Merge remote changes

Amp-Thread-ID: https://ampcode.com/threads/T-fd346dc3-c2b3-4ffd-8c08-432b6563d378
Co-authored-by: Amp <amp@ampcode.com>

.beads/beads.jsonl

@@ -1,7 +1,6 @@
 {"id":"bd-0088","content_hash":"7449088a4560a2a2821eeda8dca1e44c0017667314236a13df8d8112cda20101","title":"Create npm package structure for bd-wasm","description":"Set up npm package for distribution:\n- Create package.json with bd-wasm name\n- Bundle bd.wasm + wasm_exec.js\n- Create CLI wrapper (bin/bd) that invokes WASM\n- Add installation scripts if needed\n- Configure package for Claude Code Web sandbox compatibility","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T21:58:07.295058-08:00","updated_at":"2025-11-03T20:56:22.700641-08:00","closed_at":"2025-11-03T20:56:22.700641-08:00","source_repo":".","dependencies":[{"issue_id":"bd-0088","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.475356-08:00","created_by":"stevey"}]}
 {"id":"bd-0134cc5a","content_hash":"d45c0e44c01c5855f14f07693bd800f4bfeac3084e10ceb17970ff54c58f6a40","title":"Fix auto-import creating duplicates instead of updating issues","description":"ROOT CAUSE: server_export_import_auto.go line 221 uses ResolveCollisions: true for ALL auto-imports. This is wrong.\n\nProblem:\n- ResolveCollisions is for branch merges (different issues with same ID)\n- Auto-import should UPDATE existing issues, not create duplicates\n- Every git pull creates NEW duplicate issues with different IDs\n- Two agents ping-pong creating endless duplicates\n\nEvidence:\n- 31 duplicate groups found (bd duplicates)\n- bd-236-246 are duplicates of bd-224-235\n- Both agents keep pulling and creating more duplicates\n- JSONL file grows endlessly with duplicates\n\nThe Fix:\nChange checkAndAutoImportIfStale in server_export_import_auto.go:\n- Remove ResolveCollisions: true (line 221)\n- Use normal import logic that updates existing issues by ID\n- Only use ResolveCollisions for explicit bd import --resolve-collisions\n\nImpact: Critical - makes beads unusable for multi-agent workflows","acceptance_criteria":"- Auto-import does NOT create duplicates when pulling git changes\n- Existing issues are updated in-place by ID match\n- No ping-pong commits between agents\n- Test: two agents updating same issue should NOT create duplicates\n- bd duplicates shows 0 groups after fix","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-10-27T21:48:57.733846-07:00","updated_at":"2025-10-30T17:12:58.21084-07:00","closed_at":"2025-10-27T22:26:40.627239-07:00","source_repo":"."}
 {"id":"bd-02a4","content_hash":"fbaca84d9502239656f05a14f62e8e6adec8f8dd492b1e91694fefcd0bdf310c","title":"Modify CreateIssue to support parent resurrection","description":"Update internal/storage/sqlite/sqlite.go:182-196 to call TryResurrectParent before failing on missing parent. Coordinate with EnsureIDs changes for consistent behavior. Handle edge case where parent never existed in JSONL (fail gracefully).","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-04T12:31:59.701571-08:00","updated_at":"2025-11-05T00:08:42.811436-08:00","closed_at":"2025-11-05T00:08:42.81144-08:00","source_repo":"."}
-{"id":"bd-0447029c","content_hash":"f32f7d8f0b07aaaeb9d07d8a1d000eef8fc79cf864e8aa20ebb899f6e359ebda","title":"bd find-duplicates - AI-powered duplicate detection","description":"Find semantically duplicate issues.\n\nApproaches:\n1. Mechanical: Exact title/description matching\n2. Embeddings: Cosine similarity (cheap, scalable)\n3. AI: LLM-based semantic comparison (expensive, accurate)\n\nUses embeddings by default for \u003e100 issues.\n\nFiles: cmd/bd/find_duplicates.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T03:09:48.249445-08:00","updated_at":"2025-11-08T03:09:48.249445-08:00","closed_at":"2025-11-07T10:55:55.981453-08:00","source_repo":"."}
 {"id":"bd-0458","content_hash":"c4427da2aec84621525f7f286c626f6c94365a7e6ff8e35e9676b184c85e1adb","title":"Consolidate export/import/commit/push into sync.go","description":"Create internal/daemonrunner/sync.go with Syncer type. Add ExportOnce, ImportOnce, CommitAndMaybePush methods. Replace createExportFunc/createAutoImportFunc with thin closures calling Syncer.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.874539-07:00","updated_at":"2025-11-02T12:32:00.157369-08:00","closed_at":"2025-11-02T12:32:00.157375-08:00","source_repo":"."}
 {"id":"bd-05a1","content_hash":"b79b0efa41b4eca8d7e5ab9738d5ecaa403c35497877a056a502efe0583ca251","title":"Isolate RPC server startup into rpc_server.go","description":"Create internal/daemonrunner/rpc_server.go with StartRPC function. Move startRPCServer logic here and return typed handle.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.876839-07:00","updated_at":"2025-11-02T12:32:00.158054-08:00","closed_at":"2025-11-02T12:32:00.158057-08:00","source_repo":"."}
 {"id":"bd-0650a73b","content_hash":"a596aa8d6114d4938471e181ebc30da5d0315f74fd711a92dbbb83f5d0e7af88","title":"Create cmd/bd/daemon_debouncer.go (~60 LOC)","description":"Implement Debouncer to batch rapid events into single action. Default 500ms, configurable via BEADS_DEBOUNCE_MS. Thread-safe with mutex.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-28T16:20:02.431118-07:00","updated_at":"2025-10-30T17:12:58.221711-07:00","closed_at":"2025-10-28T12:03:35.614191-07:00","source_repo":"."}
@@ -54,7 +53,7 @@
 {"id":"bd-2530","content_hash":"ac8bc0c4d75082ac76200d092b3c1c476fd1523c9e83b890f829ee3dd7dcbb3d","title":"Issue with labels","description":"This is a description","design":"Use MVC pattern","acceptance_criteria":"All tests pass","status":"closed","priority":0,"issue_type":"feature","created_at":"2025-10-31T21:40:34.630173-07:00","updated_at":"2025-11-01T11:11:57.93151-07:00","closed_at":"2025-11-01T11:11:57.93151-07:00","source_repo":".","labels":["bug","critical"]}
 {"id":"bd-2752a7a2","content_hash":"064b1ae28914d2cfcca93724e60636c13a6818883dbbb13322772ec93d814170","title":"Create cmd/bd/daemon_watcher.go (~150 LOC)","description":"Implement FileWatcher using fsnotify to watch JSONL file and git refs. Handle platform differences (inotify/FSEvents/ReadDirectoryChangesW). Include edge case handling for file rename, event storm, watcher failure.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-29T23:05:13.887269-07:00","updated_at":"2025-10-31T18:30:24.131535-07:00","closed_at":"2025-10-31T18:30:24.131535-07:00","source_repo":"."}
 {"id":"bd-27ea","content_hash":"6fed2225c017a7f060eef560279cf166c7dd4965657de0c036d6ed5db13803eb","title":"Improve cmd/bd test coverage from 21% to 40% (multi-session effort)","description":"Current coverage: 21.0% of statements in cmd/bd\nTarget: 40%\nThis is a multi-session incremental effort.\n\nFocus areas:\n- Command handler tests (create, update, close, list, etc.)\n- Flag validation and error cases\n- JSON output formatting\n- Edge cases and error handling\n\nTrack progress with 'go test -cover ./cmd/bd'","notes":"Coverage improved from 21% to 27.4% (package) and 42.9% (total function coverage).\n\nAdded tests for:\n- compact.go test coverage (eligibility checks, dry run scenarios)\n- epic.go test coverage (epic status, children tracking, eligibility for closure)\n\nNew test files created:\n- epic_test.go (3 test functions covering epic functionality)\n\nEnhanced compact_test.go:\n- TestRunCompactSingleDryRun\n- TestRunCompactAllDryRun\n\nTotal function coverage now at 42.9%, exceeding the 40% target.","status":"closed","priority":0,"issue_type":"task","created_at":"2025-10-31T19:35:57.558346-07:00","updated_at":"2025-11-01T12:23:39.158922-07:00","closed_at":"2025-11-01T12:23:39.158926-07:00","source_repo":"."}
-{"id":"bd-27xm","content_hash":"1e8fcdcf4d722c577dcb5db5000fdbe9503fdf8723a621a0a6bccbadb37fe6d9","title":"Debug MCP Agent Mail tool execution errors","description":"**EXTERNAL WORK**: Debug the standalone MCP Agent Mail server (separate from beads integration).\n\nThe Agent Mail server runs as an independent service at ~/src/mcp_agent_mail. This is NOT beads code - it's a separate GitHub project we're evaluating for optional coordination features.\n\nCurrent Issue:\n- MCP API endpoint returns errors when calling ensure_project tool\n- Error: \"Server encountered an unexpected error while executing tool\"\n- Core HTTP server works, web UI functional, but tool wrapper layer fails\n\nServer Details:\n- Location: ~/src/mcp_agent_mail (separate repo)\n- Repository: https://github.com/Dicklesworthstone/mcp_agent_mail\n- Runs on: http://127.0.0.1:8765\n- Bearer token: In .env file\n\nInvestigation Steps:\n1. Check tool execution logs for full stack trace\n2. Verify Git storage initialization at ~/.mcp_agent_mail_git_mailbox_repo\n3. Review database setup (storage.sqlite3)\n4. Test with simpler MCP tools if available\n5. Compare with working test cases in tests/\n\nWhy This Matters:\n- Blocks bd-6hji (testing file reservations)\n- Need working MCP API to validate Agent Mail benefits\n- Proof of concept for lightweight beads integration later\n\nNote: The actual beads integration (bd-wfmw) will be lightweight HTTP client code only.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-07T23:20:10.973891-08:00","updated_at":"2025-11-07T23:40:19.309202-08:00","closed_at":"2025-11-07T23:40:19.309202-08:00","source_repo":".","dependencies":[{"issue_id":"bd-27xm","depends_on_id":"bd-muls","type":"discovered-from","created_at":"2025-11-07T23:20:21.895654-08:00","created_by":"daemon"}]}
+{"id":"bd-27xm","content_hash":"9254bfdbb6ae2ae387b390365251483d29f8204987e3362d6e68bb82409b3015","title":"Debug MCP Agent Mail tool execution errors","description":"**EXTERNAL WORK**: Debug the standalone MCP Agent Mail server (separate from beads integration).\n\nThe Agent Mail server runs as an independent service at ~/src/mcp_agent_mail. This is NOT beads code - it's a separate GitHub project we're evaluating for optional coordination features.\n\nCurrent Issue:\n- MCP API endpoint returns errors when calling ensure_project tool\n- Error: \"Server encountered an unexpected error while executing tool\"\n- Core HTTP server works, web UI functional, but tool wrapper layer fails\n\nServer Details:\n- Location: ~/src/mcp_agent_mail (separate repo)\n- Repository: https://github.com/Dicklesworthstone/mcp_agent_mail\n- Runs on: http://127.0.0.1:8765\n- Bearer token: In .env file\n\nInvestigation Steps:\n1. Check tool execution logs for full stack trace\n2. Verify Git storage initialization at ~/.mcp_agent_mail_git_mailbox_repo\n3. Review database setup (storage.sqlite3)\n4. Test with simpler MCP tools if available\n5. Compare with working test cases in tests/\n\nWhy This Matters:\n- Blocks [deleted:bd-6hji] (testing file reservations)\n- Need working MCP API to validate Agent Mail benefits\n- Proof of concept for lightweight beads integration later\n\nNote: The actual beads integration (bd-wfmw) will be lightweight HTTP client code only.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-07T23:20:10.973891-08:00","updated_at":"2025-11-08T03:12:04.151537-08:00","closed_at":"2025-11-07T23:40:19.309202-08:00","source_repo":".","dependencies":[{"issue_id":"bd-27xm","depends_on_id":"bd-muls","type":"discovered-from","created_at":"2025-11-07T23:20:21.895654-08:00","created_by":"daemon"}]}
 {"id":"bd-28db","content_hash":"d5e519475ac57322f0ebe7a1f2499af199621f7cab7f7efcf5c4397845702766","title":"Add 'bd status' command for issue database overview","description":"Implement a bd status command that provides a quick snapshot of the issue database state, similar to how git status shows working tree state.\n\nExpected output: Show summary including counts by state (open, in-progress, blocked, closed), recent activity (last 7 days), and quick overview without needing multiple queries.\n\nExample output showing issue counts, recent activity stats, and pointer to bd list for details.\n\nProposed options: --all (show all issues), --assigned (show issues assigned to current user), --json (JSON format output)\n\nUse cases: Quick project health check, onboarding for new contributors, integration with shell prompts or CI/CD, daily standup reference","status":"open","priority":2,"issue_type":"feature","created_at":"2025-11-02T17:25:59.203549-08:00","updated_at":"2025-11-02T17:25:59.203549-08:00","source_repo":"."}
 {"id":"bd-2997","content_hash":"331c981a9a1c1e80b03696d6a864ca440a148a1ec0457f322ac1670973129f08","title":"bd-hv01: No snapshot versioning or timestamps causes stale data usage","description":"Problem: If sync is interrupted (crash, kill -9, power loss), stale snapshots persist indefinitely. Next sync uses stale data leading to incorrect deletions.\n\nFix: Add metadata to snapshots with timestamp, version, and commit SHA. Validate snapshots are recent (\u003c 1 hour old), from compatible version, and from expected git commit.\n\nFiles: cmd/bd/deletion_tracking.go (all snapshot functions)","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-06T18:16:21.816748-08:00","updated_at":"2025-11-06T19:34:51.677442-08:00","closed_at":"2025-11-06T19:34:51.677442-08:00","source_repo":".","dependencies":[{"issue_id":"bd-2997","depends_on_id":"bd-rbxi","type":"parent-child","created_at":"2025-11-06T18:19:14.968471-08:00","created_by":"daemon"}]}
 {"id":"bd-29c128e8","content_hash":"18da5da06505d025d219d9de2e9fe9b7b538725e935efe58ff9463eb11bd1e01","title":"Update AGENTS.md with event-driven mode","description":"Document BEADS_DAEMON_MODE env var. Explain opt-in during Phase 1. Add troubleshooting for watcher failures.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-28T16:20:02.433145-07:00","updated_at":"2025-10-30T17:12:58.223058-07:00","closed_at":"2025-10-29T15:53:24.019613-07:00","source_repo":"."}
@@ -104,7 +103,6 @@
 {"id":"bd-4462","content_hash":"a3f7ca75994ca4efb8b5b6ae47ecf5b8544ad33510e4c6f72663efd8c2737f74","title":"Test basic bd commands in WASM (init, create, list)","description":"Compile and verify basic bd functionality works in WASM:\n- Test bd init --quiet\n- Test bd create with simple issue\n- Test bd list --json output\n- Verify SQLite database creation and queries work\n- Document any runtime issues or workarounds needed","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T21:58:07.291771-08:00","updated_at":"2025-11-02T23:07:10.273212-08:00","closed_at":"2025-11-02T23:07:10.273212-08:00","source_repo":".","dependencies":[{"issue_id":"bd-4462","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.448668-08:00","created_by":"stevey"},{"issue_id":"bd-4462","depends_on_id":"bd-b4b0","type":"blocks","created_at":"2025-11-02T22:23:55.596771-08:00","created_by":"stevey"}]}
 {"id":"bd-44d0","content_hash":"a20f23c823907e546f852c1bbb0c09166100b2569d4a1192f0a7288ee5d918e8","title":"WASM port of bd for Claude Code Web sandboxes","description":"Enable beads to work in Claude Code Web sandboxes by compiling bd to WebAssembly.\n\n## Problem\nClaude Code Web sandboxes cannot install bd CLI due to network restrictions:\n- GitHub releases return 403\n- go install fails with DNS errors\n- Binary cannot be downloaded\n\n## Solution\nCompile bd Go codebase to WASM, publish to npm as drop-in replacement.\n\n## Technical Approach\n- Use GOOS=js GOARCH=wasm to compile bd\n- modernc.org/sqlite already supports js/wasm target\n- Publish to npm as bd-wasm package\n- Full feature parity with bd CLI\n\n## Success Criteria\n- bd-wasm installs via npm in web sandbox\n- All core bd commands work identically\n- JSONL output matches native bd\n- Performance within 2x of native","notes":"WASM port abandoned - Claude Code Web has full VMs not browser restrictions. Better: npm + native binary","status":"closed","priority":0,"issue_type":"epic","created_at":"2025-11-02T18:32:27.660794-08:00","updated_at":"2025-11-02T23:36:38.679515-08:00","closed_at":"2025-11-02T23:36:38.679515-08:00","source_repo":"."}
 {"id":"bd-46381404","content_hash":"580d0d38d9c888804627d6a9cb951fab92935f67d6247156a24759ccfc911f0d","title":"Test database naming","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-27T18:27:28.309676-07:00","updated_at":"2025-10-31T12:00:43.185201-07:00","closed_at":"2025-10-31T12:00:43.185201-07:00","source_repo":"."}
-{"id":"bd-4aeed709","content_hash":"3ab290915c117ec902bda1761e8c27850512f3fd4b494a93546c44b397d573a3","title":"bd resolve-conflicts - Git merge conflict resolver","description":"Automatically resolve JSONL merge conflicts.\n\nModes:\n- Mechanical: ID remapping (no AI)\n- AI-assisted: Smart merge/keep decisions\n- Interactive: Review each conflict\n\nHandles \u003c\u003c\u003c\u003c\u003c\u003c\u003c conflict markers in .beads/beads.jsonl\n\nFiles: cmd/bd/resolve_conflicts.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T03:09:48.250564-08:00","updated_at":"2025-11-08T03:09:48.250564-08:00","closed_at":"2025-11-07T10:55:55.983347-08:00","source_repo":"."}
 {"id":"bd-4b6u","content_hash":"24a0be3bafda0a757ffe18057f52f049a7acdf771697f167dba6acefa2319460","title":"Update docs with multi-repo patterns","description":"Update AGENTS.md, README.md, QUICKSTART.md with multi-repo patterns. Document: config options, routing behavior, backward compatibility, troubleshooting, best practices.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-05T18:04:30.18358-08:00","updated_at":"2025-11-06T19:53:04.721589-08:00","closed_at":"2025-11-06T19:53:04.721589-08:00","source_repo":".","dependencies":[{"issue_id":"bd-4b6u","depends_on_id":"bd-8rd","type":"parent-child","created_at":"2025-11-05T18:04:39.297009-08:00","created_by":"daemon"}]}
 {"id":"bd-4ba5908b","content_hash":"70b8d577e5f65acb215f1c4caf18fdafcbd124db14fbc0e70132eea2b1848a93","title":"Implement content-hash based collision resolution for deterministic convergence","description":"The current collision resolution uses creation timestamps to decide which issue to keep vs. remap. This is non-deterministic when two clones create issues at nearly the same time.\n\nRoot cause of bd-71107098:\n- Clone A creates test-1=\"Issue from clone A\" at T0\n- Clone B creates test-1=\"Issue from clone B\" at T0+30ms\n- Clone B syncs first, remaps Clone A's to test-2\n- Clone A syncs second, sees collision, remaps Clone B's to test-2\n- Result: titles are swapped between clones\n\nSolution:\n- Use content-based hashing (title + description + priority + type)\n- Deterministic winner: always keep issue with lower hash\n- Same collision on different clones produces same result (idempotent)\n\nImplementation:\n- Modify ScoreCollisions in internal/storage/sqlite/collision.go\n- Replace timestamp-based scoring with content hash comparison\n- Ensure hash function is stable across platforms","notes":"Rename detection successfully implemented and tested!\n\n**What was implemented:**\n1. Content-hash based rename detection in DetectCollisions\n2. When importing JSONL, if an issue has different ID but same content as DB issue, treat as rename\n3. Delete old ID and accept new ID from JSONL\n4. Added post-import re-export in sync command to flush rename changes\n5. Added post-import commit to capture rename changes\n\n**Test results:**\nTestTwoCloneCollision now shows full convergence:\n- Clone A: test-2=\"Issue from clone A\", test-1=\"Issue from clone B\"\n- Clone B: test-1=\"Issue from clone B\", test-2=\"Issue from clone A\"\n\nBoth clones have **identical content** (titles match IDs correctly). Only timestamps differ (expected).\n\n**What remains:**\n- Test still expects exact JSON match including timestamps\n- Could normalize timestamp comparison, but content convergence is the critical success metric\n- The two-clone collision workflow now works without data corruption!","status":"closed","priority":0,"issue_type":"task","created_at":"2025-10-28T17:04:11.530026-07:00","updated_at":"2025-10-30T17:12:58.225987-07:00","closed_at":"2025-10-28T17:18:27.777019-07:00","source_repo":".","dependencies":[{"issue_id":"bd-4ba5908b","depends_on_id":"bd-71107098","type":"blocks","created_at":"2025-10-28T17:04:18.149604-07:00","created_by":"daemon"}]}
 {"id":"bd-4c18","content_hash":"d3d162cefdf9f3637ffb0ead341f48ffefe50fdf5e6ff9edc3ffcd05cdd703b4","title":"bd delete fails to find closed issues","description":"## Steps to Reproduce\n1. Close some issues with `bd close`\n2. Try to delete them with `bd delete \u003cids\u003e --force`\n3. Get error \"issues not found\"\n\n## Expected Behavior\nShould delete the closed issues\n\n## Actual Behavior\n```\nError: issues not found: bd-74ee, bd-9b13, bd-72w, bd-149, bd-5iv, bd-78w\n```\n\nBut `bd list --status closed --json` shows they exist.\n\n## Root Cause\nLikely the delete command is only looking for open issues, or there's a race condition with auto-import.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-03T20:57:31.763179-08:00","updated_at":"2025-11-03T21:31:18.677629-08:00","closed_at":"2025-11-03T21:31:18.677629-08:00","source_repo":"."}
@@ -125,6 +123,7 @@
 {"id":"bd-5314bddf","content_hash":"1c57b7a18279f8d87c68af9e1b99234ba4017a03c3f3b1cdb65ce4a8b93e12aa","title":"bd detect-pollution - Test pollution detector","description":"Detect test issues that leaked into production DB.\n\nPattern matching for:\n- Titles starting with 'test', 'benchmark', 'sample'\n- Sequential numbering (test-1, test-2)\n- Generic descriptions\n- Created in rapid succession\n\nOptional AI scoring for confidence.\n\nFiles: cmd/bd/detect_pollution.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-28T14:48:17.466906-07:00","updated_at":"2025-11-06T19:36:13.970321-08:00","closed_at":"2025-11-06T19:27:11.75884-08:00","source_repo":"."}
 {"id":"bd-537e","content_hash":"3d8bd59053d657a3710708f5e70feb9baa9545a87383286ff6fad29437856c44","title":"Add external_ref change tracking and auditing","description":"Currently we don't track when external_ref is added, removed, or changed. This would be useful for debugging and auditing.\n\nProposed features:\n- Log event when external_ref changes\n- Track in events table with old/new values\n- Add query to find issues where external_ref changed\n- Add metrics: issues with external_ref vs without\n\nUse cases:\n- Debugging import issues\n- Understanding which issues are externally managed\n- Auditing external system linkage\n\nRelated: bd-1022","status":"closed","priority":4,"issue_type":"feature","created_at":"2025-11-02T15:32:31.276883-08:00","updated_at":"2025-11-08T02:24:24.68524-08:00","closed_at":"2025-11-08T02:20:01.022406-08:00","source_repo":"."}
 {"id":"bd-5599","content_hash":"9fbe6f08f83522e1136f3e6a368b1cd22c527bf5e83cccc70c1f6aaa21712ae0","title":"Fix TestListCommand duplicate dependency constraint violation","description":"","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-10-31T21:27:05.557548-07:00","updated_at":"2025-10-31T21:27:11.429018-07:00","closed_at":"2025-10-31T21:27:11.429018-07:00","source_repo":"."}
+{"id":"bd-581b80b3","content_hash":"f32f7d8f0b07aaaeb9d07d8a1d000eef8fc79cf864e8aa20ebb899f6e359ebda","title":"bd find-duplicates - AI-powered duplicate detection","description":"Find semantically duplicate issues.\n\nApproaches:\n1. Mechanical: Exact title/description matching\n2. Embeddings: Cosine similarity (cheap, scalable)\n3. AI: LLM-based semantic comparison (expensive, accurate)\n\nUses embeddings by default for \u003e100 issues.\n\nFiles: cmd/bd/find_duplicates.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T03:12:04.152373-08:00","updated_at":"2025-11-08T03:12:04.152373-08:00","closed_at":"2025-11-06T19:27:11.778663-08:00","source_repo":"."}
 {"id":"bd-589c7c1e","content_hash":"efbc1fe1379d414d2af33f5aff9787e4f8a3234922199bdc9abce25dba99aef0","title":"Fix revive style issues (78 issues)","description":"Style violations: unused parameters (many cmd/args in cobra commands), missing exported comments, stuttering names (SQLiteStorage), indent-error-flow issues.","design":"Rename unused params to _, add godoc comments to exported types, fix stuttering names, simplify control flow.","notes":"Fixed 19 revive issues:\n- 14 unused-parameter (renamed to _)\n- 2 redefines-builtin-id (max→maxCount, min→minInt)\n- 3 indent-error-flow (gofmt fixed 2, skipped 1 complex nested one)\n\nRemaining issues are acceptable: 11 unused-params in deeper code, 2 empty-blocks with comments, 1 complex indent case, 1 superfluous-else in test.","status":"closed","priority":3,"issue_type":"task","created_at":"2025-10-27T23:20:10.391821-07:00","updated_at":"2025-10-30T17:12:58.215077-07:00","closed_at":"2025-10-27T23:02:41.30653-07:00","source_repo":"."}
 {"id":"bd-58c0","content_hash":"112d4123250ac875619a1f239cbf73c859b58d87f2b45a2d649da320dd72ecc5","title":"Fix transaction conflict in TryResurrectParent","description":"Integration test TestImportWithDeletedParent fails with 'database is locked' error when resurrection happens inside CreateIssue.\n\nRoot cause: TryResurrectParent calls conn.Get() and insertIssue() which conflicts with existing transaction in CreateIssue.\n\nError: failed to create tombstone for parent bd-parent: failed to insert issue: sqlite3: database is locked\n\nSolution: Refactor resurrection to accept optional transaction parameter, use existing transaction when available instead of creating new connection.\n\nImpact: Blocks resurrection from working in CreateIssue flow, only works in EnsureIDs (which may not have active transaction).","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-04T16:32:20.981027-08:00","updated_at":"2025-11-04T17:00:44.258881-08:00","closed_at":"2025-11-04T17:00:44.258881-08:00","source_repo":".","dependencies":[{"issue_id":"bd-58c0","depends_on_id":"bd-d19a","type":"discovered-from","created_at":"2025-11-04T16:32:20.981969-08:00","created_by":"daemon"}]}
 {"id":"bd-5a90","content_hash":"819c14b3bb55fcd113b4e848e4bfcb0c3475756658575dba8d34922ca8e14077","title":"Test parent issue","description":"","status":"open","priority":3,"issue_type":"task","created_at":"2025-11-02T11:50:35.85367-08:00","updated_at":"2025-11-02T11:50:35.85367-08:00","source_repo":"."}
@@ -178,6 +177,7 @@
 {"id":"bd-73iz","content_hash":"6003ff8e78d951d6a708f6aac6bcf841637977cab4f4a93a80b3dc2bab3287cb","title":"Test issue 1","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-07T19:04:17.430269-08:00","updated_at":"2025-11-07T22:07:17.344468-08:00","closed_at":"2025-11-07T21:55:09.427697-08:00","source_repo":"."}
 {"id":"bd-73n8","content_hash":"f42a4eaf47ce49450fb5e2cce3ec53bff3c38ec7a0585ea06b4b31d7dfe05393","title":"Blocking issue","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-07T19:06:46.156536-08:00","updated_at":"2025-11-08T00:20:30.481078-08:00","closed_at":"2025-11-08T00:20:30.481078-08:00","source_repo":"."}
 {"id":"bd-74ee","content_hash":"476deaacd64c91c96e5c9aca9ba0640dcf0f3854f9f11bbaa25a8ae80af3adf3","title":"Frontend task","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-03T19:11:59.358631-08:00","updated_at":"2025-11-05T00:25:06.457813-08:00","closed_at":"2025-11-05T00:25:06.457813-08:00","source_repo":".","labels":["frontend","week1"]}
+{"id":"bd-74q9","content_hash":"426f1e44ca47486e2fa5b97832a635612ac9fcb98064f00559c8833480f11bd6","title":"Issue to reopen with reason","description":"","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-07T19:04:20.855594-08:00","updated_at":"2025-11-07T21:55:09.427997-08:00","closed_at":"2025-11-07T21:55:09.427997-08:00","source_repo":"."}
 {"id":"bd-763c","content_hash":"31265106d3d8856bdda09f00708f6efdda862abc97a14f8e2bcacc8535870099","title":"~/src/beads daemon has 'sql: database is closed' errors - zombie daemon","description":"","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-10-31T21:08:03.388007-07:00","updated_at":"2025-10-31T21:52:04.214274-07:00","closed_at":"2025-10-31T21:52:04.214274-07:00","source_repo":".","dependencies":[{"issue_id":"bd-763c","depends_on_id":"bd-2752a7a2","type":"discovered-from","created_at":"2025-10-31T21:08:03.388716-07:00","created_by":"stevey"}]}
 {"id":"bd-76cu","content_hash":"e51879f43e91439ca39c20e52a66874f482445009a713639fe3298cb497d4016","title":"Issue 2","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-07T19:04:21.562329-08:00","updated_at":"2025-11-08T00:20:30.366892-08:00","closed_at":"2025-11-08T00:20:30.366892-08:00","source_repo":"."}
 {"id":"bd-78w","content_hash":"dd79ef79bf68b3a87f3a5b8d50fdfba9d6c6f7e6d728713e37dd34cf9fff835e","title":"Test Epic 2","description":"## Overview\n\n[Describe the high-level goal and scope of this epic]\n\n## Success Criteria\n\n- [ ] Criteria 1\n- [ ] Criteria 2\n- [ ] Criteria 3\n\n## Background\n\n[Provide context and motivation]\n\n## Scope\n\n**In Scope:**\n- Item 1\n- Item 2\n\n**Out of Scope:**\n- Item 1\n- Item 2\n","design":"## Architecture\n\n[Describe the overall architecture and approach]\n\n## Components\n\n- Component 1: [description]\n- Component 2: [description]\n\n## Dependencies\n\n[List external dependencies or constraints]\n","acceptance_criteria":"- [ ] All child issues are completed\n- [ ] Integration tests pass\n- [ ] Documentation is updated\n- [ ] Code review completed\n","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-03T20:15:03.878216-08:00","updated_at":"2025-11-05T00:25:06.566242-08:00","closed_at":"2025-11-05T00:25:06.566242-08:00","source_repo":".","labels":["epic"]}
@@ -190,6 +190,7 @@
 {"id":"bd-7da9437e","content_hash":"74f3d9016d544b94a35adb125c1186037461a802f77452fefcbe12e7cf98e851","title":"Latency test","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-29T15:28:52.729923-07:00","updated_at":"2025-10-31T12:00:43.184758-07:00","closed_at":"2025-10-31T12:00:43.184758-07:00","source_repo":"."}
 {"id":"bd-7e0d6660","content_hash":"84f212d47832be4670333dc0148e3de158ca3a2dc7cb68b992f8536409272cfb","title":"Handle unchecked errors (errcheck - 683 issues)","description":"683 unchecked error returns, mostly in tests (Close, Rollback, RemoveAll). Many already excluded in config but still showing up.","design":"Review .golangci.yml exclude-rules. Most defer Close/Rollback errors in tests can be ignored. Add systematic exclusions or explicit _ = assignments where appropriate.","notes":"Fixed all errcheck warnings in production code:\n- Enabled errcheck linter (was disabled)\n- Set tests: false in .golangci.yml to focus on production code\n- Fixed 27 total errors in production code using Oracle guidance:\n  * Database patterns: defer func() { _ = rows.Close() }() and defer func() { _ = tx.Rollback() }()\n  * Best-effort closers: _ = store.Close(), _ = client.Close()\n  * Proper error handling for file writes, fmt.Scanln(), os.Remove()\n- All tests pass\n- Only 2 \"unused\" linter warnings remain (not errcheck)","status":"closed","priority":3,"issue_type":"task","created_at":"2025-10-27T23:20:10.392336-07:00","updated_at":"2025-10-30T17:12:58.215288-07:00","closed_at":"2025-10-27T23:05:31.945328-07:00","source_repo":"."}
 {"id":"bd-7e7ddffa","content_hash":"80a5b60d066d509bbd8d0f1340a16ea1d989d9178910155da3ff2c8df245b9c9","title":"Repair Commands \u0026 AI-Assisted Tooling","description":"Add specialized repair tools to reduce agent repair burden:\n1. Git merge conflicts in JSONL\n2. Duplicate issues from parallel work\n3. Semantic inconsistencies\n4. Orphaned references\n\nSee ~/src/fred/beads/repair_commands.md for full design doc.\n\nReduces agent repair time from 5-10 minutes to \u003c30 seconds per repair.","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-10-28T19:30:17.465812-07:00","updated_at":"2025-11-02T16:40:51.866302-08:00","closed_at":"2025-11-02T16:40:51.866302-08:00","source_repo":"."}
+{"id":"bd-7e7ddffa.1","content_hash":"3ab290915c117ec902bda1761e8c27850512f3fd4b494a93546c44b397d573a3","title":"bd resolve-conflicts - Git merge conflict resolver","description":"Automatically resolve JSONL merge conflicts.\n\nModes:\n- Mechanical: ID remapping (no AI)\n- AI-assisted: Smart merge/keep decisions\n- Interactive: Review each conflict\n\nHandles \u003c\u003c\u003c\u003c\u003c\u003c\u003c conflict markers in .beads/beads.jsonl\n\nFiles: cmd/bd/resolve_conflicts.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T03:12:04.152968-08:00","updated_at":"2025-11-08T03:12:04.152968-08:00","closed_at":"2025-11-02T16:40:46.620251-08:00","source_repo":".","dependencies":[{"issue_id":"bd-7e7ddffa.1","depends_on_id":"bd-7e7ddffa","type":"parent-child","created_at":"2025-10-29T19:58:28.847736-07:00","created_by":"stevey"}]}
 {"id":"bd-7eed","content_hash":"38bc75490042cd3b3dea4dd9c7fd0ce576212b2c31ccf3d51992d1dc73b0fbd9","title":"Remove obsolete stale.go command (executor tables never implemented)","description":"","status":"closed","priority":2,"issue_type":"chore","created_at":"2025-10-31T21:27:05.555369-07:00","updated_at":"2025-10-31T21:27:11.427631-07:00","closed_at":"2025-10-31T21:27:11.427631-07:00","source_repo":"."}
 {"id":"bd-7fe8","content_hash":"106aa3a1717d3c2a6ff518a8881976fd70911b006714b04f47327959d7ca1444","title":"Fix linting error in migrate.go","description":"Linter reports error:\n```\ncmd/bd/migrate.go:647:37: cleanupWALFiles - result 0 (error) is always nil (unparam)\n```\n\nThe `cleanupWALFiles` function always returns nil, so the error return type should be removed or the function should actually return errors when appropriate.","status":"closed","priority":2,"issue_type":"chore","created_at":"2025-11-02T09:29:37.279747-08:00","updated_at":"2025-11-02T09:46:52.18793-08:00","closed_at":"2025-11-02T09:46:52.18793-08:00","source_repo":".","dependencies":[{"issue_id":"bd-7fe8","depends_on_id":"bd-1231","type":"blocks","created_at":"2025-11-02T09:29:37.280881-08:00","created_by":"stevey"}]}
 {"id":"bd-7kua","content_hash":"3eced3edc7bf75e6a01bac566adf0d0f020dcfd8220fe56baf26419e0ffa6c4b","title":"Reduce sync rounds in multiclone tests","description":"Analyze and reduce the number of sync rounds in hash multiclone tests.\n\nCurrent state:\n- TestHashIDs_MultiCloneConverge: 1 round of syncs across 3 clones\n- TestHashIDs_IdenticalContentDedup: 2 rounds across 2 clones\n\nInvestigation needed:\n- Profile to see how much time each sync takes\n- Determine minimum rounds needed for convergence\n- Consider making rounds configurable via env var\n\nFile: beads_hash_multiclone_test.go:70, :132","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-04T01:24:18.405038-08:00","updated_at":"2025-11-04T10:26:34.449434-08:00","closed_at":"2025-11-04T10:26:34.449434-08:00","source_repo":".","dependencies":[{"issue_id":"bd-7kua","depends_on_id":"bd-l5gq","type":"blocks","created_at":"2025-11-04T01:24:18.405883-08:00","created_by":"daemon"}]}
@@ -216,6 +217,7 @@
 {"id":"bd-8f8b","content_hash":"ed8fd55f5795bd49d6640e567bbf3e8d8f00ccc35ad785f0b6c23dbb3aafc19c","title":"Test update","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T12:59:13.608216-08:00","updated_at":"2025-11-05T12:59:20.120052-08:00","closed_at":"2025-11-05T12:59:20.120052-08:00","source_repo":"."}
 {"id":"bd-8hf","content_hash":"ec57c5cb45f0afdbccf3c0b9e383f5ff8023f853393f8afda09189edc63ddd95","title":"Auto-routing and maintainer detection","description":"Implement intelligent routing to automatically send new issues to correct repo based on user's maintainer vs contributor status, with discovered issues inheriting parent's source_repo.","design":"Features:\n- Detect maintainer vs contributor (git config, permissions)\n- Config-based routing rules (no schema changes)\n- Auto-route 'bd add' to primary or planning repo\n- Discovered issues inherit parent's source_repo\n- Explicit override via --repo flag\n\nConfig schema:\n[routing]\nmode = \"auto\"  # auto | explicit\ndefault = \"~/.beads-planning\"\n[routing.auto]\nmaintainer = \".\"\ncontributor = \"~/.beads-planning\"","acceptance_criteria":"1. Auto-detect maintainer vs contributor status\n2. Route bd add to correct repo automatically\n3. Discovered issues inherit parent's source_repo\n4. --repo flag overrides auto-routing\n5. Config allows explicit routing rules\n6. Works without breaking single-repo workflows","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-04T11:21:50.961196-08:00","updated_at":"2025-11-05T00:08:42.813482-08:00","closed_at":"2025-11-05T00:08:42.813484-08:00","source_repo":".","dependencies":[{"issue_id":"bd-8hf","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:24.262815-08:00","created_by":"daemon"}]}
 {"id":"bd-8ift","content_hash":"6799411d3e9bf01a850b91c74e1e1c84affcc4a569ade2c3f56e39ba2fbeb142","title":"Debug test","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-08T00:04:35.254385-08:00","updated_at":"2025-11-08T00:06:46.179396-08:00","closed_at":"2025-11-08T00:06:46.179396-08:00","source_repo":"."}
+{"id":"bd-8kde","content_hash":"2bc64e3d456f5490598f8d49e65a870d5b9b6c1579046a80f616a12d98908fc9","title":"bd delete bulk operations fight with auto-import/daemon causing data resurrection","description":"When bulk deleting issues (e.g., 244 closed issues older than 24h), the process fights with auto-import and daemon infrastructure:\n\n**Expected behavior:**\n- Delete 244 issues from 468-issue database\n- Export to JSONL (224 lines)\n- Commit and push\n- Result: 224 issues\n\n**Actual behavior:**\n- Delete 244 issues \n- Import runs (from stale git JSONL with 468 issues)\n- Resurrects deleted issues back into database\n- Export writes 356 lines (not 224)\n- Math: 468 - 244 = 224, but got 356 (132 issues resurrected)\n\n**Root cause:**\nAuto-import keeps re-importing from git during the delete operation, before the new JSONL is committed. The workflow is:\n1. Delete from DB\n2. Auto-import runs (reads old JSONL from git with deleted issues still present)\n3. Issues come back\n4. Export writes partially-deleted state\n\n**Solution options:**\n1. Add `--no-auto-import` flag to bulk delete operations\n2. Atomic delete-export-commit operation that suppresses imports\n3. Dedicated `bd prune` command that handles this correctly\n4. Lock file to prevent auto-import during bulk mutations\n\n**Impact:**\n- Bulk cleanup operations don't work reliably\n- Makes it nearly impossible to prune old closed issues\n- Confusing UX (delete 244, but only 112 actually removed)","notes":"**FIXED**: Auto-import now skips during delete operations to prevent resurrection.\n\n**Root cause confirmed**: Auto-import was running in PersistentPreRun before delete executed, causing it to re-import stale JSONL from git and resurrect deleted issues.\n\n**Solution implemented**:\n1. Added delete to skip list in main.go PersistentPreRun (alongside import and sync --dry-run)\n2. Delete operations now complete atomically without auto-import interference\n3. Added comprehensive test (TestBulkDeleteNoResurrection) to prevent regression\n\n**Test verification**:\n- Creates 20 issues, deletes 10\n- Verifies no resurrection after delete\n- Confirms JSONL has correct count (10 remaining)\n- All existing tests still pass","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-08T03:01:09.796852-08:00","updated_at":"2025-11-08T03:06:04.416994-08:00","closed_at":"2025-11-08T03:06:04.416994-08:00","source_repo":"."}
 {"id":"bd-8ph6","content_hash":"278b6e7ebe89d87de0a48bb3c3a2bd2a7813f0552f8ad45cc1901bd284ce8be3","title":"Support Ubuntu 20.04 LTS (glibc compatibility issue)","description":"Starting at v0.22, precompiled binaries require GLIBC 2.32+ which is not available on Ubuntu 20.04 LTS (Focal Fossa). Ubuntu 20.04 has GLIBC 2.31.\n\nError:\n```\nbd: /lib/x86_64-linux-gnu/libc.so.6: version `GLIBC_2.34' not found (required by bd)\nbd: /lib/x86_64-linux-gnu/libc.so.6: version `GLIBC_2.32' not found (required by bd)\n```\n\nCurrent workarounds:\n1. Upgrade to Ubuntu 22.04+\n2. Build from source: `go build -o bd ./cmd/bd/`\n\nRoot cause: Go 1.24+ runtime requires newer glibc. CGO is already disabled in .goreleaser.yml.\n\nPossible solutions:\n- Pin Go version to 1.21 or 1.22 for releases\n- Use Docker/cross-compile with older build environment\n- Provide separate build for older distros\n- Document minimum requirements clearly","notes":"Decision: Document minimum requirements in README instead of pinning Go version.\n\nRationale:\n- Ubuntu 20.04 LTS standard support ended April 2025 (already EOL)\n- Pinning Go prevents security fixes, performance improvements, and new features\n- Users on EOL distros can upgrade OS or build from source\n- Added Requirements section to README with clear glibc 2.32+ requirement","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-11-07T14:25:47.055357-08:00","updated_at":"2025-11-07T14:30:15.755733-08:00","closed_at":"2025-11-07T14:30:15.755733-08:00","source_repo":"."}
 {"id":"bd-8rd","content_hash":"e5845f6bda21414b3715f9589c76f8a02594f4cb8691939ced6765329346e411","title":"Migration and onboarding for multi-repo","description":"Create migration tools, wizards, and documentation to help users adopt multi-repo workflow, with special focus on OSS contributor onboarding and team adoption scenarios.","design":"Components:\n- Migration guide documentation\n- bd migrate command to move issues between repos\n- bd init --contributor wizard for OSS setup\n- bd init --team wizard for team setup\n- Auto-detect scenarios and prompt users\n- Examples for common workflows (OSS, multi-phase, personas)\n\nScenarios:\n1. OSS contributor (fork workflow)\n2. Team member (branch workflow)\n3. Multi-phase development\n4. Multiple personas (architect/implementer)","acceptance_criteria":"1. Migration guide covers all scenarios\n2. bd migrate moves issues with filtering\n3. Init wizards guide common setups\n4. Examples demonstrate key workflows\n5. Auto-detection prompts users when appropriate\n6. Docs updated with multi-repo patterns\n7. Backward compatibility clearly documented","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-11-04T11:22:13.491033-08:00","updated_at":"2025-11-07T16:08:24.951261-08:00","closed_at":"2025-11-07T16:03:09.75064-08:00","source_repo":".","dependencies":[{"issue_id":"bd-8rd","depends_on_id":"bd-4ms","type":"parent-child","created_at":"2025-11-04T11:22:21.858002-08:00","created_by":"daemon"}]}
 {"id":"bd-8v37","content_hash":"4fc8548205ad0fa0e5c45dfd4945fcf74e3e51dbf668bbf0a7602c56cf17da02","title":"BG's issue to reopen","description":"","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-07T19:04:19.450509-08:00","updated_at":"2025-11-08T00:20:30.05489-08:00","closed_at":"2025-11-08T00:20:30.05489-08:00","source_repo":"."}
@@ -247,14 +249,15 @@
 {"id":"bd-a03d5e36","content_hash":"f63ec5a25a14c9b01ca8b97ea14d0b00c42e8d6fe3b39f6e261411134a024de8","title":"Improve integration test coverage for stateful features","description":"","design":"## Context\n\nbd-70419816 revealed a critical gap: the export deduplication feature had unit tests but no integration tests simulating real-world git operations. This led to silent data loss in production.\n\n## Root Cause\n- Unit tests only tested functions in isolation\n- No integration tests for git operations (pull, reset, checkout) modifying JSONL\n- No tests validating export_hashes and JSONL stay in sync\n- Missing tests for stateful distributed system interactions (DB + JSONL + git)\n\n## Completed (bd-70419816)\n✓ TestJSONLIntegrityValidation - unit tests for validation logic\n✓ TestImportClearsExportHashes - tests import clears hashes\n✓ TestExportIntegrityAfterJSONLTruncation - simulates git reset (would have caught bd-70419816)\n✓ TestExportIntegrityAfterJSONLDeletion - tests recovery from file deletion\n✓ TestMultipleExportsStayConsistent - tests repeated exports\n\n## Still Needed (High Priority)\n1. Multi-repo sync test - two clones staying in sync after push/pull\n2. Auto-flush integration test - JSONL integrity preserved during auto-flush\n3. Daemon auto-sync integration test - complex state management\n4. Import after corruption test - recovery from partial data loss\n\n## Medium Priority\n- Partial export failure handling (disk full, network interruption)\n- Concurrent export/import race conditions\n- Large dataset performance tests (1000+ issues)\n- Export hash migration tests (version upgrades)\n\n## Testing Principles\n1. Test real-world scenarios: git ops, user errors, system failures, concurrent ops\n2. Integration tests for stateful systems (DB + files + git)\n3. Regression test for every bug fix\n4. Test invariants: JSONL count == DB count, hash consistency, etc.\n\n## Key Lesson\nStateful distributed systems need integration tests, not just unit tests.","acceptance_criteria":"- [ ] Multi-repo sync test implemented\n- [ ] Auto-flush integration test implemented  \n- [ ] Daemon auto-sync integration test implemented\n- [ ] Testing guidelines added to CONTRIBUTING.md\n- [ ] CI runs integration tests\n- [ ] All critical workflows have integration test coverage","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-10-29T21:53:15.397137-07:00","updated_at":"2025-11-08T01:58:15.281757-08:00","closed_at":"2025-11-08T00:36:59.02371-08:00","source_repo":"."}
 {"id":"bd-a101","content_hash":"805d60a6f4d9205a7e0498f63e9c0bd98a36eb86800304a123cd9122f694b5ab","title":"Support separate branch for beads commits","description":"Allow beads to commit to a separate branch (e.g., beads-metadata) using git worktrees to support protected main branch workflows.\n\nSolves GitHub Issue #205 - Users need to protect main branch while maintaining beads workflow.\n\nKey advantages:\n- Works on any git platform\n- Main branch stays protected  \n- No disruption to user's working directory\n- Backward compatible (opt-in via config)\n- Minimal disk overhead (sparse checkout)\n\nTotal estimate: 17-24 days (4-6 weeks with parallel work)","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-02T15:21:20.098247-08:00","updated_at":"2025-11-04T12:36:53.772727-08:00","closed_at":"2025-11-04T12:36:53.772727-08:00","external_ref":"GH-205","source_repo":"."}
 {"id":"bd-a1691807","content_hash":"52a3da17d0db9e7998b77b4962c00eeb866ca1eb3581d362863b68788b162582","title":"Integration test: mutation to export latency","description":"Measure time from bd create to JSONL update. Verify \u003c500ms latency. Test with multiple rapid mutations to verify batching.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-29T20:49:49.105247-07:00","updated_at":"2025-10-31T12:00:43.198883-07:00","closed_at":"2025-10-31T12:00:43.198883-07:00","source_repo":"."}
-{"id":"bd-a40f374f","content_hash":"a9385e9f00bc41e5e2258fdfccd9f2cbd5a702764b5f1d036274e6026f8c3e38","title":"bd validate - Comprehensive health check","description":"Run all validation checks in one command.\n\nChecks:\n- Duplicates\n- Orphaned dependencies\n- Test pollution\n- Git conflicts\n\nSupports --fix-all for auto-repair.\n\nDepends on bd-cbed9619.1, bd-0dcea000, bd-31aab707, bd-9826b69a.\n\nFiles: cmd/bd/validate.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T03:09:48.252246-08:00","updated_at":"2025-11-08T03:09:48.252246-08:00","closed_at":"2025-10-29T20:02:15.318966-07:00","source_repo":"."}
 {"id":"bd-a4b5","content_hash":"3966f6f9ab3202fe740f2936c7743f679ea42b75803c99465176ccf69ffd9dd7","title":"Implement git worktree management","description":"Create git worktree lifecycle management for separate beads branch.\n\nTasks:\n- Create internal/git/worktree.go\n- Implement CreateBeadsWorktree(branch, path)\n- Implement RemoveBeadsWorktree(path)\n- Implement CheckWorktreeHealth(path)\n- Configure sparse checkout (only .beads/)\n- Implement SyncJSONLToWorktree()\n- Handle worktree errors gracefully\n- Auto-cleanup on config change\n\nEstimated effort: 3-4 days","acceptance_criteria":"- Worktree created successfully on first use\n- Sparse checkout limits to .beads/ only\n- Health check detects and fixes broken worktrees\n- JSONL synced correctly before commits\n- Cleanup removes worktree completely","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.56423-08:00","updated_at":"2025-11-04T11:10:23.533053-08:00","closed_at":"2025-11-04T11:10:23.533055-08:00","source_repo":".","dependencies":[{"issue_id":"bd-a4b5","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.359843-08:00","created_by":"stevey"}]}
 {"id":"bd-a5251b1a","content_hash":"71a54f24d3d1c9eba8bf185c273ab6624815eb1299a8718aa0199c97f518008c","title":"Test RPC mutation event","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-29T19:08:03.315443-07:00","updated_at":"2025-10-31T12:00:43.177494-07:00","closed_at":"2025-10-31T12:00:43.177494-07:00","source_repo":"."}
+{"id":"bd-a557","content_hash":"35b394c75f08f60e3a8bf4cb5f837fd7644ae1bbc7a050d0f4b78d01c9e7a33e","title":"Issue 1 to reopen","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T02:53:09.974717-08:00","updated_at":"2025-11-08T02:53:09.974717-08:00","closed_at":"2025-11-07T21:57:59.910467-08:00","source_repo":"."}
 {"id":"bd-a9699011","content_hash":"5c0f39c01f3aa92d6407ef3128f4c8acb44b177f55f5d3906b5e83af5c0a3472","title":"GH#146: No color showing in terminal for some users","description":"User reports color not working in macOS (Taho 26.0.1) with iTerm 3.6.4 and Terminal.app, despite color working elsewhere in terminal. Python rich and printf escape codes work.\n\nNeed to investigate:\n- Is NO_COLOR env var set?\n- Terminal type detection?\n- fatih/color library configuration\n- Does bd list show colors? bd ready? bd init?\n- What's the output of: echo $TERM, echo $NO_COLOR","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-10-24T22:26:36.22163-07:00","updated_at":"2025-11-08T01:58:15.282138-08:00","closed_at":"2025-11-08T00:54:40.47956-08:00","external_ref":"github:146","source_repo":"."}
 {"id":"bd-ad5e","content_hash":"67fdba1ba5b838384b16b82ff45e200cb5fd4960795bb5ae29d6fdec549170ca","title":"Add AI planning docs management guidance to bd onboard (GH-196)","description":"Enhanced bd onboard command to provide guidance for managing AI-generated planning documents (Claude slop).\n\nAddresses GitHub issue #196: https://github.com/steveyegge/beads/issues/196\n\nChanges:\n- Added Managing AI-Generated Planning Documents section to bd onboard\n- Recommends using history/ directory for ephemeral planning files\n- Updated AGENTS.md to demonstrate the pattern\n- Added comprehensive tests\n\nCommit: d46177d","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-02T17:11:33.183636-08:00","updated_at":"2025-11-02T17:12:05.599633-08:00","closed_at":"2025-11-02T17:12:05.599633-08:00","source_repo":"."}
 {"id":"bd-aec5439f","content_hash":"1b42289a0cb1da0626a69c6f004bf62fc9ba6e3a0f8eb70159c5f1446497020b","title":"Update LINTING.md with current baseline","description":"After cleanup, document the remaining acceptable baseline in LINTING.md so we can track regression.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-27T18:53:10.38679-07:00","updated_at":"2025-11-06T20:06:49.218701-08:00","closed_at":"2025-11-06T19:41:08.661851-08:00","source_repo":"."}
 {"id":"bd-aewm","content_hash":"b9f0ebb0c99a35c39c918250a1220f74bfcd77905b85c66715b36d1df9c5ec4b","title":"bd-hv01: Missing cleanup of .merged temp file on failure","description":"Problem: deletion_tracking.go:49 creates tmpMerged file but does not clean up on failure, causing disk space leak and potential interference with subsequent syncs.\n\nFix: Add defer os.Remove(tmpMerged) after creating temp file path.\n\nFiles: cmd/bd/deletion_tracking.go:38-89","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-11-06T18:16:24.326719-08:00","updated_at":"2025-11-06T18:46:55.924379-08:00","closed_at":"2025-11-06T18:46:55.924379-08:00","source_repo":".","dependencies":[{"issue_id":"bd-aewm","depends_on_id":"bd-rbxi","type":"parent-child","created_at":"2025-11-06T18:19:15.061462-08:00","created_by":"daemon"}]}
 {"id":"bd-aysr","content_hash":"f8ff127568f471cc42391b1287cce69b376fb1b49bbef20a24d3394f57fba066","title":"Test numeric 1","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T12:58:41.498034-08:00","updated_at":"2025-11-05T12:58:44.73082-08:00","closed_at":"2025-11-05T12:58:44.73082-08:00","source_repo":"."}
+{"id":"bd-az0m","content_hash":"91dd58e84b57c84ae065004ef4c15d0b5330935a5fde35eed489a93452feb2e9","title":"Issue 1","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T02:53:09.975377-08:00","updated_at":"2025-11-08T02:53:09.975377-08:00","closed_at":"2025-11-07T21:55:09.42865-08:00","source_repo":".","dependencies":[{"issue_id":"bd-az0m","depends_on_id":"bd-bvo2","type":"related","created_at":"2025-11-07T19:07:21.069031-08:00","created_by":"daemon"}]}
 {"id":"bd-azqv","content_hash":"b4e68adcec7b19f567ebee47f505ca6b529c17b4c4b885282cfc564e8a874f9f","title":"Ready issue","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-07T19:04:22.247039-08:00","updated_at":"2025-11-07T22:07:17.344986-08:00","closed_at":"2025-11-07T21:55:09.429024-08:00","source_repo":"."}
 {"id":"bd-b121","content_hash":"5d71e793a6de110be977bf87cfd25c3b461f452a1e8e44633452de1f8343a098","title":"Fix :memory: database connection pool issue causing \"no such table\" errors","description":"Critical bug in v0.21.6 where :memory: databases with cache=shared create multiple connections in the pool, causing intermittent \"no such table\" errors. SQLite's shared cache for in-memory databases only works reliably with a single connection.\n\nRoot cause: Missing db.SetMaxOpenConns(1) after sql.Open() for :memory: databases.\n\nImpact: 37 test failures in VC project, affects all consumers using :memory: for testing.","acceptance_criteria":"- Add db.SetMaxOpenConns(1) for :memory: databases only\n- Verify VC test suite passes (37 previously failing tests)\n- Add a test in Beads that reproduces the issue\n- Document the pool limitation in code comments\n- Release as Beads v0.21.7","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-04T00:52:56.318619-08:00","updated_at":"2025-11-05T11:31:27.50439-08:00","closed_at":"2025-11-05T00:50:00.558124-08:00","source_repo":"."}
 {"id":"bd-b134","content_hash":"d291c43cce23793342ead99e03001af26af559f589be271dfb2723c9a077bb97","title":"Add tests for Integration Layer Implementation","description":"While implementing bd-wfmw, noticed missing tests","notes":"Reviewed existing coverage:\n- Basic test coverage exists in lib/test_beads_mail_adapter.py\n- Integration tests cover failure scenarios in tests/integration/test_mail_failures.py\n- Good coverage of: enabled/disabled modes, graceful degradation, 409 conflicts, HTTP errors, config\n- Missing: authorization headers detail, request body structure validation, concurrent reservation timing, TTL edge cases","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T00:20:30.804172-08:00","updated_at":"2025-11-08T02:17:04.046571-08:00","closed_at":"2025-11-08T02:17:04.046571-08:00","source_repo":".","dependencies":[{"issue_id":"bd-b134","depends_on_id":"bd-wfmw","type":"discovered-from","created_at":"2025-11-08T00:20:30.850776-08:00","created_by":"daemon"}]}
@@ -263,16 +266,19 @@
 {"id":"bd-b4b0","content_hash":"ab3833b7a2cd79e39cbf6e41e35da88c8c45581dff3862bad2b8476b37c3b494","title":"Implement fs bridge layer for WASM (Go syscall/js to Node.js fs)","description":"Go's os package in WASM returns 'not implemented on js' for mkdir and other file operations. Need to create a bridge layer that:\n\n1. Detects WASM environment (GOOS=js)\n2. Uses syscall/js to call Node.js fs module functions\n3. Implements wrappers for:\n   - os.MkdirAll\n   - os.ReadFile / os.WriteFile\n   - os.Open / os.Create\n   - os.Stat / os.Lstat\n   - filepath operations\n   \nApproach:\n- Create internal/wasm/fs_bridge.go with //go:build js \u0026\u0026 wasm\n- Export Node.js fs functions to Go using global.readFileSync, global.writeFileSync, etc.\n- Wrap in Go API that matches os package signatures\n- Update beads.go and storage layer to use bridge when in WASM\n\nThis unblocks bd-4462 (basic WASM testing) and [deleted:bd-5bbf] (feature parity testing).","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T22:22:42.796412-08:00","updated_at":"2025-11-03T22:16:38.855334-08:00","closed_at":"2025-11-02T22:47:49.586218-08:00","source_repo":".","dependencies":[{"issue_id":"bd-b4b0","depends_on_id":"bd-44d0","type":"parent-child","created_at":"2025-11-02T22:23:49.585675-08:00","created_by":"stevey"}]}
 {"id":"bd-b501fcc1","content_hash":"4cb17f88a8299c0a297b42946c4eaab91fb3f364ba8cd83fe2ee9ff11cb87822","title":"Unit tests for Debouncer","description":"Test debouncer batches multiple triggers into single action. Test timer reset on subsequent triggers. Test cancel during wait. Test thread safety.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-29T19:42:29.86146-07:00","updated_at":"2025-10-31T17:54:06.880513-07:00","closed_at":"2025-10-31T17:54:06.880513-07:00","source_repo":"."}
 {"id":"bd-b54c","content_hash":"1e4750bb1f7a113f3b9b1586927bf1552c60902c8e87243b4958a98e2e6fe43a","title":"Document Claude Code for Web SessionStart hook","description":"Create documentation for using bd in Claude Code for Web:\n\n## Documentation locations\n- README.md - Add Claude Code for Web section\n- Create docs/CLAUDE_CODE_WEB.md with detailed instructions\n\n## SessionStart hook example\n```json\n{\n  \"sessionStart\": {\n    \"script\": \"npm install -g @beads/bd \u0026\u0026 bd init --quiet --prefix bd || true\"\n  }\n}\n```\n\n## Documentation should cover\n- How to configure SessionStart hook in .claude/settings.json\n- Verification: Check bd is installed (bd --version)\n- Basic workflow in Claude Code for Web\n- Troubleshooting common issues\n- Note about network restrictions and why npm approach works\n\n## Examples\n- Creating issues in web sandbox\n- Syncing with git in web environment\n- Using MCP server (if applicable)","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T23:40:15.362379-08:00","updated_at":"2025-11-03T10:31:45.382915-08:00","closed_at":"2025-11-03T10:31:45.382915-08:00","source_repo":".","dependencies":[{"issue_id":"bd-b54c","depends_on_id":"bd-febc","type":"parent-child","created_at":"2025-11-02T23:40:32.991889-08:00","created_by":"daemon"}]}
+{"id":"bd-b55e2ac2","content_hash":"44122b61b1dcd06407ecf36f57577ea72c5df6dc8cc2a8c1b173b37d16a10267","title":"Fix autoimport tests for content-hash collision scoring","description":"## Overview\nThree autoimport tests are failing after bd-cbed9619.4 because they expect behavior based on the old reference-counting collision resolution, but the system now uses deterministic content-hash scoring.\n\n## Failing Tests\n1. `TestAutoImportMultipleCollisionsRemapped` - expects local versions preserved\n2. `TestAutoImportAllCollisionsRemapped` - expects local versions preserved  \n3. `TestAutoImportCollisionRemapMultipleFields` - expects specific collision resolution behavior\n\n## Root Cause\nThese tests were written when ScoreCollisions used reference counting to determine which version to keep. Now it uses content-hash comparison (introduced in commit 2e87329), which produces different but deterministic results.\n\n## Example\nOld behavior: Issue with more references would be kept\nNew behavior: Issue with lexicographically lower content hash is kept\n\n## Solution\nUpdate each test to:\n1. Verify the new content-hash based behavior is correct\n2. Check that the remapped issue (not necessarily local/remote) has the expected content\n3. Ensure dependencies are preserved on the correct remapped issue\n\n## Acceptance Criteria\n- All three autoimport tests pass\n- Tests verify content-hash determinism (same collision always resolves the same way)\n- Tests check dependency preservation on remapped issues\n- Test documentation explains content-hash scoring expectations\n\n## Files to Modify\n- `cmd/bd/autoimport_collision_test.go`\n\n## Testing\nRun: `go test ./cmd/bd -run \"TestAutoImport.*Collision\" -v`","status":"open","priority":2,"issue_type":"task","created_at":"2025-10-28T19:17:28.358028-07:00","updated_at":"2025-10-30T17:12:58.179059-07:00","source_repo":"."}
 {"id":"bd-b5a3","content_hash":"d58f635721d24b7761782f83df452a67f794080d2c41cb4f6fad2f27ef2cf0b6","title":"Extract Daemon struct and config into internal/daemonrunner","description":"Create internal/daemonrunner with Config struct and Daemon struct. Move daemon runtime logic from cmd/bd/daemon.go Run function into Daemon.Start/Stop methods.","notes":"Refactoring complete! Created internal/daemonrunner package with:\n- Config struct (config.go)\n- Daemon struct with Start/Stop methods (daemon.go)\n- RPC server lifecycle (rpc.go)\n- Sync loop implementation (sync.go)\n- Git operations (git.go)\n- Process management (process.go, flock_*.go)\n- Logger setup (logger.go)\n- Platform-specific signal handling (signals_*.go)\n- Database fingerprint validation (fingerprint.go)\n\nBuild succeeds and most daemon tests pass. Import functionality still delegated to cmd/bd (marked with TODO(bd-b5a3)).","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-01T11:41:14.843103-07:00","updated_at":"2025-11-01T20:23:46.475885-07:00","closed_at":"2025-11-01T20:23:46.475888-07:00","source_repo":"."}
 {"id":"bd-b6b2","content_hash":"6d2b2f1bbec6b9aa956e5e84c6b78da699a72a487d2317c6533215d574d2209f","title":"Feature with design","description":"This is a description","design":"Use MVC pattern","acceptance_criteria":"All tests pass","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-10-31T21:40:34.612465-07:00","updated_at":"2025-11-04T11:10:23.533636-08:00","closed_at":"2025-11-04T11:10:23.533638-08:00","source_repo":"."}
 {"id":"bd-b7d2","content_hash":"cd78e03d80898095a2f7f56c7f000b50e9e3be7b2416797d11f4640e5a0e583a","title":"Add sync.branch configuration","description":"Add configuration layer to support sync.branch setting via config file, environment variable, or CLI flag.\n\nTasks:\n- Add sync.branch field to config schema\n- Add BEADS_SYNC_BRANCH environment variable\n- Add --branch flag to bd init\n- Add bd config get/set sync.branch commands\n- Validation (branch name format, conflicts)\n- Config migration for existing users\n\nEstimated effort: 1-2 days","acceptance_criteria":"- Can set sync.branch via config file, env var, or CLI\n- bd config get sync.branch returns configured value\n- Invalid branch names rejected with clear error\n- Backward compatible (empty = current branch)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T15:22:35.560141-08:00","updated_at":"2025-11-04T11:10:23.533911-08:00","closed_at":"2025-11-04T11:10:23.533913-08:00","source_repo":".","dependencies":[{"issue_id":"bd-b7d2","depends_on_id":"bd-a101","type":"parent-child","created_at":"2025-11-02T15:22:48.356847-08:00","created_by":"stevey"}]}
 {"id":"bd-b92a","content_hash":"01d8b852f1d9936835a253f6b9576c401cbd143772302b25ac859db79b6be76a","title":"Wire config to import pipeline","description":"Connect import.orphan_handling config to importer.go and sqlite validation functions. Pass mode flag through call chain. Implement all four modes (strict/resurrect/skip/allow) with proper error messages and logging.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:08.612142-08:00","updated_at":"2025-11-05T00:44:27.949021-08:00","closed_at":"2025-11-05T00:44:27.949024-08:00","source_repo":"."}
 {"id":"bd-bb08","content_hash":"df5b8f359f459b9fc8a24e089878e65222f4b7ba541e829ebb1d34e5beb3a9fc","title":"Add ON DELETE CASCADE to child_counters schema","description":"Update schema.go child_counters table foreign key with ON DELETE CASCADE. When parent deleted, child counter should also be deleted. If parent is resurrected, counter gets recreated from scratch. Add migration for existing databases.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-04T12:32:30.681452-08:00","updated_at":"2025-11-05T11:31:27.505024-08:00","closed_at":"2025-11-05T00:55:12.427194-08:00","source_repo":"."}
 {"id":"bd-bc2c6191","content_hash":"46ab7e965823421a1cc06fdbb3a1faa8ef31f0c46487cd05a4cec8127af8e480","title":"Audit Current Cache Usage","description":"Understand exactly what code depends on the storage cache","acceptance_criteria":"- Document showing all cache dependencies\n- Confirmation that removing cache won't break MCP\n- List of tests that need updating\n\nFiles to examine:\n- internal/rpc/server_cache_storage.go (cache implementation)\n- internal/rpc/client.go (how req.Cwd is set)\n- internal/rpc/server_*.go (all getStorageForRequest calls)\n- integrations/beads-mcp/ (MCP multi-repo logic)\n\nTasks:\n- Document all callers of getStorageForRequest()\n- Verify req.Cwd is only set by RPC client for database discovery\n- Confirm MCP server doesn't rely on multi-repo cache behavior\n- Check if any tests assume multi-repo routing\n- Review environment variables: BEADS_DAEMON_MAX_CACHE_SIZE, BEADS_DAEMON_CACHE_TTL, BEADS_DAEMON_MEMORY_THRESHOLD_MB","notes":"Audit complete. See CACHE_AUDIT.md for full findings.\n\nSummary:\n- Cache was already removed in commit 322ab63 (2025-10-28)\n- server_cache_storage.go deleted (~286 lines)\n- All getStorageForRequest calls replaced with s.storage\n- All environment variables removed\n- MCP multi-repo works via per-project daemon architecture\n- All tests updated and passing\n- Only stale comment in server.go needed fixing","status":"closed","priority":1,"issue_type":"task","created_at":"2025-10-27T23:02:43.506373-07:00","updated_at":"2025-11-06T20:06:49.218998-08:00","closed_at":"2025-11-06T19:48:30.520616-08:00","source_repo":"."}
+{"id":"bd-bc7l","content_hash":"bc091a6fed46130e6cb791c4d58c777b904e22f92cc6921d231053abf48c3c4b","title":"Issue 2 to reopen","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T02:53:09.975911-08:00","updated_at":"2025-11-08T02:53:09.975911-08:00","closed_at":"2025-11-07T21:57:59.91095-08:00","source_repo":"."}
 {"id":"bd-bdaf24d5","content_hash":"64067e38421a77f1b54fca73e6b98923d15aca0933463a1fa6862270c3102566","title":"Final validation test","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-27T18:27:28.310533-07:00","updated_at":"2025-10-31T12:00:43.184995-07:00","closed_at":"2025-10-31T12:00:43.184995-07:00","source_repo":"."}
 {"id":"bd-be7a","content_hash":"d9043a7a49f8e42dc88c3c01aaa178c1560b67c1637c3373b39c387272e8b725","title":"Create npm package structure with package.json","description":"Set up initial npm package structure for @beads/bd:\n\n## Files to create\n- npm/package.json - Package metadata, dependencies, scripts\n- npm/bin/bd - CLI wrapper script that invokes native binary\n- npm/.gitignore - Ignore downloaded binaries\n- npm/README.md - Installation and usage instructions\n\n## package.json structure\n- Name: @beads/bd (scoped package)\n- Main: index.js (exports binary path)\n- Bin: bin/bd (CLI entry point)\n- Scripts: postinstall (download binary)\n- Keywords: issue-tracker, cli, beads, bd\n- License: MIT\n\n## Bin wrapper\nSimple Node.js script that:\n- Spawns native binary with child_process.spawn\n- Passes through all arguments and stdio\n- Exits with binary's exit code","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T23:39:47.416779-08:00","updated_at":"2025-11-03T10:31:45.381258-08:00","closed_at":"2025-11-03T10:31:45.381258-08:00","source_repo":".","dependencies":[{"issue_id":"bd-be7a","depends_on_id":"bd-febc","type":"parent-child","created_at":"2025-11-02T23:40:32.923859-08:00","created_by":"daemon"}]}
 {"id":"bd-bgca","content_hash":"eaf260976156d4aa03681369efec757f8119f9d5ec75703d54b0f1359e5acb25","title":"Latency test manual","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-08T00:04:25.028223-08:00","updated_at":"2025-11-08T00:06:46.169654-08:00","closed_at":"2025-11-08T00:06:46.169654-08:00","source_repo":"."}
 {"id":"bd-buol","content_hash":"020dc9dbbd7f3e2b40c35f01bf8a65cf32ab419c188081493ea4e541bad1442e","title":"Invert control for compact: provide tools for agent-driven compaction","description":"Currently compact requires Anthropic API key because bd calls the AI directly. This is backwards - we should provide tools (like all other bd commands) that let an AI agent perform the compaction. The agent decides what to keep/merge, not bd. Related to GH #243 complaint about API key requirement.","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-07T00:27:28.498069-08:00","updated_at":"2025-11-07T23:18:08.38606-08:00","closed_at":"2025-11-07T23:08:51.67473-08:00","source_repo":"."}
+{"id":"bd-bvo2","content_hash":"66fd2d53d97eb8dcb3231e82702ca7eb0f1887dc9b3ee2b2865e0d5158ca7311","title":"Issue 2","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T02:53:09.976484-08:00","updated_at":"2025-11-08T02:53:09.976484-08:00","closed_at":"2025-11-07T21:55:09.429328-08:00","source_repo":"."}
 {"id":"bd-by3x","content_hash":"80149be1ddf4ef26d5d56c444895be01ec8b59492c258c2365fa1c2619061bbd","title":"Windows binaries lack SQLite support (GH #253)","description":"Windows users installing via install.ps1 get \"sql: unknown driver sqlite\" error. Root cause: GoReleaser was building with CGO_ENABLED=0, which excludes SQLite driver.\n\nFixed by:\n1. Enabling CGO in .goreleaser.yml\n2. Installing MinGW cross-compiler in release workflow\n3. Splitting builds per platform to set correct CC for Windows\n\nNeeds new release to fix for users.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-07T15:54:13.134815-08:00","updated_at":"2025-11-07T15:55:07.024156-08:00","closed_at":"2025-11-07T15:55:07.024156-08:00","source_repo":"."}
 {"id":"bd-bzfy","content_hash":"90bbde4d90d68728a9377d5d966682dc836740f1be43a0cf80d3cc69002a560b","title":"Integrate beads-merge tool by @neongreen","description":"**Context**: @neongreen built a production-ready 3-way merge tool for JSONL files that works with both Git and Jujutsu. This is superior to our planned bd resolve-conflicts because it prevents conflicts proactively instead of resolving them after the fact.\n\n**Tool**: https://github.com/neongreen/mono/tree/main/beads-merge\n\n**What it does**:\n- 3-way merge of JSONL files (base, left, right)\n- Field-level merging (titles, status, priority, etc.)\n- Smart dependency merging (union + dedup)\n- Conflict markers for unresolvable conflicts\n- Exit code 1 for conflicts (standard)\n\n**Integration options**:\n\n1. **Recommend (minimal effort)** - Document in AGENTS.md + TROUBLESHOOTING.md\n2. **Bundle binary** - Include in releases (cross-platform builds)\n3. **Port to Go** - Reimplement in bd codebase\n4. **Auto-install hook** - During bd init, offer to install merge driver\n\n**Recommendation**: Start with option 1 (document), then option 2 (bundle) once proven.\n\n**Related**: bd-5f483051 (bd resolve-conflicts - can close as superseded)","notes":"Created GitHub issue to discuss integration approach with @neongreen: https://github.com/neongreen/mono/issues/240\n\nAwaiting their preference on:\n1. Vendor with attribution (fastest)\n2. Extract as importable module (best long-term)\n3. Keep as separate tool (current state)\n\nNext: Wait for response before proceeding with integration.\n\nUPDATE 2025-11-06: @neongreen gave permission to vendor! Quote: \"I switched from beads to my own thing (tk) so I'm very happy to give beads-merge away — feel free to move it into the beads repo and I will point mono's readme to beads\"\n\nNext: Vendor beads-merge with full attribution","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-05T11:31:44.906652-08:00","updated_at":"2025-11-06T18:19:16.233387-08:00","closed_at":"2025-11-06T15:38:37.052274-08:00","source_repo":"."}
 {"id":"bd-c01f","content_hash":"14269c39f13784e0ee793fae005b1869fea5c08af1bbdc4a2f841720278180d5","title":"Implement bd stale command to find abandoned/forgotten issues","description":"Add bd stale command to surface issues that haven't been updated recently and may need attention.\n\nUse cases:\n- In-progress issues with no recent activity (may be abandoned)\n- Open issues that have been forgotten\n- Issues that might be outdated or no longer relevant\n\nQuery logic should find non-closed issues where updated_at exceeds a time threshold.\n\nShould support:\n- --days N flag (default 30-90 days)\n- --status filter (e.g., only in_progress)\n- --json output for automation\n\nReferences GitHub issue #184 where user expected this command to exist.","design":"Implementation approach:\n1. Add new command in cmd/bd/stale.go\n2. Query issues with: status != 'closed' AND updated_at \u003c (now - N days)\n3. Support filtering by status (open, in_progress, blocked)\n4. Default threshold: 30 days (configurable via --days)\n5. JSON output for agent consumption\n6. Order by updated_at ASC (oldest first)","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-10-31T22:48:46.85435-07:00","updated_at":"2025-10-31T22:54:33.704492-07:00","closed_at":"2025-10-31T22:54:33.704492-07:00","source_repo":"."}
@@ -325,6 +331,7 @@
 {"id":"bd-dxdn","content_hash":"5897df0b25f78b5f061302cde79a16aaf71b317eb8f931f461b187de5ff0c2f4","title":"bd ready taking 5 seconds with 132 issues (89 closed)","description":"User reports bd ready is annoyingly slow on M2 Mac - 5 seconds for 132 issues (89 closed). Started noticing after hash-based IDs update. Need to investigate performance regression. Reported in GH #243.","notes":"Initial analysis:\n- bd ready runs in 40ms on my machine with similar DB size\n- Recursive CTE looks properly indexed with idx_dependencies_depends_on_type\n- Need EXPLAIN QUERY PLAN from user's machine to diagnose\n- Possible missing index: (issue_id, type) for reverse lookup in recursive join\n- Could also be SQLite version difference or WAL mode not enabled\n\nNeed user to run:\n1. bd --version (check SQLite version)\n2. EXPLAIN QUERY PLAN on the ready query\n3. Confirm daemon vs direct mode\n4. Check if WAL mode is enabled","status":"in_progress","priority":1,"issue_type":"bug","created_at":"2025-11-07T00:26:30.359512-08:00","updated_at":"2025-11-07T00:29:24.711948-08:00","source_repo":"."}
 {"id":"bd-e044","content_hash":"8393c18d7f6edfed3d3e360a32a3075a9e0d9caa6f02d704774482aa1d9b0a7f","title":"Add mermaid output format for bd dep tree","description":"Add visual dependency graph output using Mermaid format for better visualization of issue relationships.\n\nExample usage:\n  bd dep tree --format mermaid \u003cissue-id\u003e\n  bd dep tree --format mermaid bd-42 \u003e graph.md\n\nThis would output Mermaid syntax that can be rendered in GitHub, documentation sites, or Mermaid live editor.\n\nImplementation notes:\n- Add --format flag to dep tree command\n- Support 'text' (default) and 'mermaid' formats\n- Mermaid graph should show issue IDs, titles, and dependency types\n- Consider using flowchart LR or graph TD syntax","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-03T18:10:18.978383-08:00","updated_at":"2025-11-03T20:55:06.696363-08:00","closed_at":"2025-11-03T20:55:06.69637-08:00","source_repo":"."}
 {"id":"bd-e05d","content_hash":"c2f4d60f5bd679d9bf609c35efc9c15e8dd52130fb9b68eacfe47bdda910ecd7","title":"Investigate and optimize test suite performance","description":"Test suite is taking very long to run (\u003e45s for cmd/bd tests, full suite timing unknown but was cancelled).\n\nThis impacts development velocity and CI/CD performance.\n\nInvestigation needed:\n- Profile which tests are slowest\n- Identify bottlenecks (disk I/O, network, excessive setup/teardown?)\n- Consider parallelization opportunities\n- Look for redundant test cases\n- Check if integration tests can be optimized","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-02T15:37:44.529955-08:00","updated_at":"2025-11-02T16:35:38.093133-08:00","closed_at":"2025-11-02T16:35:38.093137-08:00","source_repo":"."}
+{"id":"bd-e1085716","content_hash":"a9385e9f00bc41e5e2258fdfccd9f2cbd5a702764b5f1d036274e6026f8c3e38","title":"bd validate - Comprehensive health check","description":"Run all validation checks in one command.\n\nChecks:\n- Duplicates\n- Orphaned dependencies\n- Test pollution\n- Git conflicts\n\nSupports --fix-all for auto-repair.\n\nDepends on bd-cbed9619.1, bd-0dcea000, bd-31aab707, bd-9826b69a.\n\nFiles: cmd/bd/validate.go (new)","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T03:12:04.153582-08:00","updated_at":"2025-11-08T03:12:04.153582-08:00","closed_at":"2025-11-06T19:27:11.734483-08:00","source_repo":"."}
 {"id":"bd-e166","content_hash":"000f4f9d069ffedceae13894d967ec30fa4a89e318bfcac4847f3c3b16d44a89","title":"Improve timestamp comparison readability in import","description":"The timestamp comparison logic uses double-negative which can be confusing:\n\nCurrent code:\nif !incoming.UpdatedAt.After(existing.UpdatedAt) {\n    // skip update\n}\n\nMore readable:\nif incoming.UpdatedAt.After(existing.UpdatedAt) {\n    // perform update\n} else {\n    // skip (local is newer)\n}\n\nThis is a minor refactor for code clarity.\n\nRelated: bd-1022\nFiles: internal/importer/importer.go:411, 488","status":"open","priority":4,"issue_type":"chore","created_at":"2025-11-02T15:32:12.27108-08:00","updated_at":"2025-11-02T15:32:12.27108-08:00","source_repo":"."}
 {"id":"bd-e16b","content_hash":"969a580f09de305f494c160c21ad58b43e348320023eb990ecb8cf5395cccb6e","title":"Replace BEADS_DB with BEADS_DIR environment variable","description":"Implement BEADS_DIR as a replacement for BEADS_DB to point to the .beads directory instead of the database file directly.\n\nRationale:\n- With --no-db mode, there's no .db file to point to\n- The .beads directory is the logical unit (contains config.yaml, db files, jsonl files)\n- More intuitive: point to the beads directory not the database file\n\nImplementation:\n1. Add BEADS_DIR environment variable support\n2. Maintain backward compatibility with BEADS_DB\n3. Priority order: BEADS_DIR \u003e BEADS_DB \u003e auto-discovery\n4. If BEADS_DIR is set, look for config.yaml in that directory to find actual database path\n5. Update documentation and migration guide\n\nFiles to modify:\n- beads.go (FindDatabasePath function)\n- cmd/bd/main.go (initialization)\n- Documentation (CLI_REFERENCE.md, TROUBLESHOOTING.md, etc.)\n- MCP integration (integrations/beads-mcp/src/beads_mcp/config.py)\n\nTesting:\n- Ensure BEADS_DB still works (backward compatibility)\n- Test BEADS_DIR with both db and --no-db modes\n- Test priority order when both are set\n- Update integration tests\n\nRelated to GitHub issue #179","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-02T18:19:26.131948-08:00","updated_at":"2025-11-02T18:27:14.545162-08:00","closed_at":"2025-11-02T18:27:14.545162-08:00","source_repo":"."}
 {"id":"bd-e1d645e8","content_hash":"2f5bc6f9e3cd91a8b5c9d8de92fa5342eb3d9d7a12371d316e54599348b504e4","title":"Rapid 4","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-10-29T19:11:57.484329-07:00","updated_at":"2025-11-07T23:21:44.925546-08:00","closed_at":"2025-11-07T23:18:52.316948-08:00","source_repo":"."}
@@ -342,6 +349,7 @@
 {"id":"bd-eiz9","content_hash":"0f1722abb1f24d08d2c643d9cd4109935325eb3ea994166ff88202d0a457b003","title":"Help agents understand version changes with bd info --whats-new","description":"**Problem** (from GH Discussion #239 by @maphew):\nWeekly major versions mean agents need to adapt workflows, but currently there's no efficient way to communicate \"what changed that affects you.\"\n\n**Proposed solutions:**\n\n1. **bd info --whats-new** - Show agent-actionable changes since last version\n   ```\n   Since v0.20.1:\n   • Hash IDs eliminate collisions - remove ID coordination workarounds\n   • Event-driven daemon (opt-in) - add BEADS_DAEMON_MODE=events\n   • Merge driver auto-configured - conflicts rarer\n   ```\n\n2. **Version-aware bd onboard** - Detect version changes and show diff of agent-relevant changes\n\n3. **AGENTS.md top section** - \"🆕 Recent Changes (Last 3 Versions)\" with workflow impacts\n\n**Why agents need this:**\n- Raw CHANGELOG is token-heavy and buried in release details\n- Full bd onboard re-run wasteful if only 2-3 things changed\n- Currently requires user to manually explain updates\n\n**Related:** https://github.com/steveyegge/beads/discussions/239","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-06T21:03:30.057576-08:00","updated_at":"2025-11-08T02:42:56.733731-08:00","closed_at":"2025-11-08T02:25:55.509249-08:00","source_repo":"."}
 {"id":"bd-epvx","content_hash":"37513b74fb23b40be54c502167c12fe287025afd38f2c040061bdb678bac4006","title":"Create Go adapter library (optional)","description":"For agents written in Go, provide native adapter library instead of shelling out to curl.\n\nAcceptance Criteria:\n- agentmail.Client struct\n- HTTP client with timeout/retry logic\n- Same API as Python adapter\n- Example usage in examples/go-agent/\n- Unit tests\n\nFile: pkg/agentmail/client.go\n\nNote: Lower priority - can shell out to curl initially","status":"open","priority":3,"issue_type":"feature","created_at":"2025-11-07T22:42:28.781577-08:00","updated_at":"2025-11-07T22:42:28.781577-08:00","source_repo":".","dependencies":[{"issue_id":"bd-epvx","depends_on_id":"bd-m9th","type":"blocks","created_at":"2025-11-07T23:04:01.47471-08:00","created_by":"daemon"}]}
 {"id":"bd-eqjc","content_hash":"8acc3d91ca9f9bef36d19358cb7f24eac247583a0e6701036aaff92607474c21","title":"bd init creates nested .beads directories","description":"bd init sometimes creates .beads/.beads/ nested directories, which should never happen. This occurs fairly often and can cause confusion about which .beads directory is active. Need to add validation to detect if already inside a .beads directory and either error or use the parent .beads location.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-06T22:21:22.948727-08:00","updated_at":"2025-11-06T22:22:41.04958-08:00","closed_at":"2025-11-06T22:22:41.04958-08:00","source_repo":"."}
+{"id":"bd-es19","content_hash":"5c5951971ed466f30fa12e1d7f73457ecc430464726516f069e6659f762687e6","title":"BG's issue to reopen","description":"","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-08T02:53:09.977366-08:00","updated_at":"2025-11-08T02:53:09.977366-08:00","closed_at":"2025-11-07T21:57:59.90981-08:00","source_repo":"."}
 {"id":"bd-expt","content_hash":"6e14db64fb24882e4cf544ec24eaa994aba970fd0ae31c72dda2d8ea88560753","title":"RPC fast-fail: stat socket before dial, cap timeouts to 200ms","description":"Eliminate 5s delay when daemon socket is missing by:\n1. Add os.Stat(socketPath) check before dialing in TryConnect\n2. Return (nil, nil) immediately if socket doesn't exist\n3. Set default dial timeout to 200ms in TryConnect\n4. Keep TryConnectWithTimeout for explicit health/status checks (1-2s)\n\nThis prevents clients from waiting through full timeout when no daemon is running.","status":"closed","priority":0,"issue_type":"task","created_at":"2025-11-07T16:42:12.688526-08:00","updated_at":"2025-11-07T22:07:17.345918-08:00","closed_at":"2025-11-07T21:04:21.671436-08:00","source_repo":".","dependencies":[{"issue_id":"bd-expt","depends_on_id":"bd-ndyz","type":"discovered-from","created_at":"2025-11-07T16:42:12.689284-08:00","created_by":"daemon"}]}
 {"id":"bd-f0d9bcf2","content_hash":"00e0c7b440024e6257d1bac9c1d5af10f8a12ee1726478e4b5bab06e34bfb586","title":"Batch test 1","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-10-29T15:29:01.795728-07:00","updated_at":"2025-10-31T12:00:43.184078-07:00","closed_at":"2025-10-31T12:00:43.184078-07:00","source_repo":"."}
 {"id":"bd-f282","content_hash":"90043e5e39cbb062ce0ff6a323ce2d0a16465783742d06ac9da1df66d837e025","title":"Test npm package installation locally","description":"Verify npm package works before publishing:\n\n## Local testing\n- Run npm pack in npm/ directory\n- Install tarball globally: npm install -g beads-bd-0.21.5.tgz\n- Test basic commands:\n  - bd --version\n  - bd init --quiet --prefix test\n  - bd create \"Test issue\" -p 1 --json\n  - bd list --json\n  - bd sync\n\n## Test environments\n- macOS (darwin-arm64 and darwin-amd64)\n- Linux (ubuntu docker container for linux-amd64)\n- Windows (optional, if available)\n\n## Validation\n- Binary downloads during postinstall\n- All bd commands work identically to native\n- No permission issues\n- Proper error messages on failure","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-02T23:40:05.71835-08:00","updated_at":"2025-11-03T10:31:45.382577-08:00","closed_at":"2025-11-03T10:31:45.382577-08:00","source_repo":".","dependencies":[{"issue_id":"bd-f282","depends_on_id":"bd-febc","type":"parent-child","created_at":"2025-11-02T23:40:32.968748-08:00","created_by":"daemon"}]}
@@ -404,6 +412,7 @@
 {"id":"bd-ktng","content_hash":"0a09f3e1549a70817f23aa57444811aaf18683ff9336944ff6e8c277ac5684b4","title":"Optimize CLI test suite - eliminate redundant git init calls","description":"Current: Each of 13 CLI tests calls git init (31s total). Solution: Use single test binary built once in init(), skip git operations where possible, or use mock filesystem.","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-04T11:23:13.660276-08:00","updated_at":"2025-11-04T11:23:13.660276-08:00","source_repo":".","dependencies":[{"issue_id":"bd-ktng","depends_on_id":"bd-l5gq","type":"discovered-from","created_at":"2025-11-04T11:23:13.662102-08:00","created_by":"daemon"}]}
 {"id":"bd-l4b6","content_hash":"62f76d6f751783139b97ee4b08e1134f6154d0eb5696e0f78ce258f841c9738e","title":"Add tests for bd init --team wizard","description":"Write integration tests for the team wizard:\n- Test branch detection\n- Test sync branch creation\n- Test protected branch workflow\n- Test auto-sync configuration","status":"closed","priority":2,"issue_type":"task","created_at":"2025-11-05T18:58:18.192425-08:00","updated_at":"2025-11-06T20:06:49.22056-08:00","closed_at":"2025-11-06T19:55:39.687439-08:00","source_repo":"."}
 {"id":"bd-l5gq","content_hash":"b485239aea61b3265f1be077398e6cade0e35cb6049f5ba829adf4c3dab43f77","title":"Optimize test suite performance - cut runtime by 50%+","description":"## Problem\nTest suite takes ~20.8 seconds, with 95% of time spent in just 2 tests:\n- TestHashIDs_MultiCloneConverge: 11.08s (53%)\n- TestHashIDs_IdenticalContentDedup: 8.78s (42%)\n\nBoth tests in beads_hash_multiclone_test.go perform extensive Git operations (bare repos, multiple clones, sync rounds).\n\n## Goal\nCut total test time by at least 50% (to ~10 seconds or less).\n\n## Analysis\nTests already have some optimizations:\n- --shared --depth=1 --no-tags for fast cloning\n- Disabled hooks, gc, fsync\n- Support -short flag\n\n## Impact\n- Faster development feedback loop\n- Reduced CI costs and time\n- Better developer experience","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-11-04T01:23:14.410648-08:00","updated_at":"2025-11-04T11:23:13.683213-08:00","closed_at":"2025-11-04T11:23:13.683213-08:00","source_repo":"."}
+{"id":"bd-la9d","content_hash":"298e5922cb0e6460d1cf14d2b7230c63403e72fcb511fb31d3fe2e2f241fd18a","title":"Blocking issue","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-08T02:53:09.97793-08:00","updated_at":"2025-11-08T02:53:09.97793-08:00","closed_at":"2025-11-07T21:55:09.43148-08:00","source_repo":"."}
 {"id":"bd-lwnt","content_hash":"ddfa247870eb3734ffa7a4d0da6fcd4a359d2b48e02d70aad8560ec4bc13afdc","title":"Test P1 priority","description":"","status":"closed","priority":1,"issue_type":"task","created_at":"2025-11-05T12:58:38.074112-08:00","updated_at":"2025-11-05T12:58:44.711763-08:00","closed_at":"2025-11-05T12:58:44.711763-08:00","source_repo":"."}
 {"id":"bd-m9th","content_hash":"eabc13aaa418ea35d1c9cf709cf5d7cc7df19c7afba31ade680d29056bb9699a","title":"Create Python adapter library","description":"Create beads_mail_adapter.py library that wraps Agent Mail HTTP calls with health checks and graceful degradation.\n\nAcceptance Criteria:\n- AgentMailAdapter class with health check on init\n- enabled flag auto-disables if server unreachable\n- All methods wrapped in try/catch (non-blocking failures)\n- Methods: reserve_issue(), release_issue(), notify(), check_inbox()\n- Environment-based configuration (AGENT_MAIL_URL, AGENT_MAIL_TOKEN)\n- Unit tests for enabled/disabled modes\n\nFile: lib/beads_mail_adapter.py","status":"closed","priority":1,"issue_type":"feature","created_at":"2025-11-07T22:42:28.60152-08:00","updated_at":"2025-11-08T00:11:02.746747-08:00","closed_at":"2025-11-08T00:11:02.746747-08:00","source_repo":".","dependencies":[{"issue_id":"bd-m9th","depends_on_id":"bd-4cyb","type":"blocks","created_at":"2025-11-07T22:42:28.602698-08:00","created_by":"daemon"}]}
 {"id":"bd-mf0o","content_hash":"1d19c10fec609126f526ad052ef913f808c7f10983bcd03d661584f87e055ff1","title":"Add 'new' as alias for 'create' command","description":"","status":"closed","priority":2,"issue_type":"feature","created_at":"2025-11-08T03:11:46.791657-08:00","updated_at":"2025-11-08T03:11:51.035418-08:00","closed_at":"2025-11-08T03:11:51.035418-08:00","source_repo":"."}
@@ -433,12 +442,12 @@
 {"id":"bd-r1pf","content_hash":"aa28faaa7538a6f1691a5dbc3f5136c2f446c7a16836ee0b572d8fe3e86adcff","title":"Test label","description":"","status":"closed","priority":3,"issue_type":"task","created_at":"2025-11-06T20:16:20.609492-08:00","updated_at":"2025-11-06T20:16:34.973855-08:00","closed_at":"2025-11-06T20:16:34.973855-08:00","source_repo":".","labels":["","  urgent  "," bug  "," critical "]}
 {"id":"bd-r79z","content_hash":"2972e60ecf73426a5349415689e57a2404800ee61468ed6d295ab7d4b2c5c7e0","title":"GH#245: Windows MCP subprocess timeout for git rev-parse","description":"User reports git detection timing out on Windows in MCP server, but CLI works fine.\n\nPath: C:\\Users\\chris\\Documents\\DEV_R\\quarto-cli\nError: Git repository detection timed out after 5s\nWorks fine in CLI: `git rev-parse --show-toplevel` succeeds\n\nHypothesis: subprocess.run() with asyncio.to_thread() may have Windows-specific issues or the MCP runtime environment may not have proper PATH/git access.\n\nPotential fixes:\n1. Add subprocess shell=True on Windows\n2. Increase timeout further for Windows\n3. Add better error logging to capture subprocess stderr\n4. Skip git resolution entirely on timeout and just use provided path","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-07T16:31:37.531223-08:00","updated_at":"2025-11-07T19:00:44.358543-08:00","closed_at":"2025-11-07T19:00:44.358543-08:00","source_repo":"."}
 {"id":"bd-rb75","content_hash":"e91418eb7abda986ddb57feaee1b91867043de8c0883d71c21dc1bf4047f5824","title":"Clean up merge conflict artifacts in .beads directory","description":"After resolving merge conflicts in .beads/beads.jsonl, leftover artifacts remain as untracked files:\n- .beads/beads.base.jsonl\n- .beads/beads.left.jsonl\n\nThese appear to be temporary files created during merge conflict resolution.\n\nOptions to fix:\n1. Add these patterns to .beads/.gitignore automatically\n2. Clean up these files after successful merge resolution\n3. Document that users should delete them manually\n4. Add a check in 'bd sync' or 'bd doctor' to detect and remove stale merge artifacts\n\nPreferred solution: Add *.base.jsonl and *.left.jsonl patterns to .beads/.gitignore during 'bd init', and optionally clean them up automatically after successful import.","status":"closed","priority":2,"issue_type":"bug","created_at":"2025-11-06T19:09:16.114274-08:00","updated_at":"2025-11-06T19:13:44.630402-08:00","closed_at":"2025-11-06T19:13:44.630402-08:00","source_repo":"."}
-{"id":"bd-rbxi","content_hash":"c7e9f5293d411fb741c053d548479c5c387081f859e44e57ed21f855f91cfb26","title":"bd-hv01: Deletion tracking production readiness","description":"Epic to track all improvements and fixes needed to make the deletion tracking implementation (bd-hv01) production-ready.\n\nThe core 3-way merge algorithm is sound, but there are critical issues around atomicity, error handling, and edge cases that need to be addressed before this can be safely used in production.\n\nCritical path (P1):\n- Non-atomic snapshot operations\n- Brittle JSON string comparison\n- Silent partial deletion failures\n- Race conditions in concurrent scenarios\n\nFollow-up work (P2-P3):\n- Test coverage for edge cases and multi-repo mode\n- Performance optimizations\n- Code refactoring and observability\n\nRelated commit: 708a81c","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-06T18:18:24.315646-08:00","updated_at":"2025-11-08T02:24:24.686475-08:00","closed_at":"2025-11-08T02:19:19.780741-08:00","source_repo":"."}
+{"id":"bd-rbxi","content_hash":"df423e4150f6f3b5a19467b8cb41a4b90475cc9ced45ed577ebbe9e3e75279f9","title":"bd-hv01: Deletion tracking production readiness","description":"Epic to track all improvements and fixes needed to make the deletion tracking implementation ([deleted:bd-hv01]) production-ready.\n\nThe core 3-way merge algorithm is sound, but there are critical issues around atomicity, error handling, and edge cases that need to be addressed before this can be safely used in production.\n\nCritical path (P1):\n- Non-atomic snapshot operations\n- Brittle JSON string comparison\n- Silent partial deletion failures\n- Race conditions in concurrent scenarios\n\nFollow-up work (P2-P3):\n- Test coverage for edge cases and multi-repo mode\n- Performance optimizations\n- Code refactoring and observability\n\nRelated commit: 708a81c","status":"closed","priority":1,"issue_type":"epic","created_at":"2025-11-06T18:18:24.315646-08:00","updated_at":"2025-11-08T03:12:04.15385-08:00","closed_at":"2025-11-08T02:19:19.780741-08:00","source_repo":"."}
 {"id":"bd-ry1u","content_hash":"b566c54bd06360dbc38709cfb93040c8da04abf0309269bd8b4ee3710a9a4099","title":"Publish official devcontainer configuration","description":"","design":"Problem: GH issue #229 shows git hooks aren't available in devcontainers because bd CLI isn't installed. Solution: Provide official .devcontainer/devcontainer.json that installs Go, builds bd from source, runs bd init --quiet, and installs hooks automatically. Benefits: New contributors start immediately, AI assistants work out-of-box, no manual setup. Implementation: Create .devcontainer/devcontainer.json with Go feature, postCreateCommand to build bd and install hooks, environment variables. Acceptance: Container builds with bd installed, hooks functional, documentation updated, tested with Codespaces and VSCode.","notes":"Devcontainer configuration implemented. Manual testing required in actual devcontainer environment (Codespaces or VSCode Remote Containers). All code changes complete, tests pass, linting clean.","status":"closed","priority":2,"issue_type":"epic","created_at":"2025-11-05T15:02:21.783666-08:00","updated_at":"2025-11-05T17:46:42.70998-08:00","closed_at":"2025-11-05T17:46:42.70998-08:00","source_repo":"."}
 {"id":"bd-s02","content_hash":"911d456e4dabae028dd615b643c99058ef12e55ea523cb81cc933783c7b13546","title":"Manual task","description":"","status":"open","priority":2,"issue_type":"task","created_at":"2025-11-03T20:15:10.022202-08:00","updated_at":"2025-11-03T20:15:10.022202-08:00","source_repo":"."}
 {"id":"bd-sc57","content_hash":"c82176a5a4e821ce882030bbe3be411c528bc0fe659e1879c0be72758b55fb03","title":"Production Readiness (Optional)","description":"Enable multi-machine deployments with containerization and monitoring.","status":"closed","priority":3,"issue_type":"epic","created_at":"2025-11-07T22:43:31.527617-08:00","updated_at":"2025-11-08T01:06:12.904671-08:00","closed_at":"2025-11-08T01:06:12.904671-08:00","source_repo":".","dependencies":[{"issue_id":"bd-sc57","depends_on_id":"bd-wfmw","type":"blocks","created_at":"2025-11-07T22:43:31.528743-08:00","created_by":"daemon"},{"issue_id":"bd-sc57","depends_on_id":"bd-pdjb","type":"blocks","created_at":"2025-11-07T22:43:31.529193-08:00","created_by":"daemon"}]}
 {"id":"bd-sjmr","content_hash":"55d8ded3fe8f5cb6bd2096aad15c70e5e88230bf0bb2ea1a71347376eb2f123d","title":"Fix inconsistent error handling in multi-repo deletion tracking","description":"From bd-xo6b code review: Multi-repo deletion tracking has mixed failure modes that can leave system in inconsistent state.\n\n**Current behavior (daemon_sync.go):**\n- Snapshot capture (L505-514): Hard fail → aborts sync\n- Merge/prune (L575-584): Hard fail → aborts sync  \n- Base snapshot update (L613-619): Soft fail → logs warning, continues\n\n**Critical problem:**\nIf merge fails on repo 3 of 5:\n- Repos 1-2 have already merged and deleted issues (irreversible)\n- Repos 3-5 are untouched\n- Database is in partially-updated state\n- No rollback mechanism\n\n**Real-world scenario:**\n```\nSync with repos [A, B, C]:\n1. Capture snapshots A ✓, B ✓, C ✗ → ABORT (good)\n2. Merge A ✓, B ✗ → ABORT but A already deleted issues (BAD - no rollback)\n3. Update base A ⚠, B ⚠ → Warnings only (inconsistent with 1 \u0026 2)\n```\n\n**Solution options:**\n1. **Two-phase commit:**\n   - Phase 1: Validate all repos (check files exist, readable, parseable)\n   - Phase 2: Apply changes atomically (or fail entirely before any mutations)\n\n2. **Fail-fast validation:**\n   - Before any snapshot/merge operations, validate all repos upfront\n   - Abort entire sync if any repo fails validation\n\n3. **Make base snapshot update consistent:**\n   - Either make it hard-fail like the others, or make all soft-fail\n\n**Files:**\n- cmd/bd/daemon_sync.go:505-514 (snapshot capture)\n- cmd/bd/daemon_sync.go:575-584 (merge/prune)\n- cmd/bd/daemon_sync.go:613-619 (base snapshot update)\n\n**Recommendation:** Use option 1 (two-phase) or option 2 (fail-fast validation) + fix base snapshot inconsistency.","status":"closed","priority":1,"issue_type":"bug","created_at":"2025-11-06T19:31:29.538092-08:00","updated_at":"2025-11-06T19:35:41.268584-08:00","closed_at":"2025-11-06T19:35:41.268584-08:00","source_repo":".","dependencies":[{"issue_id":"bd-sjmr","depends_on_id":"bd-xo6b","type":"discovered-from","created_at":"2025-11-06T19:32:12.310033-08:00","created_by":"daemon"}]}
-{"id":"bd-spmx","content_hash":"81466635bb0e06c3db51d5dd5e2fd9d804541521298acf8d87612b03ff8fc480","title":"Investigation \u0026 Proof of Concept","description":"Validate that MCP Agent Mail works as expected and delivers promised benefits before committing to full integration.","notes":"POC completed successfully:\n✅ bd-muls: Server installed and tested\n✅ bd-27xm: MCP tool execution issues resolved\n✅ bd-6hji: File reservation collision prevention validated\n✅ bd-htfk: Latency benchmarking shows 20-50x improvement\n✅ bd-pmuu: ADR 002 created documenting integration decision\n\nResults validate Agent Mail benefits:\n- Collision prevention works (exclusive file reservations)\n- Latency: \u003c100ms (vs 2000-5000ms git sync)\n- Lightweight deployment (\u003c50MB memory)\n- Optional/non-intrusive integration approach validated\n\nNext: bd-wfmw (Integration Layer Implementation)","status":"closed","priority":0,"issue_type":"epic","created_at":"2025-11-07T22:41:37.13757-08:00","updated_at":"2025-11-08T00:06:20.731732-08:00","closed_at":"2025-11-08T00:06:20.731732-08:00","source_repo":"."}
+{"id":"bd-spmx","content_hash":"782a21bc7da73f2b62e340ff669b03731fcac21d75bd1bfdd222c04a565ff6ee","title":"Investigation \u0026 Proof of Concept","description":"Validate that MCP Agent Mail works as expected and delivers promised benefits before committing to full integration.","notes":"POC completed successfully:\n✅ bd-muls: Server installed and tested\n✅ bd-27xm: MCP tool execution issues resolved\n✅ [deleted:bd-6hji]: File reservation collision prevention validated\n✅ bd-htfk: Latency benchmarking shows 20-50x improvement\n✅ bd-pmuu: ADR 002 created documenting integration decision\n\nResults validate Agent Mail benefits:\n- Collision prevention works (exclusive file reservations)\n- Latency: \u003c100ms (vs 2000-5000ms git sync)\n- Lightweight deployment (\u003c50MB memory)\n- Optional/non-intrusive integration approach validated\n\nNext: bd-wfmw (Integration Layer Implementation)","status":"closed","priority":0,"issue_type":"epic","created_at":"2025-11-07T22:41:37.13757-08:00","updated_at":"2025-11-08T03:12:04.154114-08:00","closed_at":"2025-11-08T00:06:20.731732-08:00","source_repo":"."}
 {"id":"bd-srwk","content_hash":"77494cfb4c2b8f2746367239f800f0e36c93959a47385c7dc2a9d4ac54f4256d","title":"bd export should detect and prevent stale database exports","description":"## Problem\n\nWhen `bd export` is run with a stale database (older than issues.jsonl), it silently overwrites the JSONL file with stale data, causing data loss.\n\n## What Happened (vc project)\n\n1. Agent A created 4 new issues and exported to issues.jsonl (commit 99a9d58)\n2. Agent A closed an issue and exported again (commit 58b4613) - JSONL now has 4 epics\n3. Agent B had stale database (from before step 1)\n4. Agent B worked on unrelated issue and exported (commit 0609233)\n5. Agent B's export **overwrote issues.jsonl**, removing the 4 epics created by Agent A\n6. Required manual recovery by re-exporting from Agent A's correct database\n\n## Expected Behavior\n\n`bd export` should detect that the database is stale and either:\n- **Refuse to export** with error message explaining the issue\n- **Warn prominently** and require explicit --force flag to override\n- **Auto-import first** to sync database before exporting\n\n## How to Detect Staleness\n\nCompare modification times (similar to VC's ValidateDatabaseFreshness):\n1. Check .db, .db-wal, .db-shm timestamps (use newest for WAL mode)\n2. Check issues.jsonl timestamp\n3. If JSONL is newer by \u003e1 second: database is stale\n\n## Suggested Fix\n\nAdd staleness check in `bd export`:\n\n```go\nfunc Export(dbPath, jsonlPath string, force bool) error {\n    // Check if database is stale\n    if !force {\n        if err := checkDatabaseFreshness(dbPath, jsonlPath); err != nil {\n            return fmt.Errorf(\"database is stale: %w\\n\" +\n                \"Run 'bd import %s' first to sync, or use --force to override\",\n                err, jsonlPath)\n        }\n    }\n    \n    // Proceed with export...\n}\n```\n\n## Impact\n\n- **Severity**: High (silent data loss)\n- **Frequency**: Happens in multi-agent workflows when agents don't sync\n- **Workaround**: Manual recovery (re-export from correct database)\n\n## References\n\n- VC issue tracker: commits 58b4613 -\u003e 0609233 -\u003e c41c638\n- VC has similar check: `storage.ValidateDatabaseFreshness()`\n- Tolerance: 1 second (handles filesystem timestamp precision)","acceptance_criteria":"1. bd export detects stale database (JSONL newer than DB)\n2. Refuses to export with clear error message\n3. Suggests running 'bd import' first\n4. --force flag allows override with warning\n5. Tolerates filesystem timestamp precision (1 second)\n6. Works correctly with WAL mode (.db-wal files)\n7. Test coverage for staleness detection\n8. Documentation updated with export safety warnings","notes":"Fixed with ID-based comparison instead of just count. Now detects:\n1. DB has fewer issues than JSONL (count check)\n2. DB has different issues than JSONL (ID comparison)\n\nBoth scenarios now properly refuse export unless --force is used.\n\nImplementation uses getIssueIDsFromJSONL() to build a set of IDs from JSONL, then checks if any JSONL IDs are missing from DB. Shows specific missing issue IDs in error message.","status":"closed","priority":1,"issue_type":"bug","assignee":"amp","created_at":"2025-11-07T19:39:24.172154-08:00","updated_at":"2025-11-07T20:05:13.649736-08:00","closed_at":"2025-11-07T19:58:43.300177-08:00","source_repo":"."}
 {"id":"bd-tmdx","content_hash":"0976d6529458902f06108d5d316fda3bf6ed299eaa684501aada481d9e4b10a5","title":"Investigate database pollution - unexpected issue count increases","description":"Two repositories showing unexpected issue counts:\n- ~/src/beads: 280 issues (expected ~209-220)\n- ~/src/dave/beads: 895 issues (675 open, 149 closed)\n\nThis suggests database pollution - issues from one repository leaking into another. Need to investigate:\n1. Run bd detect-pollution on both repos\n2. Check for cross-repo contamination\n3. Identify source of pollution (daemon? multi-repo config? import issues?)\n4. Clean up polluted databases\n5. Prevent future pollution","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-06T22:50:16.957689-08:00","updated_at":"2025-11-07T00:05:38.994405-08:00","closed_at":"2025-11-07T00:05:38.994405-08:00","source_repo":"."}
 {"id":"bd-tuqd","content_hash":"2543d4664e5f80948c52a551d867948d9268c333e119b8ec2829f2b3464db2ad","title":"bd init overwrites existing git hooks without detection or chaining","description":"GH #254: bd init silently overwrites existing git hooks (like pre-commit framework) without detecting them, backing them up, or offering to chain. This breaks workflows and can result in committed code with failing tests.\n\nFix: Detect existing hooks, prompt user with options to chain/overwrite/skip.","status":"closed","priority":0,"issue_type":"bug","created_at":"2025-11-07T15:51:17.582882-08:00","updated_at":"2025-11-07T15:55:01.330531-08:00","closed_at":"2025-11-07T15:55:01.330531-08:00","source_repo":"."}

cmd/bd/delete_test.go

@@ -1,9 +1,17 @@
 package main
 
 import (
+	"bufio"
+	"bytes"
+	"context"
+	"encoding/json"
 	"os"
+	"os/exec"
 	"path/filepath"
 	"testing"
+
+	"github.com/steveyegge/beads/internal/storage/sqlite"
+	"github.com/steveyegge/beads/internal/types"
 )
 
 func TestReadIssueIDsFromFile(t *testing.T) {
@@ -97,3 +105,167 @@ func TestUniqueStrings(t *testing.T) {
 		}
 	})
 }
+
+func TestBulkDeleteNoResurrection(t *testing.T) {
+	if testing.Short() {
+		t.Skip("skipping integration test in short mode")
+	}
+
+	tmpDir := t.TempDir()
+	beadsDir := filepath.Join(tmpDir, ".beads")
+	testDB := filepath.Join(beadsDir, "beads.db")
+	jsonlPath := filepath.Join(beadsDir, "issues.jsonl")
+
+	testGitInit(t, tmpDir)
+
+	s := newTestStore(t, testDB)
+	ctx := context.Background()
+
+	totalIssues := 20
+	toDeleteCount := 10
+	var toDelete []string
+
+	for i := 1; i <= totalIssues; i++ {
+		issue := &types.Issue{
+			Title:       "Issue " + string(rune('A'+i-1)),
+			Description: "Test issue",
+			Status:      types.StatusOpen,
+			Priority:    2,
+			IssueType:   "task",
+		}
+		if err := s.CreateIssue(ctx, issue, "test"); err != nil {
+			t.Fatalf("Failed to create issue %d: %v", i, err)
+		}
+		if i <= toDeleteCount {
+			toDelete = append(toDelete, issue.ID)
+		}
+	}
+
+	exportToJSONLTest(t, s, jsonlPath)
+	testGitCommit(t, tmpDir, jsonlPath, "Add issues")
+
+	oldStore := store
+	oldDbPath := dbPath
+	oldAutoImportEnabled := autoImportEnabled
+	defer func() {
+		store = oldStore
+		dbPath = oldDbPath
+		autoImportEnabled = oldAutoImportEnabled
+	}()
+
+	store = s
+	dbPath = testDB
+	autoImportEnabled = true
+
+	result, err := s.DeleteIssues(ctx, toDelete, false, true, false)
+	if err != nil {
+		t.Fatalf("DeleteIssues failed: %v", err)
+	}
+
+	if result.DeletedCount != toDeleteCount {
+		t.Errorf("Expected %d deletions, got %d", toDeleteCount, result.DeletedCount)
+	}
+
+	for _, id := range toDelete {
+		if err := removeIssueFromJSONL(id); err != nil {
+			t.Fatalf("removeIssueFromJSONL failed for %s: %v", id, err)
+		}
+	}
+
+	stats, err := s.GetStatistics(ctx)
+	if err != nil {
+		t.Fatalf("GetStatistics failed: %v", err)
+	}
+
+	expectedRemaining := totalIssues - toDeleteCount
+	if stats.TotalIssues != expectedRemaining {
+		t.Errorf("After delete: expected %d issues in DB, got %d", expectedRemaining, stats.TotalIssues)
+	}
+
+	jsonlIssues := countJSONLIssuesTest(t, jsonlPath)
+	if jsonlIssues != expectedRemaining {
+		t.Errorf("After delete: expected %d issues in JSONL, got %d", expectedRemaining, jsonlIssues)
+	}
+
+	for _, id := range toDelete {
+		issue, err := s.GetIssue(ctx, id)
+		if err != nil {
+			t.Fatalf("GetIssue failed for %s: %v", id, err)
+		}
+		if issue != nil {
+			t.Errorf("Deleted issue %s was resurrected!", id)
+		}
+	}
+}
+
+func exportToJSONLTest(t *testing.T, s *sqlite.SQLiteStorage, jsonlPath string) {
+	t.Helper()
+	ctx := context.Background()
+	issues, err := s.SearchIssues(ctx, "", types.IssueFilter{})
+	if err != nil {
+		t.Fatalf("SearchIssues failed: %v", err)
+	}
+
+	if err := os.MkdirAll(filepath.Dir(jsonlPath), 0755); err != nil {
+		t.Fatalf("Failed to create JSONL dir: %v", err)
+	}
+
+	f, err := os.Create(jsonlPath)
+	if err != nil {
+		t.Fatalf("Failed to create JSONL: %v", err)
+	}
+	defer f.Close()
+
+	enc := json.NewEncoder(f)
+	for _, iss := range issues {
+		if err := enc.Encode(iss); err != nil {
+			t.Fatalf("Failed to encode issue: %v", err)
+		}
+	}
+}
+
+func testGitInit(t *testing.T, dir string) {
+	t.Helper()
+	testGitCmd(t, dir, "init")
+	testGitCmd(t, dir, "config", "user.email", "test@example.com")
+	testGitCmd(t, dir, "config", "user.name", "Test User")
+}
+
+func testGitCommit(t *testing.T, dir, file, msg string) {
+	t.Helper()
+	testGitCmd(t, dir, "add", file)
+	testGitCmd(t, dir, "commit", "-m", msg)
+}
+
+func testGitCmd(t *testing.T, dir string, args ...string) {
+	t.Helper()
+	cmd := exec.Command("git", args...)
+	cmd.Dir = dir
+	if output, err := cmd.CombinedOutput(); err != nil {
+		t.Fatalf("git %v failed: %v\nOutput: %s", args, err, output)
+	}
+}
+
+func countJSONLIssuesTest(t *testing.T, jsonlPath string) int {
+	t.Helper()
+	data, err := os.ReadFile(jsonlPath)
+	if err != nil {
+		if os.IsNotExist(err) {
+			return 0
+		}
+		t.Fatalf("Failed to read JSONL: %v", err)
+	}
+
+	count := 0
+	scanner := bufio.NewScanner(bytes.NewReader(data))
+	for scanner.Scan() {
+		line := scanner.Text()
+		if len(bytes.TrimSpace([]byte(line))) > 0 {
+			count++
+		}
+	}
+	if err := scanner.Err(); err != nil {
+		t.Fatalf("Scanner error: %v", err)
+	}
+	return count
+}

cmd/bd/main.go

@@ -415,8 +415,9 @@ var rootCmd = &cobra.Command{
 
 		// Auto-import if JSONL is newer than DB (e.g., after git pull)
 		// Skip for import command itself to avoid recursion
+		// Skip for delete command to prevent resurrection of deleted issues (bd-8kde)
 		// Skip if sync --dry-run to avoid modifying DB in dry-run mode (bd-191)
-		if cmd.Name() != "import" && autoImportEnabled {
+		if cmd.Name() != "import" && cmd.Name() != "delete" && autoImportEnabled {
 			// Check if this is sync command with --dry-run flag
 			if cmd.Name() == "sync" {
 				if dryRun, _ := cmd.Flags().GetBool("dry-run"); dryRun {