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bd daemon sync: 2026-01-08 14:29:36

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emma
2026-01-08 14:29:36 -08:00
committed by Steve Yegge
parent efc234e267
commit 40463988b2
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@@ -145,7 +145,7 @@
{"id":"bd-2c5a","title":"Investigate why test issues persist in database","description":"Test issues (bd-0do3, bd-cjxp, bd-phr2, etc.) keep appearing in ready/list output, cluttering real work. These appear to be leftover test data from test runs.\n\nNeed to investigate:\n1. Why are test issues not being cleaned up after tests?\n2. Are tests creating issues in the main database instead of test databases?\n3. Should we add better test isolation or cleanup hooks?\n4. Can we add a label/prefix to distinguish test issues from real issues?\n\nThese test issues have characteristics:\n- Empty descriptions\n- Generic titles like \"Test issue 0\", \"Bug P0\", \"Issue to reopen with reason\"\n- Created around 2025-11-07 19:00-19:07\n- Some assigned to test users like \"alice\", \"bob\", \"testuser\"","notes":"## Root Cause Analysis\n\n**Problem**: Python MCP integration tests created test issues in production `.beads/beads.db` instead of isolated test databases.\n\n**Evidence**:\n- 29 test issues created on Nov 7, 2025 at 19:00-19:07\n- Patterns: \"Bug P0\", \"Test issue X\", assignees \"alice\"/\"bob\"/\"testuser\"\n- Git commit 0e8936b shows test issues committed to .beads/beads.jsonl\n- Tests were being fixed for workspace isolation around the same time\n\n**Why It Happened**:\n1. Before commit 0e8936b, `test_client_lazy_initialization()` didn't set `BEADS_WORKING_DIR`\n2. Tests fell back to discovering `.beads/` in the project root directory\n3. Auto-sync committed test issues to production database\n\n**Resolution**:\n1. ✅ Closed 29 test pollution issues (bd-0do3, bd-cjxp, etc.)\n2. ✅ Added `failIfProductionDatabase()` guard in Go test helpers\n3. ✅ Added production pollution checks in RPC test setup\n4. ✅ Created `conftest.py` with pytest safety checks for Python tests\n5. ✅ Added `BEADS_TEST_MODE` env var to mark test execution\n6. ✅ Tests now fail fast if they detect production database usage\n\n**Prevention**:\n- All test helper functions now verify database paths are in temp directories\n- Python tests fail immediately if BEADS_DB points to production\n- BEADS_TEST_MODE flag helps identify test vs production execution\n- Clear error messages guide developers to use proper test isolation\n\n**Files Modified**:\n- cmd/bd/test_helpers_test.go - Added failIfProductionDatabase()\n- internal/rpc/rpc_test.go - Added temp directory verification\n- integrations/beads-mcp/tests/conftest.py - New file with pytest safeguards","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-07T21:31:34.845887-08:00","updated_at":"2025-11-07T21:57:30.892086-08:00","closed_at":"2025-11-07T21:57:30.892086-08:00"}
{"id":"bd-2c64","title":"Merge: ruby-1767142029451","description":"branch: polecat/ruby-1767142029451\ntarget: main\nsource_issue: ruby-1767142029451\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-30T17:00:14.136568-08:00","created_by":"beads/polecats/ruby","updated_at":"2025-12-30T18:12:30.96303-08:00","closed_at":"2025-12-30T18:11:07.842778-08:00"}
{"id":"bd-2cvu","title":"Update AGENTS.md with Agent Mail workflow","description":"Update agent workflow section to include Agent Mail coordination as optional step.\n\nAcceptance Criteria:\n- Add Agent Mail to recommended workflow\n- Show both with/without examples\n- Update \"Multi-Agent Patterns\" section\n- Cross-reference to AGENT_MAIL.md\n\nFile: AGENTS.md (lines 468-475)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-07T22:42:51.295729-08:00","updated_at":"2025-11-08T00:52:34.288915-08:00","closed_at":"2025-11-08T00:52:34.288915-08:00","dependencies":[{"issue_id":"bd-2cvu","depends_on_id":"bd-xzrv","type":"blocks","created_at":"2025-11-07T23:04:09.773656-08:00","created_by":"daemon"}]}
{"id":"bd-2cwz0","title":"Review PR #16199: Update documentation link","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16199 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16199\nAuthor: tnspacetime\n\nFix doc link in README.\n- gh pr view 16199 --repo anthropics/claude-code\n- gh pr diff 16199 --repo anthropics/claude-code\n- If good: gh pr merge 16199 --repo anthropics/claude-code --squash","status":"hooked","priority":2,"issue_type":"task","assignee":"beads/crew/giles","created_at":"2026-01-08T14:20:06.638366-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:22:20.76942-08:00"}
{"id":"bd-2cwz0","title":"Review PR #16199: Update documentation link","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16199 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16199\nAuthor: tnspacetime\n\nFix doc link in README.\n- gh pr view 16199 --repo anthropics/claude-code\n- gh pr diff 16199 --repo anthropics/claude-code\n- If good: gh pr merge 16199 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/giles","created_at":"2026-01-08T14:20:06.638366-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.599125-08:00","closed_at":"2026-01-08T14:29:35.599125-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-2d5r","title":"Fix silent error handling in RPC response writing","description":"Marshal and write errors silently ignored in writeResponse, can send partial JSON and hang clients.\n\nLocation: internal/rpc/server_lifecycle_conn.go:228-232\n\nProblem:\n- json.Marshal error ignored - cyclic reference sends corrupt JSON\n- Write error ignored - connection closed, no indication to caller \n- WriteByte error ignored - client hangs waiting for newline\n- Flush error ignored - partial data buffered\n\nCurrent code:\nfunc (s *Server) writeResponse(writer *bufio.Writer, resp Response) {\n data, _ := json.Marshal(resp) // Ignored!\n _, _ = writer.Write(data) // Ignored!\n _ = writer.WriteByte('\\n') // Ignored!\n _ = writer.Flush() // Ignored!\n}\n\nSolution: Return errors, handle in caller, close connection on error\n\nImpact: Client hangs waiting for response; corrupt JSON sent\n\nEffort: 1 hour","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-16T14:51:47.002242-08:00","updated_at":"2025-11-16T15:04:00.481507-08:00","closed_at":"2025-11-16T15:04:00.481507-08:00"}
{"id":"bd-2dm49","title":"Session ended: gt-beads-crew-grip","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-07T17:42:57.665686-08:00","created_by":"beads/crew/grip","updated_at":"2026-01-07T17:42:57.71078-08:00","closed_at":"2026-01-07T17:42:57.71078-08:00","close_reason":"auto-closed session event"}
{"id":"bd-2dwo","title":"Remove deprecated daemon logger function","description":"In cmd/bd/daemon_logger.go:131, there's a TODO to remove a deprecated function once all callers are updated to use the new signature. Need to audit callers and clean up.\n\nFile: cmd/bd/daemon_logger.go:131","status":"closed","priority":4,"issue_type":"chore","created_at":"2025-12-28T16:32:39.513622-08:00","created_by":"stevey","updated_at":"2025-12-30T15:44:43.365401-08:00","closed_at":"2025-12-30T00:28:06.54315-08:00","close_reason":"Merged via refinery"}
@@ -723,7 +723,7 @@
{"id":"bd-bscs","title":"GH#518: Document bd setup command","description":"bd setup (e.g. bd setup cursor) is undocumented. Users only find it by grepping source. Need proper docs. See: https://github.com/steveyegge/beads/issues/518","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-14T16:31:35.881408-08:00","updated_at":"2025-12-16T14:39:19.052118-08:00","closed_at":"2025-12-16T01:09:09.420428-08:00"}
{"id":"bd-bt6y","title":"Improve compact/daemon/merge documentation and UX","description":"Multiple documentation and UX issues encountered:\n1. \"bd compact --analyze\" fails with misleading \"requires SQLite storage\" error when daemon is running. Needs --no-daemon or better error.\n2. \"bd merge\" help text is outdated (refers to 3-way merge instead of issue merging).\n3. Daemon mode purpose isn't clear to local-only users.\n4. Compact/cleanup commands are hard to discover.\n\nProposed fixes:\n- Fix compact+daemon interaction or error message.\n- Update \"bd merge\" help text.\n- Add \"when to use daemon\" section to docs.\n- Add maintenance section to quickstart.\n","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-20T18:55:43.637047-05:00","updated_at":"2025-12-09T18:38:37.684256672-05:00","closed_at":"2025-11-28T23:10:43.884784-08:00"}
{"id":"bd-buol","title":"Invert control for compact: provide tools for agent-driven compaction","description":"Currently compact requires Anthropic API key because bd calls the AI directly. This is backwards - we should provide tools (like all other bd commands) that let an AI agent perform the compaction. The agent decides what to keep/merge, not bd. Related to GH #243 complaint about API key requirement.","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-07T00:27:28.498069-08:00","updated_at":"2025-11-07T23:18:08.38606-08:00","closed_at":"2025-11-07T23:08:51.67473-08:00"}
{"id":"bd-bur4u","title":"Review PR #16605: ralph-wiggum nix/nixos fix","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16605 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16605\nAuthor: onsails\nStatus: APPROVED by otavio and philiptaron\n\nNix/NixOS environment fix.\n- gh pr view 16605 --repo anthropics/claude-code\n- gh pr diff 16605 --repo anthropics/claude-code\n- If good: gh pr merge 16605 --repo anthropics/claude-code --squash","status":"hooked","priority":2,"issue_type":"task","assignee":"beads/crew/fang","created_at":"2026-01-08T14:20:26.834702-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:22:37.856537-08:00"}
{"id":"bd-bur4u","title":"Review PR #16605: ralph-wiggum nix/nixos fix","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16605 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16605\nAuthor: onsails\nStatus: APPROVED by otavio and philiptaron\n\nNix/NixOS environment fix.\n- gh pr view 16605 --repo anthropics/claude-code\n- gh pr diff 16605 --repo anthropics/claude-code\n- If good: gh pr merge 16605 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/fang","created_at":"2026-01-08T14:20:26.834702-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.603515-08:00","closed_at":"2026-01-08T14:29:35.603515-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-bvec","title":"Test coverage improvement initiative (47.8% → 65%)","description":"Umbrella epic for improving overall test coverage from 47.8% to 65%+.\n\n## Summary\n\n| Package | Current | Target | Issue |\n|---------|---------|--------|-------|\n| internal/compact | 18.2% | 70% | bd-thgk |\n| cmd/bd/doctor/fix | 23.9% | 50% | bd-fx7v |\n| cmd/bd | 26.2% | 50% | bd-llfl |\n| internal/daemon | 27.3% | 60% | bd-n386 |\n| cmd/bd/setup | 28.4% | 50% | bd-sh4c |\n| internal/syncbranch | 33.0% | 70% | bd-io8c |\n| internal/export | 37.1% | 60% | bd-6sm6 |\n| internal/lockfile | 42.0% | 60% | bd-9w3s |\n| internal/rpc | 47.5% | 60% | bd-m8ro |\n| internal/beads | 48.1% | 70% | bd-tvu3 |\n| internal/storage | N/A | basic | bd-a15d |\n\n## Packages with good coverage (no action needed)\n- internal/types: 91.0%\n- internal/utils: 88.9%\n- internal/deletions: 84.3%\n- internal/config: 84.2%\n- internal/autoimport: 83.5%\n- internal/validation: 80.8%\n- internal/merge: 78.9%\n- internal/routing: 74.3%\n- internal/storage/sqlite: 73.1%\n- internal/importer: 70.2%\n\nOverall target: 65%+ (from current 47.8%)","status":"open","priority":2,"issue_type":"epic","created_at":"2025-12-13T20:43:22.901825-08:00","updated_at":"2025-12-13T20:43:22.901825-08:00","dependencies":[{"issue_id":"bd-bvec","depends_on_id":"bd-thgk","type":"blocks","created_at":"2025-12-13T20:43:29.536041-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-tvu3","type":"blocks","created_at":"2025-12-13T20:43:29.588057-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-n386","type":"blocks","created_at":"2025-12-13T20:43:29.637931-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-io8c","type":"blocks","created_at":"2025-12-13T20:43:29.689467-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-llfl","type":"blocks","created_at":"2025-12-13T20:43:29.738487-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-sh4c","type":"blocks","created_at":"2025-12-13T20:43:29.789217-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-fx7v","type":"blocks","created_at":"2025-12-13T20:43:29.839732-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-6sm6","type":"blocks","created_at":"2025-12-13T20:43:29.887425-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-9w3s","type":"blocks","created_at":"2025-12-13T20:43:29.936762-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-m8ro","type":"blocks","created_at":"2025-12-13T20:43:29.98703-08:00","created_by":"daemon"},{"issue_id":"bd-bvec","depends_on_id":"bd-a15d","type":"blocks","created_at":"2025-12-13T20:43:30.049603-08:00","created_by":"daemon"}]}
{"id":"bd-bvo2","title":"Issue 2","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-22T14:57:44.526064586-05:00","updated_at":"2025-11-22T14:57:44.526064586-05:00","closed_at":"2025-11-07T21:55:09.429328-08:00"}
{"id":"bd-bw6","title":"Fix G104 errors unhandled in internal/storage/sqlite/queries.go:1181","description":"Linting issue: G104: Errors unhandled (gosec) at internal/storage/sqlite/queries.go:1181:4. Error: rows.Close()","status":"tombstone","priority":0,"issue_type":"bug","created_at":"2025-12-07T15:35:09.008444133-07:00","updated_at":"2025-12-25T01:21:01.952723-08:00","deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"}
@@ -743,7 +743,7 @@
{"id":"bd-c3ei","title":"Migration guide documentation","description":"Write comprehensive migration guide covering: OSS contributor workflow, team workflow, multi-phase development, multiple personas. Include step-by-step instructions, troubleshooting, and backward compatibility notes.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T18:04:29.84662-08:00","updated_at":"2025-11-05T18:12:30.907835-08:00","closed_at":"2025-11-05T18:12:30.907835-08:00","dependencies":[{"issue_id":"bd-c3ei","depends_on_id":"bd-8rd","type":"parent-child","created_at":"2025-11-05T18:04:39.028291-08:00","created_by":"daemon"}]}
{"id":"bd-c3u","title":"Review PR #512: clarify bd ready docs","description":"Review and merge PR #512 from aspiers. This PR clarifies what bd ready does after git pull in README.md. Simple 1-line change. URL: https://github.com/anthropics/beads/pull/512","status":"tombstone","priority":2,"issue_type":"task","created_at":"2025-12-13T08:15:13.405161+11:00","updated_at":"2025-12-25T01:21:01.952723-08:00","deleted_at":"2025-12-25T01:21:01.952723-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"}
{"id":"bd-c49","title":"Audit all cmd/bd tests and group into suites","description":"Analyze all 279 tests in cmd/bd and identify:\n1. Which tests can share DB setup (most of them\\!)\n2. Which tests actually need isolation (export/import, git ops)\n3. Optimal grouping into test suites\n\nCreate a mapping document showing:\n- Current: 279 individual test functions\n- Proposed: ~10-15 test suites with subtests\n- Expected speedup per suite\n\nBlocks all refactoring work.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-21T11:49:19.438242-05:00","updated_at":"2025-11-21T16:07:50.846006-05:00","closed_at":"2025-11-21T15:15:29.50544-05:00"}
{"id":"bd-c4nfq","title":"Review PR #16929: Respect --comment flag","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16929 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16929\nAuthor: heathdutton\nFixes: #16606\n\nThe /code-review command was posting inline comments by default, but README says terminal output is default.\n- gh pr view 16929 --repo anthropics/claude-code\n- gh pr diff 16929 --repo anthropics/claude-code\n- If good: gh pr merge 16929 --repo anthropics/claude-code --squash","status":"hooked","priority":2,"issue_type":"task","assignee":"beads/crew/wolf","created_at":"2026-01-08T14:20:29.469584-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:22:41.298583-08:00"}
{"id":"bd-c4nfq","title":"Review PR #16929: Respect --comment flag","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16929 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16929\nAuthor: heathdutton\nFixes: #16606\n\nThe /code-review command was posting inline comments by default, but README says terminal output is default.\n- gh pr view 16929 --repo anthropics/claude-code\n- gh pr diff 16929 --repo anthropics/claude-code\n- If good: gh pr merge 16929 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/wolf","created_at":"2026-01-08T14:20:29.469584-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.606395-08:00","closed_at":"2026-01-08T14:29:35.606395-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-c4rq","title":"Refactor: Move staleness check inside daemon branch","description":"## Problem\n\nCurrently ensureDatabaseFresh() is called before the daemon mode check, but it checks daemonClient != nil internally and returns early. This is redundant.\n\n**Location:** All read commands (list.go:196, show.go:27, ready.go:102, status.go:80, etc.)\n\n## Current Pattern\n\nCall happens before daemon check, function checks daemonClient internally.\n\n## Better Pattern\n\nMove staleness check to direct mode branch only, after daemon check.\n\n## Impact\nLow - minor performance improvement (avoids one function call per command in daemon mode)\n\n## Effort\nMedium - requires refactoring 8 command files\n\n## Priority\nLow - can defer to future cleanup PR","status":"closed","priority":3,"issue_type":"chore","created_at":"2025-11-20T20:17:45.119583-05:00","updated_at":"2025-12-09T18:38:37.686612072-05:00","closed_at":"2025-11-28T23:37:52.276192-08:00"}
{"id":"bd-c4wq","title":"Work on gt-8tmz.36: Validate expanded step IDs are unique...","description":"Work on gt-8tmz.36: Validate expanded step IDs are unique. In internal/formula/, add validation during cooking that checks for duplicate step IDs after expansion. When done: 1) bd close gt-8tmz.36, 2) bd sync, 3) git push, 4) gt mq submit","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-25T19:26:31.323192-08:00","updated_at":"2025-12-25T19:37:49.605774-08:00","closed_at":"2025-12-25T19:37:49.605774-08:00"}
{"id":"bd-c6w","title":"bd info whats-new missing releases","description":"Current release is v0.25.1 but `bd info --whats-new` stops at v0.23.0, indicating something is missing in the create new release workflow.","notes":"github issue #386","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-26T05:50:37.252394374-07:00","updated_at":"2025-11-26T06:28:21.974264087-07:00","closed_at":"2025-11-26T06:28:21.974264087-07:00"}
@@ -1362,7 +1362,7 @@
{"id":"bd-nppb","title":"Refinery Patrol","description":"Merge queue processor patrol loop with verification gates.","status":"tombstone","priority":2,"issue_type":"molecule","created_at":"2025-12-26T13:08:21.308272-08:00","updated_at":"2025-12-27T00:10:54.177947-08:00","deleted_at":"2025-12-27T00:10:54.177947-08:00","deleted_by":"daemon","delete_reason":"delete","original_type":"molecule"}
{"id":"bd-nq41","title":"Fix Homebrew warning about Ruby file location","description":"Homebrew warning: Found Ruby file outside steveyegge/beads tap formula directory.\nWarning points to: /opt/homebrew/Library/Taps/steveyegge/homebrew-beads/bd.rb\nIt should likely be inside a Formula/ directory or similar structure expected by Homebrew taps.\n","status":"closed","priority":2,"issue_type":"chore","created_at":"2025-11-20T18:56:21.226579-05:00","updated_at":"2025-12-09T18:38:37.701783372-05:00","closed_at":"2025-11-26T22:25:37.362928-08:00"}
{"id":"bd-nqes","title":"bd-hv01: Non-atomic snapshot operations can cause data loss","description":"## Problem\nIn sync.go:146-155 and daemon_sync.go:502-505, snapshot capture failures are logged as warnings but sync continues:\n\n```go\nif err := exportToJSONL(ctx, jsonlPath); err != nil { ... }\nif err := captureLeftSnapshot(jsonlPath); err != nil {\n fmt.Fprintf(os.Stderr, \"Warning: failed to capture snapshot...\")\n}\n```\n\nIf export succeeds but snapshot capture fails, the merge uses stale snapshot data, potentially deleting wrong issues.\n\n## Impact\n- Critical data integrity issue\n- Could delete issues incorrectly during multi-workspace sync\n\n## Fix\nMake snapshot capture mandatory:\n```go\nif err := captureLeftSnapshot(jsonlPath); err != nil {\n return fmt.Errorf(\"failed to capture snapshot (required for deletion tracking): %w\", err)\n}\n```\n\n## Files Affected\n- cmd/bd/sync.go:146-155\n- cmd/bd/daemon_sync.go:502-505","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-06T18:15:33.574158-08:00","updated_at":"2025-11-06T18:46:55.874814-08:00","closed_at":"2025-11-06T18:46:55.874814-08:00","dependencies":[{"issue_id":"bd-nqes","depends_on_id":"bd-rbxi","type":"parent-child","created_at":"2025-11-06T18:19:14.749153-08:00","created_by":"daemon"}]}
{"id":"bd-nqr5l","title":"Review PR #16562: Portable shebang in ralph-wiggum","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16562 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16562\nAuthor: mantrakp04\nFixes: #12880\n\nChanges #!/bin/bash to #!/usr/bin/env bash for NixOS/WSL2 compatibility.\n- gh pr view 16562 --repo anthropics/claude-code\n- gh pr diff 16562 --repo anthropics/claude-code\n- If good: gh pr merge 16562 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/dave","created_at":"2026-01-08T14:20:25.65767-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:23:28.200626-08:00","closed_at":"2026-01-08T14:23:28.200626-08:00","close_reason":"Reviewed and approved PR #16562 (portable shebang fix). Standard portability improvement for NixOS/WSL2 compatibility."}
{"id":"bd-nqr5l","title":"Review PR #16562: Portable shebang in ralph-wiggum","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16562 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16562\nAuthor: mantrakp04\nFixes: #12880\n\nChanges #!/bin/bash to #!/usr/bin/env bash for NixOS/WSL2 compatibility.\n- gh pr view 16562 --repo anthropics/claude-code\n- gh pr diff 16562 --repo anthropics/claude-code\n- If good: gh pr merge 16562 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/dave","created_at":"2026-01-08T14:20:25.65767-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.602117-08:00","closed_at":"2026-01-08T14:29:35.602117-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-nqyp","title":"mol-beads-release","description":"Release checklist for beads version {{version}}.\n\nThis molecule ensures all release steps are completed properly.\nVariable: {{version}} - target version (e.g., 0.35.0)\n\n## Step: update-release-notes\nUpdate cmd/bd/info.go with release notes for {{version}}.\n\nAdd a new VersionChange entry at the top of versionChanges slice:\n```go\n{\n Version: \"{{version}}\",\n Date: \"YYYY-MM-DD\",\n Changes: []string{\n \"NEW: Feature description\",\n \"FIX: Bug fix description\",\n \"IMPROVED: Enhancement description\",\n },\n},\n```\n\nRun `git log --oneline v\u003cprevious\u003e..HEAD` to see what changed.\n\n## Step: update-changelog\nUpdate CHANGELOG.md with detailed release notes.\n\nAdd a new section after [Unreleased]:\n```markdown\n## [{{version}}] - YYYY-MM-DD\n\n### Added\n- **Feature name** (issue-id) - Description\n\n### Changed\n- **Change description** (issue-id)\n\n### Fixed\n- **Bug fix** (issue-id) - Description\n```\n\nSort by importance, not chronologically.\nNeeds: update-release-notes\n\n## Step: bump-version\nRun the version bump script.\n\n```bash\n./scripts/bump-version.sh {{version}}\n```\n\nThis updates version in all files:\n- cmd/bd/version.go\n- .claude-plugin/*.json\n- integrations/beads-mcp/pyproject.toml\n- npm-package/package.json\n- Hook templates\n\nNeeds: update-changelog\n\n## Step: run-tests\nRun tests and verify lint passes.\n\n```bash\ngo test -short ./...\n```\n\nCI will run full lint, but fix any obvious issues first.\nNeeds: bump-version\n\n## Step: commit-release\nCommit the release changes.\n\n```bash\ngit add -A\ngit commit -m \"chore: bump version to v{{version}}\"\n```\n\nNeeds: run-tests\n\n## Step: push-and-tag\nPush commit and create release tag.\n\n```bash\ngit push origin main\ngit tag v{{version}}\ngit push origin v{{version}}\n```\n\nThis triggers GitHub Actions release workflow.\nNeeds: commit-release\n\n## Step: wait-for-ci\nWait for GitHub Actions to complete.\n\nMonitor: https://github.com/steveyegge/beads/actions\n\nCI will:\n- Build binaries via GoReleaser\n- Create GitHub Release with assets\n- Publish to npm (@beads/bd)\n- Publish to PyPI (beads-mcp)\n- Update Homebrew tap\n\nWait until all jobs succeed (~5-10 min).\nNeeds: push-and-tag\n\n## Step: verify-release\nVerify the release is complete.\n\n```bash\n# Check GitHub release\ngh release view v{{version}}\n\n# Check Homebrew\nbrew update \u0026\u0026 brew info steveyegge/beads/bd\n\n# Check npm\nnpm view @beads/bd version\n\n# Check PyPI\npip index versions beads-mcp\n```\n\nNeeds: wait-for-ci\n\n## Step: update-local\nUpdate local installations with proper codesigning (macOS).\n\n```bash\n# Build from source in mayor/rig (canonical build location)\ncd ~/gt/beads/mayor/rig\ngit pull\ngo build -o bd ./cmd/bd\n\n# Sign and install (macOS requires codesigning to avoid \"Killed: 9\")\n# Uses fix-gt script which handles both gt and bd binaries\nfix-gt\n\n# Or manually sign if fix-gt not available:\n# xattr -cr bd \u0026\u0026 codesign -f -s - bd\n# cp bd ~/go/bin/bd \u0026\u0026 codesign -f -s - ~/go/bin/bd\n# cp bd ~/.local/bin/bd \u0026\u0026 codesign -f -s - ~/.local/bin/bd\n\n# Install MCP locally\npip install -e integrations/beads-mcp\n\n# Restart daemons\npkill -f \"bd daemon\" || true\n```\n\nVerify: `bd --version` shows {{version}}\nNeeds: verify-release\n\n## Step: manual-publish\n(Optional) Manual publish if CI failed.\n\n```bash\n# npm (requires npm login)\n./scripts/bump-version.sh {{version}} --publish-npm\n\n# PyPI (requires TWINE credentials)\n./scripts/bump-version.sh {{version}} --publish-pypi\n\n# Or both\n./scripts/bump-version.sh {{version}} --publish-all\n```\n\nOnly needed if CI publishing failed.\nNeeds: wait-for-ci","status":"tombstone","priority":2,"issue_type":"molecule","created_at":"2025-12-23T11:29:39.087936-08:00","updated_at":"2025-12-28T01:26:51.06645-08:00","labels":["template"],"deleted_at":"2025-12-28T01:26:51.06645-08:00","deleted_by":"daemon","delete_reason":"delete","original_type":"molecule"}
{"id":"bd-nsb","title":"Doctor should exclude merge artifacts from 'multiple JSONL' warning","description":"Doctor command warns about 'multiple JSONL files' when .base.jsonl and .left.jsonl merge artifacts exist. These are expected during/after merge operations and should be excluded from the warning.","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-11-28T17:27:36.988178-08:00","updated_at":"2025-11-28T18:36:52.087768-08:00","closed_at":"2025-11-28T17:41:50.700658-08:00"}
{"id":"bd-nszi","title":"Post-merge hook silently fails on JSONL conflicts, poor UX","description":"When git pull results in merge conflicts in .beads/issues.jsonl, the post-merge hook runs 'bd sync --import-only' which fails, but stderr was redirected to /dev/null. User only saw generic warning.\n\nFixed by capturing and displaying the actual error output, so users see 'Git conflict markers detected' message immediately.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-08T02:31:04.909925-08:00","updated_at":"2025-11-08T02:31:45.237286-08:00","closed_at":"2025-11-08T02:31:45.237286-08:00"}
@@ -1600,7 +1600,7 @@
{"id":"bd-tnsq","title":"bd cleanup fails with CHECK constraint on status/closed_at mismatch","description":"## Problem\n\nRunning bd cleanup --force fails with:\n\nError: failed to create tombstone for bd-okh: sqlite3: constraint failed: CHECK constraint failed: (status = 'closed') = (closed_at IS NOT NULL)\n\n## Root Cause\n\nThe database has a CHECK constraint ensuring closed issues have closed_at set and non-closed issues do not. When bd cleanup tries to convert a closed issue to a tombstone, this constraint fails.\n\n## Impact\n\n- bd cleanup --force cannot complete\n- 722 closed issues cannot be cleaned up\n- Blocks routine maintenance\n\n## Investigation Needed\n\n1. Check the bd-okh record in the database\n2. Determine if this is data corruption or a bug in tombstone creation\n\n## Proposed Solutions\n\n1. If data corruption: Add a bd doctor --fix check that repairs status/closed_at mismatches\n2. If code bug: Fix the tombstone creation to properly handle the constraint\n\n## Files to Investigate\n\n- internal/storage/sqlite/sqlite.go - DeleteIssue / tombstone creation\n- Schema CHECK constraint definition\n\n## Acceptance Criteria\n\n- Identify root cause (data vs code bug)\n- bd cleanup --force completes successfully\n- bd doctor detects status/closed_at mismatches","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-12-14T00:27:46.359724-08:00","updated_at":"2025-12-14T00:41:54.584366-08:00","closed_at":"2025-12-14T00:34:59.658781-08:00"}
{"id":"bd-to1u","title":"Run bump-version.sh test-squash","description":"Run ./scripts/bump-version.sh test-squash to update version in all files","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-21T13:52:33.06696-08:00","updated_at":"2025-12-21T13:53:41.841677-08:00","deleted_at":"2025-12-21T13:53:41.841677-08:00","deleted_by":"stevey","delete_reason":"manual delete","original_type":"task"}
{"id":"bd-toy3","title":"Test hook","status":"tombstone","priority":2,"issue_type":"task","created_at":"2025-12-16T18:33:39.717036-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"}
{"id":"bd-tq3gx","title":"Review PR #16459: Fix broken doc link","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16459 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16459\nAuthor: nelsonauner\nStatus: APPROVED by sarahdeaton\n\nTask: Verify the doc link fix is correct and merge if appropriate.\n- gh pr view 16459 --repo anthropics/claude-code\n- gh pr diff 16459 --repo anthropics/claude-code\n- If good: gh pr merge 16459 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/dave","created_at":"2026-01-08T14:20:03.669242-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:23:26.584669-08:00","closed_at":"2026-01-08T14:23:26.584669-08:00","close_reason":"Reviewed and approved PR #16459 (doc link fix). Don't have merge permissions but verified new URL is valid."}
{"id":"bd-tq3gx","title":"Review PR #16459: Fix broken doc link","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16459 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16459\nAuthor: nelsonauner\nStatus: APPROVED by sarahdeaton\n\nTask: Verify the doc link fix is correct and merge if appropriate.\n- gh pr view 16459 --repo anthropics/claude-code\n- gh pr diff 16459 --repo anthropics/claude-code\n- If good: gh pr merge 16459 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/dave","created_at":"2026-01-08T14:20:03.669242-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.595569-08:00","closed_at":"2026-01-08T14:29:35.595569-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-tqo","title":"deletions.jsonl gets corrupted with full issue objects instead of deletion records","description":"## Bug Description\n\nThe deletions.jsonl file was found to contain full issue objects (like issues.jsonl) instead of deletion records.\n\n### Expected Format (DeletionRecord)\n```json\n{\"id\":\"bd-xxx\",\"timestamp\":\"2025-...\",\"actor\":\"user\",\"reason\":\"deleted\"}\n```\n\n### Actual Content Found\n```json\n{\"id\":\"bd-03r\",\"title\":\"Document deletions manifest...\",\"description\":\"...\",\"status\":\"closed\",...}\n```\n\n## Impact\n- bd sync sanitization step reads deletions.jsonl and removes any matching IDs from issues.jsonl\n- With 60 full issue objects in deletions.jsonl, ALL 60 issues were incorrectly removed during sync\n- This caused complete data loss of the issue database\n\n## Root Cause (suspected)\nSomething wrote issues.jsonl content to deletions.jsonl. Possible causes:\n- Export writing to wrong file\n- File path confusion during sync\n- Race condition between export and deletion tracking\n\n## Related Issues\n- bd-0b2: --no-git-history flag (just fixed)\n- bd-4pv: export outputs only 1 issue after corruption \n- bd-4t7: auto-import runs during --no-auto-import\n\n## Reproduction\nUnknown - discovered during bd sync session on 2025-11-26\n\n## Fix\nNeed to investigate what code path could write issue objects to deletions.jsonl","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-26T23:17:01.938931-08:00","updated_at":"2025-11-26T23:25:21.445143-08:00","closed_at":"2025-11-26T23:25:02.209911-08:00"}
{"id":"bd-trgb","title":"bd sync deleted non-.beads files (skills/beads/*)","description":"On 2025-12-23, commit 7b671662 (bd sync) inadvertently deleted 5 files from skills/beads/ that were added by PR #722 (commit e432fcc8). These files are outside .beads/ and should never be touched by bd sync.\n\nFiles deleted:\n- skills/beads/README.md\n- skills/beads/references/INTEGRATION_PATTERNS.md\n- skills/beads/references/MOLECULES.md\n- skills/beads/references/PATTERNS.md\n- skills/beads/references/TROUBLESHOOTING.md\n\nInvestigation needed:\n1. How did bd sync stage/commit files outside .beads/?\n2. Was this a one-time accident or is there a systematic bug?\n3. Add safeguards to prevent bd sync from touching non-.beads paths\n\nReported via GH#738.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-12-25T11:56:04.544656-08:00","updated_at":"2025-12-25T12:05:31.785355-08:00","closed_at":"2025-12-25T12:05:31.785355-08:00"}
{"id":"bd-tru","title":"Update documentation for bd prime and Claude integration","description":"Update AGENTS.md, README.md, and QUICKSTART.md to document the new `bd prime` command, `bd setup claude` command, and tip system.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-11T23:30:22.77349-08:00","updated_at":"2025-12-09T18:38:37.706700072-05:00","closed_at":"2025-11-25T17:47:30.807069-08:00","dependencies":[{"issue_id":"bd-tru","depends_on_id":"bd-rpn","type":"blocks","created_at":"2025-11-11T23:30:22.774216-08:00","created_by":"daemon"},{"issue_id":"bd-tru","depends_on_id":"bd-br8","type":"blocks","created_at":"2025-11-11T23:30:22.774622-08:00","created_by":"daemon"},{"issue_id":"bd-tru","depends_on_id":"bd-90v","type":"parent-child","created_at":"2025-11-11T23:31:35.277819-08:00","created_by":"daemon"}]}
@@ -1684,11 +1684,11 @@
{"id":"bd-vxp1","title":"Test Parent Epic","status":"tombstone","priority":2,"issue_type":"epic","created_at":"2025-12-27T22:15:17.894209-08:00","created_by":"beads/crew/dave","updated_at":"2025-12-27T22:16:35.925357-08:00","deleted_at":"2025-12-27T22:16:35.925357-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"epic"}
{"id":"bd-vzds","title":"Create git tag v0.33.2","description":"Create the release tag:\n\n```bash\ngit tag v0.33.2\n```\n\nVerify: `git tag | grep 0.33.2`","status":"tombstone","priority":1,"issue_type":"task","created_at":"2025-12-21T16:10:13.761888-08:00","updated_at":"2025-12-21T17:29:31.791368-08:00","deleted_at":"2025-12-21T17:29:31.791368-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"task"}
{"id":"bd-w03ka","title":"Session ended: gt-beads-crew-giles","status":"closed","priority":2,"issue_type":"event","created_at":"2026-01-07T17:42:03.142759-08:00","created_by":"beads/crew/giles","updated_at":"2026-01-07T17:42:03.183031-08:00","closed_at":"2026-01-07T17:42:03.183031-08:00","close_reason":"auto-closed session event"}
{"id":"bd-w05sg","title":"Review PR #16755: Fix PROMPT_PARTS with set -u","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16755 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16755\nAuthor: KCW89\n\nFixes bash strict mode compatibility in ralph-wiggum.\n- gh pr view 16755 --repo anthropics/claude-code\n- gh pr diff 16755 --repo anthropics/claude-code\n- If good: gh pr merge 16755 --repo anthropics/claude-code --squash","status":"hooked","priority":2,"issue_type":"task","assignee":"beads/crew/wolf","created_at":"2026-01-08T14:20:07.7025-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:22:22.736594-08:00"}
{"id":"bd-w05sg","title":"Review PR #16755: Fix PROMPT_PARTS with set -u","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16755 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16755\nAuthor: KCW89\n\nFixes bash strict mode compatibility in ralph-wiggum.\n- gh pr view 16755 --repo anthropics/claude-code\n- gh pr diff 16755 --repo anthropics/claude-code\n- If good: gh pr merge 16755 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/wolf","created_at":"2026-01-08T14:20:07.7025-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.600655-08:00","closed_at":"2026-01-08T14:29:35.600655-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-w193","title":"Work on beads-399: Add omitempty to JSONL fields for smal...","description":"Work on beads-399: Add omitempty to JSONL fields for smaller notifications. When done, submit MR (not PR) to integration branch for Refinery.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-19T22:55:37.440894-08:00","updated_at":"2025-12-19T23:28:32.42751-08:00","closed_at":"2025-12-19T23:23:09.542288-08:00"}
{"id":"bd-w3rh","title":"Phase 4: Cross-Rig Bead Gates","description":"Implement cross-rig bead dependency gates.\n\n## Behavior\n- Gate waits on a bead in another rig\n- Leverage existing external dep resolution via bd sync\n- `bd ready` / `bd sync` resolves naturally\n\n## Implementation\n1. `bd cook` creates gate with external dep on target bead\n2. Gate has `await_type=bead` and `await_id=\u003crig\u003e:\u003cbead-id\u003e`\n3. During bd sync, cross-rig deps are resolved\n4. When target bead closes, gate can close\n\n## Design Question\nShould this piggyback on existing dependency resolution, or have explicit gate check?\n\nOption A: Use existing blocking deps (simpler)\nOption B: Explicit `bd gate check --type=bead` (more control)\n\n## Acceptance Criteria\n- [ ] Gates can reference beads in other rigs\n- [ ] Gate resolves when target bead closes\n- [ ] Works with bd sync for cross-rig resolution","status":"closed","priority":3,"issue_type":"task","assignee":"beads/polecats/onyx","created_at":"2026-01-02T01:55:43.840566-08:00","created_by":"mayor","updated_at":"2026-01-02T13:05:51.785747-08:00","closed_at":"2026-01-02T13:05:51.785747-08:00","close_reason":"Implemented cross-rig bead gates: added await_type=bead with await_id=\u003crig\u003e:\u003cbead-id\u003e format, added bd gate check command with --type=bead support","dependencies":[{"issue_id":"bd-w3rh","depends_on_id":"bd-mcva","type":"parent-child","created_at":"2026-01-02T01:55:53.966328-08:00","created_by":"mayor"}]}
{"id":"bd-w3z7","title":"Move cook to formula subcommand","description":"## Task\nMove `bd cook` → `bd formula cook`\n\n## Implementation\n\n### 1. Update formula.go\n- Add `cookCmd` as subcommand of `formulaCmd`\n- Import necessary packages from cook.go if not already present\n\n### 2. Update cook.go\n- Remove `rootCmd.AddCommand(cookCmd)` from init()\n- Keep the command implementation as-is\n\n### 3. Create hidden alias for backwards compatibility\n- In main.go or aliases file, add:\n ```go\n aliasCmd := \u0026cobra.Command{\n Use: \"cook\",\n Hidden: true,\n Run: func(cmd *cobra.Command, args []string) {\n // Forward to formula cook\n },\n }\n ```\n\n### 4. Update docs\n- docs/MOLECULES.md - if `bd cook` mentioned\n- CHANGELOG.md - add deprecation notice\n\n## Files to modify\n- cmd/bd/formula.go (add subcommand)\n- cmd/bd/cook.go (change registration)\n- cmd/bd/main.go (add hidden alias)\n","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-27T15:10:21.169344-08:00","created_by":"mayor","updated_at":"2025-12-27T16:00:56.582141-08:00","closed_at":"2025-12-27T16:00:56.582141-08:00"}
{"id":"bd-w43xt","title":"Review PR #16228: Node 20 to 24 in devcontainer","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16228 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16228\nAuthor: tomoki10\n\nUpdates Node.js from v20 (maintenance phase) to v24.\n- gh pr view 16228 --repo anthropics/claude-code\n- gh pr diff 16228 --repo anthropics/claude-code\n- If good: gh pr merge 16228 --repo anthropics/claude-code --squash","status":"hooked","priority":2,"issue_type":"task","assignee":"beads/crew/giles","created_at":"2026-01-08T14:20:28.195989-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:22:39.697936-08:00"}
{"id":"bd-w43xt","title":"Review PR #16228: Node 20 to 24 in devcontainer","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16228 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16228\nAuthor: tomoki10\n\nUpdates Node.js from v20 (maintenance phase) to v24.\n- gh pr view 16228 --repo anthropics/claude-code\n- gh pr diff 16228 --repo anthropics/claude-code\n- If good: gh pr merge 16228 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/giles","created_at":"2026-01-08T14:20:28.195989-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.604879-08:00","closed_at":"2026-01-08T14:29:35.604879-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-w5ke7","title":"Session ended: gt-beads-crew-emma","status":"open","priority":2,"issue_type":"event","created_at":"2026-01-07T21:37:16.866979-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-07T21:37:16.866979-08:00"}
{"id":"bd-w654","title":"Merge: quartz-1767082908528","description":"branch: polecat/quartz-1767082908528\ntarget: main\nsource_issue: quartz-1767082908528\nrig: beads","status":"closed","priority":2,"issue_type":"merge-request","created_at":"2025-12-30T00:24:52.846909-08:00","created_by":"beads/polecats/quartz","updated_at":"2025-12-30T00:54:59.720022-08:00","closed_at":"2025-12-30T00:54:59.720022-08:00","close_reason":"Branch polecat/quartz-1767082908528 no longer exists on remote"}
{"id":"bd-w8g0","title":"test pin issue","status":"tombstone","priority":2,"issue_type":"task","created_at":"2025-12-20T22:44:27.963361-08:00","updated_at":"2025-12-20T22:44:57.977229-08:00","deleted_at":"2025-12-20T22:44:57.977229-08:00","deleted_by":"daemon","delete_reason":"delete","original_type":"task"}
@@ -1805,7 +1805,7 @@
{"id":"bd-z4f5","title":"--parent flag reports success but doesn't persist to JSONL","description":"The --parent flag for bd update reports success but the change doesn't persist.\n\nReported by: Mayor\nLocation: show.go:810-814 handles the logic\n\nSymptoms:\n- bd update \u003cid\u003e --parent=\u003cnew-parent\u003e returns success\n- But the parent change is not written to JSONL\n- Subsequent bd show reveals parent unchanged\n\nThis shipped in v0.39.1 as part of bd-cj2e (--parent flag for reparenting).\n\nInvestigation: Check the update path from show.go through to JSONL export. The RPC/daemon layer may be dropping the parent field, or the storage layer isn't persisting it.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-12-27T23:10:22.428136-08:00","created_by":"beads/crew/emma","updated_at":"2025-12-27T23:27:45.716572-08:00","closed_at":"2025-12-27T23:27:45.716572-08:00"}
{"id":"bd-z528","title":"Prevent test pollution in production database","description":"The bd-vxdr cleanup revealed test issues were created during manual testing in the production workspace (Nov 2-4, template feature development).\n\n**Root cause:** Manual testing with `./bd create \"Test issue\"` pollutes the production .beads database.\n\n**Prevention strategies:**\n1. Use TEST_DB environment variable for manual testing\n2. Add warning when creating issues with \"Test\" prefix\n3. Improve developer docs about testing workflow\n4. Consider adding `bd test-mode` command for isolated testing","notes":"**Implementation completed:**\n\n1. ✅ Added warning when creating issues with \"Test\" prefix in production database\n - Shows yellow warning with ⚠ symbol\n - Suggests using BEADS_DB for isolated testing\n - Warning appears in create.go after title validation\n\n2. ✅ Documented BEADS_DB testing workflow in AGENTS.md\n - Added \"Testing Workflow\" section in Development Guidelines\n - Includes manual testing examples with BEADS_DB\n - Includes automated testing examples with t.TempDir()\n - Clear warning about not polluting production database\n\n3. ⚠️ Decided against bd test-mode command\n - BEADS_DB already provides simple, flexible isolation\n - Additional command would add complexity without much benefit\n - Current approach follows Unix philosophy (env vars for config)\n\n**Files modified:**\n- cmd/bd/create.go - Added Test prefix warning\n- AGENTS.md - Added Testing Workflow section\n\n**Testing:**\n- Verified warning appears when creating \"Test\" prefix issues\n- Verified BEADS_DB isolation works correctly\n- Built successfully with `go build`","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-07T16:07:28.255289-08:00","updated_at":"2025-11-07T23:18:08.386514-08:00","closed_at":"2025-11-07T22:43:28.669908-08:00"}
{"id":"bd-z6kw","title":"Refinery gh:run gate auto-discovery","description":"Refinery auto-populates await_id for gh:run gates from recent workflow runs.\n\n## Problem\nGate created by cook has await_type=gh:run but no await_id.\nNeed to discover the run ID from the push that triggered CI.\n\n## Solution\nDuring Refinery patrol:\n1. Find open gh:run gates without await_id\n2. Query: gh run list --workflow=\u003cgate.workflow\u003e --limit=5\n3. Match run to gate (by branch, commit, or time proximity)\n4. Update gate: bd update \u003cgate-id\u003e --await-id=\u003crun-id\u003e\n5. Now bd gate check --type=gh can poll that specific run\n\n## Implementation\n- Add discover-await-ids step to mol-refinery-patrol\n- Use gh CLI to query recent runs\n- Match heuristics: same branch, recent commit, within 5 mins\n- Update gate with discovered run ID\n\n## Acceptance Criteria\n- [ ] Refinery discovers run IDs for gh:run gates\n- [ ] Gates updated with correct await_id\n- [ ] Subsequent polls use run ID\n- [ ] Handles multiple pending gates","status":"closed","priority":2,"issue_type":"task","created_at":"2026-01-02T13:27:42.35667-08:00","created_by":"mayor","updated_at":"2026-01-04T15:22:07.771701-08:00","closed_at":"2026-01-02T16:12:24.656236-08:00","close_reason":"Implemented bd gate discover command for auto-discovery of gh:run gate await_ids","dependencies":[{"issue_id":"bd-z6kw","depends_on_id":"bd-d1n1","type":"parent-child","created_at":"2026-01-02T13:28:18.621422-08:00","created_by":"mayor"},{"issue_id":"bd-z6kw","depends_on_id":"bd-4k3c","type":"blocks","created_at":"2026-01-02T13:28:18.688305-08:00","created_by":"mayor"}]}
{"id":"bd-z7w5p","title":"Review PR #16215: Fix broken links in plugin docs","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16215 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16215\nAuthor: jeremylongshore\n\nFixes broken CONTRIBUTING and LICENSE links.\n- gh pr view 16215 --repo anthropics/claude-code\n- gh pr diff 16215 --repo anthropics/claude-code\n- If good: gh pr merge 16215 --repo anthropics/claude-code --squash","status":"hooked","priority":2,"issue_type":"task","assignee":"beads/crew/fang","created_at":"2026-01-08T14:20:05.178308-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:22:09.411632-08:00"}
{"id":"bd-z7w5p","title":"Review PR #16215: Fix broken links in plugin docs","description":"dispatched_by: beads/crew/emma\n\nReview and verify PR #16215 (anthropics/claude-code)\n\nPR: https://github.com/anthropics/claude-code/pull/16215\nAuthor: jeremylongshore\n\nFixes broken CONTRIBUTING and LICENSE links.\n- gh pr view 16215 --repo anthropics/claude-code\n- gh pr diff 16215 --repo anthropics/claude-code\n- If good: gh pr merge 16215 --repo anthropics/claude-code --squash","status":"closed","priority":2,"issue_type":"task","assignee":"beads/crew/fang","created_at":"2026-01-08T14:20:05.178308-08:00","created_by":"beads/crew/emma","updated_at":"2026-01-08T14:29:35.597578-08:00","closed_at":"2026-01-08T14:29:35.597578-08:00","close_reason":"Wrong repo - these were for anthropics/claude-code, not steveyegge/beads"}
{"id":"bd-z830","title":"Test child task","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-27T23:26:58.246573-08:00","created_by":"beads/crew/emma","updated_at":"2025-12-27T23:27:40.451603-08:00","closed_at":"2025-12-27T23:27:40.451603-08:00","dependencies":[{"issue_id":"bd-z830","depends_on_id":"bd-fbl9","type":"parent-child","created_at":"2025-12-27T23:27:02.984294-08:00","created_by":"daemon"}]}
{"id":"bd-z86n","title":"Code Review: PR #551 - Persist close_reason to issues table","description":"Code review of PR #551 which fixes close_reason persistence bug.\n\n## Summary\nThe PR correctly fixes a bug where close_reason was only stored in the events table, not in the issues.close_reason column. This caused `bd show --json` to return empty close_reason.\n\n## What Was Fixed\n- ✅ CloseIssue now updates both close_reason and closed_at\n- ✅ ReOpenIssue clears both close_reason and closed_at\n- ✅ Comprehensive tests added for both storage and CLI layers\n- ✅ Clear documentation in queries.go about dual storage strategy\n\n## Quality Assessment\n✅ Tests cover both storage layer and CLI JSON output\n✅ Handles reopen case (clearing close_reason)\n✅ Good comments explaining dual-storage design\n✅ No known issues\n\n## Potential Followups\nSee linked issues for suggestions.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-14T14:25:06.887069-08:00","updated_at":"2025-12-29T13:40:29.724656-08:00","closed_at":"2025-12-29T13:40:29.724656-08:00","close_reason":"Stale/spurious - test artifacts, merged PRs, or auto-close candidates"}
{"id":"bd-z8a6","title":"bd delete --from-file should add deleted issues to deletions manifest","description":"When using bd delete --from-file to bulk delete issues, the deleted issue IDs are not being added to the deletions.jsonl manifest.\n\nThis causes those issues to be resurrected during bd sync when git history scanning finds them in old commits.\n\nExpected: All deleted issues should be added to deletions.jsonl so they wont be reimported from git history.\n\nWorkaround: Manually add deletion records to deletions.jsonl.","status":"tombstone","priority":1,"issue_type":"bug","created_at":"2025-12-16T01:48:14.099855-08:00","updated_at":"2025-12-17T16:11:17.070763-08:00","deleted_at":"2025-12-17T16:11:17.070763-08:00","deleted_by":"batch delete","delete_reason":"batch delete","original_type":"bug"}