Add stale_closed_issues_days config option to metadata.json:
- 0 (default): Check disabled - repos keep unlimited beads
- >0: Enable check with specified day threshold
Design philosophy: Time-based cleanup is a crude proxy for the real
concern (database size). Disabled by default since a repo with 100
closed issues from 5 years ago doesn't need cleanup.
Also adds a warning when check is disabled but database has >10,000
closed issues, recommending users enable the threshold.
Co-Authored-By: SageOx <ox@sageox.ai>
Executed-By: beads/crew/emma
Rig: beads
Role: crew
Add CheckPatrolPollution to detect stale patrol beads:
- Patrol digests matching 'Digest: mol-*-patrol'
- Session ended beads matching 'Session ended: *'
Includes auto-fix via 'bd doctor --fix' to clean up pollution.
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Add _ = prefix for ignored Close/Remove return values
- Fix unused cmd parameter in runMoleculeReady
- Add nolint:misspell for intentional British "cancelled" spelling
- Update comments to use US spelling where not intentional
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add new Maintenance category to bd doctor with checks for:
- Stale closed issues (older than 30 days)
- Expired tombstones (older than TTL)
- Compaction candidates (info only)
Add fix handlers for cleanup and tombstone pruning via bd doctor --fix.
Add deprecation hints to cleanup, compact, and detect-pollution commands
suggesting users try bd doctor instead.
This consolidation reduces cognitive load - users just need to remember
'bd doctor' for health checks and 'bd doctor --fix' for maintenance.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
