push, Pull). Default implementation using os/exec. Use in Syncer and Run loop for testability.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.88734-07:00","updated_at":"2025-11-02T12:32:00.159595-08:00","closed_at":"2025-11-02T12:32:00.159597-08:00"}
{"id":"bd-fd8753d9","content_hash":"ae13fc833baa7d586a48ca62648dd4f0ee61fcc96aa1f238fb2639b6657b07da","title":"Document bd edit command and verify MCP exclusion","description":"Follow-up from PR #152:\n1. Add \"bd edit\" to AGENTS.md with \"Humans only\" note\n2. Verify MCP server doesn't expose bd edit command\n3. Consider adding test for command registration","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-26T13:23:47.982295-07:00","updated_at":"2025-10-30T17:12:58.226229-07:00"}
{"id":"bd-febc","content_hash":"686e0d5e3d56abe0edbd203d3d138ee3b013f55b6aed1eac05a56e6e3a5cc261","title":"npm package for bd with native binaries","description":"Create an npm package that wraps native bd binaries for easy installation in Claude Code for Web and other Node.js environments.\n\n## Problem\nClaude Code for Web sandboxes are full Linux VMs with npm support, but cannot easily download binaries from GitHub releases due to network restrictions or tooling limitations.\n\n## Solution\nPublish bd as an npm package that:\n- Downloads platform-specific native binaries during postinstall\n- Provides a CLI wrapper that invokes the native binary\n- Works seamlessly in Claude Code for Web SessionStart hooks\n- Maintains full feature parity (uses native SQLite)\n\n## Benefits vs WASM\n- ✅ Full SQLite support (no custom VFS needed)\n- ✅ All features work identically to native bd\n- ✅ Better performance (native vs WASM overhead)\n- ✅ ~4 hours effort vs ~2 days for WASM\n- ✅ Minimal maintenance burden\n\n## Success Criteria\n- npm install @beads/bd works in Claude Code for Web\n- All bd commands function identically to native binary\n- SessionStart hook documented for auto-installation\n- Package published to npm registry","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-02T23:39:37.684109-08:00","updated_at":"2025-11-03T10:39:44.932565-08:00","closed_at":"2025-11-03T10:39:44.932565-08:00"}
{"id":"bd-gdzd","content_hash":"0882387a9983d9ac3a68027d3ccc84f39856a92a7a46ff5626125bdd088d6f8b","title":"Import fails on same-content-different-ID instead of treating as update","description":"## Problem\n\nThe importer still has rename detection (importer.go:482-500) that triggers when same content hash has different IDs. With hash IDs, this shouldn't happen, but when it does (test data, bugs, legacy data), the import fails:\n\n```\nfailed to handle rename bd-ce75 -\u003e bd-5a90: rename collision handling removed - should not occur with hash IDs\n```\n\n## Current Behavior\n\n1. Importer finds same content hash with different IDs\n2. Calls handleRename() (line 490)\n3. handleRename() errors out (line 294): \"rename collision handling removed\"\n4. Import fails\n\n## Expected Behavior\n\nSame content hash + different IDs should be treated as an **update**, not a rename:\n- Keep existing ID (already in database)\n- Update fields if incoming has newer timestamp\n- Discard incoming ID (it's wrong - hash should have generated same ID)\n\n## Impact\n\n- Import fails on legitimate edge cases (test data, data corruption)\n- Cryptic error message\n- Blocks sync operations\n\n## Fix\n\nIn handleRename() or import loop, instead of erroring:\n```go\n// Same content, different ID - treat as update\nif incoming.UpdatedAt.After(existing.UpdatedAt) {\n existing.Status = incoming.Status\n // ... copy other fields\n s.UpdateIssue(ctx, existing)\n}\nresult.Updated++\n```\n\n## Files\n- internal/importer/importer.go:271-294 (handleRename)\n- internal/importer/importer.go:482-500 (rename detection)\n\n## Repro\nImport JSONL with bd-ce75 and bd-5a90 (both \"Test parent issue\" but different content hashes).","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-05T00:27:51.150233-08:00","updated_at":"2025-11-05T00:54:37.786903-08:00","closed_at":"2025-11-05T00:54:37.786903-08:00"}
{"id":"bd-gm7p","content_hash":"4bc3ca7545527e791e7282ad7596cb39f024e20fda1845c3498ffef1ba0100fd","title":"Use in-memory filesystem for test git operations","description":"Use tmpfs/ramdisk for git operations in tests to reduce I/O overhead.\n\nOptions:\n1. Mount /tmp as tmpfs in CI (GitHub Actions supports this)\n2. Use Go's testing.TB.TempDir() which may already use tmpfs on some systems\n3. Explicitly create ramdisk for tests on macOS\n\nExpected savings: 20-30% reduction in git operation time","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-04T01:24:19.803224-08:00","updated_at":"2025-11-04T12:27:51.428975-08:00","closed_at":"2025-11-04T12:27:51.428978-08:00","dependencies":[{"issue_id":"bd-gm7p","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:19.80414-08:00","created_by":"daemon"}]}
{"id":"bd-gdzd","content_hash":"54a68b8b4c63fd88b33dbf8239de070a3c95f97d4a0aa5f64e694ff1384199b3","title":"Import fails on same-content-different-ID instead of treating as update","description":"## Problem\n\nThe importer still has rename detection (importer.go:482-500) that triggers when same content hash has different IDs. With hash IDs, this shouldn't happen, but when it does (test data, bugs, legacy data), the import fails:\n\n```\nfailed to handle rename bd-ce75 -\u003e bd-5a90: rename collision handling removed - should not occur with hash IDs\n```\n\n## Current Behavior\n\n1. Importer finds same content hash with different IDs\n2. Calls handleRename() (line 490)\n3. handleRename() errors out (line 294): \"rename collision handling removed\"\n4. Import fails\n\n## Expected Behavior\n\nSame content hash + different IDs should be treated as an **update**, not a rename:\n- Keep existing ID (already in database)\n- Update fields if incoming has newer timestamp\n- Discard incoming ID (it's wrong - hash should have generated same ID)\n\n## Impact\n\n- Import fails on legitimate edge cases (test data, data corruption)\n- Cryptic error message\n- Blocks sync operations\n\n## Fix\n\nIn handleRename() or import loop, instead of erroring:\n```go\n// Same content, different ID - treat as update\nif incoming.UpdatedAt.After(existing.UpdatedAt) {\n existing.Status = incoming.Status\n // ... copy other fields\n s.UpdateIssue(ctx, existing)\n}\nresult.Updated++\n```\n\n## Files\n- internal/importer/importer.go:271-294 (handleRename)\n- internal/importer/importer.go:482-500 (rename detection)\n\n## Repro\nImport JSONL with bd-ce75 and bd-5a90 (both \"Test parent issue\" but different content hashes).","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-05T00:27:51.150233-08:00","updated_at":"2025-11-05T01:02:54.469971-08:00","closed_at":"2025-11-05T01:02:54.469979-08:00"}
{"id":"bd-gm7p","content_hash":"d4dacf54914a11edf556f347af9f225034fba0c0509ce5bd6349bb8a35e956a6","title":"Use in-memory filesystem for test git operations","description":"Use tmpfs/ramdisk for git operations in tests to reduce I/O overhead.\n\nOptions:\n1. Mount /tmp as tmpfs in CI (GitHub Actions supports this)\n2. Use Go's testing.TB.TempDir() which may already use tmpfs on some systems\n3. Explicitly create ramdisk for tests on macOS\n\nExpected savings: 20-30% reduction in git operation time","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-04T01:24:19.803224-08:00","updated_at":"2025-11-04T10:52:42.722474-08:00","closed_at":"2025-11-04T10:52:42.722474-08:00","dependencies":[{"issue_id":"bd-gm7p","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:19.80414-08:00","created_by":"daemon"}]}
{"id":"bd-gpe7","content_hash":"b7bec11644755a06b8d3510648bc9ed7f9ac5145c9fa789f5cf41f8af4d9ff22","title":"Tests take too long - unacceptable for project size","description":"## Problem\n\nRunning `go test ./internal/importer/... -v` takes an unacceptably long time (minutes). For a project this size, tests should complete in seconds.\n\n## Impact\n\n- Slows down development iteration\n- AI agents waste time waiting for tests\n- Blocks rapid bug fixes and validation\n- Poor developer experience\n\n## Investigation Needed\n\n- Profile which tests are slow\n- Check for unnecessary sleeps, timeouts, or integration tests\n- Look for tests that could be parallelized\n- Consider splitting unit vs integration tests\n\n## Goal\n\nTest suite for a single package should complete in \u003c5 seconds, ideally \u003c2 seconds.","status":"open","priority":0,"issue_type":"bug","created_at":"2025-11-05T00:54:47.784504-08:00","updated_at":"2025-11-05T00:54:47.784504-08:00"}
{"id":"bd-k58","content_hash":"cc90fb20e7bd178b52133d4d0f8781dce2debb46519674ae6356291d597fc13d","title":"Proposal workflow (propose/withdraw/accept)","description":"Implement commands and state machine for moving issues between personal planning repos and canonical upstream repos, enabling contributors to propose work without polluting PRs.","design":"Commands:\n- bd propose \u003cid\u003e [--target \u003crepo\u003e] - Move issue to target repo\n- bd withdraw \u003cid\u003e - Un-propose (move back)\n- bd accept \u003cid\u003e - Maintainer accepts proposal\n\nVisibility states:\n- local: Personal planning only\n- proposed: Staged for upstream PR\n- canonical: Accepted by upstream (default for existing)\n\nOptional visibility field (backward compatible, defaults to canonical)","acceptance_criteria":"1. bd propose moves issue from planning to primary repo\n2. bd withdraw reverses proposal\n3. bd accept (maintainer) finalizes acceptance\n4. Visibility field tracks state (local/proposed/canonical)\n5. Backward compatible - existing issues default to canonical\n6. State transitions are atomic and git-tracked","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:41.113647-08:00","updated_at":"2025-11-05T00:08:38.19821-08:00","closed_at":"2025-11-05T00:08:38.198213-08:00","dependencies":[{"issue_id":"bd-k58","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:21.811261-08:00","created_by":"daemon"}]}
{"id":"bd-k58","content_hash":"cc90fb20e7bd178b52133d4d0f8781dce2debb46519674ae6356291d597fc13d","title":"Proposal workflow (propose/withdraw/accept)","description":"Implement commands and state machine for moving issues between personal planning repos and canonical upstream repos, enabling contributors to propose work without polluting PRs.","design":"Commands:\n- bd propose \u003cid\u003e [--target \u003crepo\u003e] - Move issue to target repo\n- bd withdraw \u003cid\u003e - Un-propose (move back)\n- bd accept \u003cid\u003e - Maintainer accepts proposal\n\nVisibility states:\n- local: Personal planning only\n- proposed: Staged for upstream PR\n- canonical: Accepted by upstream (default for existing)\n\nOptional visibility field (backward compatible, defaults to canonical)","acceptance_criteria":"1. bd propose moves issue from planning to primary repo\n2. bd withdraw reverses proposal\n3. bd accept (maintainer) finalizes acceptance\n4. Visibility field tracks state (local/proposed/canonical)\n5. Backward compatible - existing issues default to canonical\n6. State transitions are atomic and git-tracked","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:41.113647-08:00","updated_at":"2025-11-05T00:08:42.814698-08:00","closed_at":"2025-11-05T00:08:42.814699-08:00","dependencies":[{"issue_id":"bd-k58","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:21.811261-08:00","created_by":"daemon"}]}
{"id":"bd-ktng","content_hash":"0a09f3e1549a70817f23aa57444811aaf18683ff9336944ff6e8c277ac5684b4","title":"Optimize CLI test suite - eliminate redundant git init calls","description":"Current: Each of 13 CLI tests calls git init (31s total). Solution: Use single test binary built once in init(), skip git operations where possible, or use mock filesystem.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-04T11:23:13.660276-08:00","updated_at":"2025-11-04T11:23:13.660276-08:00","dependencies":[{"issue_id":"bd-ktng","depends_on_id":"bd-l5gq","type":"discovered-from","created_at":"2025-11-04T11:23:13.662102-08:00","created_by":"daemon"}]}
{"id":"bd-l5gq","content_hash":"9c6f895c8e0066874073474fded02d3b1b10a008c3448f1e650e2ff39b5e8e02","title":"Optimize test suite performance - cut runtime by 50%+","description":"## Problem\nTest suite takes ~20.8 seconds, with 95% of time spent in just 2 tests:\n- TestHashIDs_MultiCloneConverge: 11.08s (53%)\n- TestHashIDs_IdenticalContentDedup: 8.78s (42%)\n\nBoth tests in beads_hash_multiclone_test.go perform extensive Git operations (bare repos, multiple clones, sync rounds).\n\n## Goal\nCut total test time by at least 50% (to ~10 seconds or less).\n\n## Analysis\nTests already have some optimizations:\n- --shared --depth=1 --no-tags for fast cloning\n- Disabled hooks, gc, fsync\n- Support -short flag\n\n## Impact\n- Faster development feedback loop\n- Reduced CI costs and time\n- Better developer experience","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-11-04T01:23:14.410648-08:00","updated_at":"2025-11-04T12:27:51.43013-08:00","closed_at":"2025-11-04T12:27:51.430134-08:00"}
{"id":"bd-pdwz","content_hash":"5c35a877ec5fa3af14a45a920764e7a4c289f93c427a479da7b335c068195af0","title":"Add t.Parallel() to slow hash multiclone tests","description":"Add t.Parallel() to TestHashIDs_MultiCloneConverge and TestHashIDs_IdenticalContentDedup so they run concurrently.\n\nExpected savings: ~10 seconds (from 20s to ~11s)\n\nImplementation:\n- Add t.Parallel() call at start of each test function\n- Verify tests don't share resources that would cause conflicts\n- Run tests to confirm they work in parallel\n\nFile: beads_hash_multiclone_test.go:34, :101","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T01:24:15.705228-08:00","updated_at":"2025-11-04T09:52:31.945545-08:00","closed_at":"2025-11-04T09:52:31.945545-08:00","dependencies":[{"issue_id":"bd-pdwz","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:15.706149-08:00","created_by":"daemon"}]}
{"id":"bd-l5gq","content_hash":"b485239aea61b3265f1be077398e6cade0e35cb6049f5ba829adf4c3dab43f77","title":"Optimize test suite performance - cut runtime by 50%+","description":"## Problem\nTest suite takes ~20.8 seconds, with 95% of time spent in just 2 tests:\n- TestHashIDs_MultiCloneConverge: 11.08s (53%)\n- TestHashIDs_IdenticalContentDedup: 8.78s (42%)\n\nBoth tests in beads_hash_multiclone_test.go perform extensive Git operations (bare repos, multiple clones, sync rounds).\n\n## Goal\nCut total test time by at least 50% (to ~10 seconds or less).\n\n## Analysis\nTests already have some optimizations:\n- --shared --depth=1 --no-tags for fast cloning\n- Disabled hooks, gc, fsync\n- Support -short flag\n\n## Impact\n- Faster development feedback loop\n- Reduced CI costs and time\n- Better developer experience","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-11-04T01:23:14.410648-08:00","updated_at":"2025-11-04T11:23:13.683213-08:00","closed_at":"2025-11-04T11:23:13.683213-08:00"}
{"id":"bd-o43","content_hash":"da285ab01b4f4bce19f609b006c338d268fd520f103594b37c43d339f3e3a79e","title":"Add richer query capabilities to bd list","description":"Current bd list filters are limited to basic field matching (status, priority, type, assignee, label). This forces users to resort to piping through jq for common queries.\n\nMissing query capabilities:\n- Pattern matching: --title-contains, --desc-contains\n- Date ranges: --created-after, --updated-before, --closed-after\n- Empty/null checks: --empty-description, --no-assignee, --no-labels\n- Numeric ranges: --priority-min, --priority-max\n- Complex boolean logic: --and, --or operators\n- Full-text search: --search across all text fields\n- Negation: --not-status, --exclude-label\n\nExample use cases:\n- Find issues with empty descriptions\n- Find stale issues not updated in 30 days\n- Find high-priority bugs with no assignee\n- Search for keyword across title/description/notes\n\nImplementation approach:\n- Add query builder pattern to storage layer\n- Support --query DSL for complex queries\n- Keep simple flags for common cases\n- Add --json output for programmatic use","notes":"## Progress Update\n\n**Completed:**\n- ✅ Extended IssueFilter struct with new fields (pattern matching, date ranges, empty/null checks, priority ranges)\n- ✅ Updated SQLite SearchIssues implementation \n- ✅ Added CLI flags to list.go\n- ✅ Added parseTimeFlag helper\n- ✅ Comprehensive tests added - all passing\n\n**Remaining:**\n- ⚠️ RPC layer needs updating (internal/rpc/protocol.go ListArgs)\n- ⚠️ Daemon handler needs to forward new filters\n- ⚠️ End-to-end testing with daemon mode\n- 📝 Documentation updates\n\n**Files Modified:**\n- internal/types/types.go\n- internal/storage/sqlite/sqlite.go \n- cmd/bd/list.go\n- cmd/bd/list_test.go\n\n**Next Steps:**\n1. Update RPC protocol\n2. Update daemon handler \n3. Test with daemon mode\n4. Update docs","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-05T00:17:48.677493-08:00","updated_at":"2025-11-05T00:33:38.998433-08:00","closed_at":"2025-11-05T00:33:38.998433-08:00"}
{"id":"bd-pdwz","content_hash":"f76d63fc1bef4ab993800f94abc68e2fa717bc4932a65ee226414917d8654090","title":"Add t.Parallel() to slow hash multiclone tests","description":"Add t.Parallel() to TestHashIDs_MultiCloneConverge and TestHashIDs_IdenticalContentDedup so they run concurrently.\n\nExpected savings: ~10 seconds (from 20s to ~11s)\n\nImplementation:\n- Add t.Parallel() call at start of each test function\n- Verify tests don't share resources that would cause conflicts\n- Run tests to confirm they work in parallel\n\nFile: beads_hash_multiclone_test.go:34, :101","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T01:24:15.705228-08:00","updated_at":"2025-11-04T09:52:31.945545-08:00","closed_at":"2025-11-04T09:52:31.945545-08:00","dependencies":[{"issue_id":"bd-pdwz","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:15.706149-08:00","created_by":"daemon"}]}
{"id":"bd-s02","content_hash":"911d456e4dabae028dd615b643c99058ef12e55ea523cb81cc933783c7b13546","title":"Manual task","description":"","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T20:15:10.022202-08:00","updated_at":"2025-11-03T20:15:10.022202-08:00"}
{"id":"bd-u8j","content_hash":"03131b068616b353b1f6c5d96a39f50680bf296629671060a7a364e76e049485","title":"Clarify exclusive lock protocol compatibility with multi-repo","description":"The contributor-workflow-analysis.md proposes per-repo file locking (Decision #7) using flock on JSONL files. However, VC (a downstream library consumer) uses an exclusive lock protocol (vc-195, requires Beads v0.17.3+) that allows bd daemon and VC executor to coexist.\n\nNeed to clarify:\n- Does the proposed per-repo file locking work with VC's existing exclusive lock protocol?\n- Do library consumers like VC need to adapt their locking logic?\n- Can multiple repos be locked atomically for cross-repo operations?\n\nContext: contributor-workflow-analysis.md lines 662-681","acceptance_criteria":"- Documentation explicitly states compatibility or incompatibility with existing lock protocols\n- If incompatible, migration path is documented for library consumers\n- If compatible, example showing coexistence is provided","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T20:24:08.257493-08:00","updated_at":"2025-11-03T20:24:08.257493-08:00"}
{"id":"bd-wta","content_hash":"59b0c71f52b597b32340bf5675c0a5efa281d08ffcac72bb3ee7b6e6df58b4cf","title":"Add performance benchmarks for multi-repo hydration","description":"The contributor-workflow-analysis.md asserts sub-second queries (line 702) and describes smart caching via file mtime tracking (Decision #4, lines 584-618), but doesn't provide concrete performance benchmarks.\n\nVC's requirement (from VC feedback section):\n- Executor polls GetReadyWork() every 5-10 seconds\n- Queries must be sub-second (ideally \u003c100ms)\n- Smart caching must avoid re-parsing JSONLs on every query\n\nSuggested performance targets to validate:\n- File stat overhead: \u003c1ms per repo\n- Hydration (when needed): \u003c500ms for typical JSONL (\u003c25k)\n- Query (from cache): \u003c10ms\n- Total GetReadyWork(): \u003c100ms (VC's requirement)\n\nAlso test at scale:\n- N=1 repo (baseline)\n- N=3 repos (typical)\n- N=10 repos (edge case)\n\nThese benchmarks are critical for library consumers like VC that run automated polling loops.","acceptance_criteria":"- Performance benchmark suite created for multi-repo hydration\n- Benchmarks cover file stat, hydration, and query times\n- Tests at N=1, N=3, N=10 repo scales\n- Results documented in contributor-workflow-analysis.md\n- Performance targets met or issues filed for optimization","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T20:24:39.331528-08:00","updated_at":"2025-11-03T20:24:39.331528-08:00"}
{"id":"bd-x47","content_hash":"1add411c4d4919dd7179e4e944ebbd9ec3b4672b93f9f6c303ab8fe512e66d09","title":"Add guidance for self-hosting projects","description":"The contributor-workflow-analysis.md is optimized for OSS contributors making PRs to upstream projects. However, it doesn't address projects like VC that use beads for their own development (self-hosting).\n\nSelf-hosting projects differ from OSS contributors:\n- No upstream/downstream distinction (they ARE the project)\n- May run automated executors (not just humans)\n- In bootstrap/early phase (stability matters)\n- Single team/owner (not multiple contributors with permissions)\n\nGuidance needed on:\n- When self-hosting projects should stay single-repo (default, recommended)\n- When they should adopt multi-repo (team planning, multi-phase dev)\n- How automated executors should handle multi-repo (if at all)\n- Special considerations for projects in bootstrap phase\n\nExamples of self-hosting projects: VC (building itself with beads), internal tools, pet projects","acceptance_criteria":"- Section added: 'For Projects Using Beads for Self-Hosting'\n- Clear guidance on when to stay single-repo vs adopt multi-repo\n- Recommendations for automated executor behavior with multi-repo\n- Bootstrap phase considerations documented","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T20:24:27.805341-08:00","updated_at":"2025-11-03T20:24:27.805341-08:00"}
{"id":"bd-zkl","content_hash":"cb299b73577814802df3a99dc6c100be59b62cad83511abf65015ca3b66a2f33","title":"Add tests for daemon vs non-daemon parity in list filters","description":"After bd-o43 RPC integration, we need tests to verify daemon mode behaves identically to direct mode for all new filter flags.\n\nTest coverage needed:\n- Pattern matching: --title-contains, --desc-contains, --notes-contains\n- Date ranges: all 6 date filter flags (created/updated/closed after/before)\n- Empty/null checks: --empty-description, --no-assignee, --no-labels\n- Priority ranges: --priority-min, --priority-max\n- Status normalization: --status all vs no status flag\n- Date parsing: YYYY-MM-DD, RFC3339, and error cases\n- Backward compat: deprecated --label flag still works\n\nOracle review findings (bd-o43):\n- Date parsing should support multiple formats\n- Status 'all' should be treated as unset\n- NoLabels field was missing from RPC protocol\n- Error messages should be clear and actionable\n\nTest approach:\n- Create RPC integration tests in internal/rpc/server_issues_epics_test.go\n- Compare daemon client.List() vs direct store.SearchIssues() for same filters\n- Verify error messages match between modes\n- Test with real daemon instance, not just unit tests","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T00:43:53.369457-08:00","updated_at":"2025-11-05T00:55:31.318526-08:00","closed_at":"2025-11-05T00:55:31.318526-08:00","dependencies":[{"issue_id":"bd-zkl","depends_on_id":"bd-o43","type":"discovered-from","created_at":"2025-11-05T00:43:53.371274-08:00","created_by":"daemon"}]}