Dirceu Pereira Tiegs 939ade731f fix: doctor check skips interactions.jsonl and molecules.jsonl (GH#709) (#739) ...

The fix for GH#709 updated FindJSONLInDir to skip interactions.jsonl,
but the doctor check in CheckLegacyJSONLFilename was not updated.
This caused `bd doctor` to warn about multiple JSONL files when
both issues.jsonl and interactions.jsonl exist (which is normal
after `bd init`).

Also skip molecules.jsonl which is another system file that shouldn't
be counted as a duplicate issue database.

2025-12-25 11:52:43 -08:00

..

doctor

fix: doctor check skips interactions.jsonl and molecules.jsonl (GH#709) (#739)

2025-12-25 11:52:43 -08:00

setup

Add tests for setup package (28.4% → 53.8% coverage)

2025-12-23 22:40:16 -08:00

templates/hooks

release: v0.36.0

2025-12-24 15:57:22 -08:00

testdata

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

.gitattributes

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@AGENTS.md

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activity_test.go

fix: emit rich mutation events for status changes (bd-313v)

2025-12-23 04:16:26 -08:00

activity.go

fix: emit rich mutation events for status changes (bd-313v)

2025-12-23 04:16:26 -08:00

AGENTS.md

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audit.go

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autoflush.go

fix(json): audit and standardize JSON output across commands (bd-au0.7)

2025-12-24 00:10:14 -08:00

autoimport_test.go

refactor: consolidate duplicate path-finding utilities (bd-74w1, bd-4nqq)

2025-12-22 21:15:41 -08:00

autoimport.go

Refactor duplicate JSONL-from-git parsing code (bd-y2v)

2025-12-23 22:41:05 -08:00

autostart_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

cleanup.go

feat: consolidate maintenance commands into bd doctor --fix (bd-bqcc)

2025-12-23 01:31:18 -08:00

cli_fast_test.go

refactor: remove legacy autoflush code paths (bd-xsl9)

2025-12-23 01:56:19 -08:00

comments_test.go

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comments.go

fix(json): standardize JSON output for errors and empty arrays (bd-au0.7)

2025-12-24 00:07:52 -08:00

compact_test.go

feat(compact): Add --prune mode for standalone tombstone pruning (bd-c7y5)

2025-12-24 00:08:10 -08:00

compact.go

feat(compact): Add --prune mode for standalone tombstone pruning (bd-c7y5)

2025-12-24 00:08:10 -08:00

config_test.go

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config.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

cook.go

Implement expansion operators for formula composition (gt-8tmz.3)

2025-12-25 02:11:03 -08:00

count.go

feat: add gate issue type and CLI commands for async coordination (bd-udsi)

2025-12-23 12:06:42 -08:00

create_form_test.go

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create_form.go

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create_test.go

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create.go

wip: simplify wisp architecture - single db with Wisp flag (bd-bkul)

2025-12-24 20:31:27 -08:00

daemon_autoimport_test.go

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daemon_autostart.go

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

daemon_basics_test.go

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daemon_config.go

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daemon_crash_test.go

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daemon_debouncer_test.go

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daemon_debouncer.go

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daemon_event_loop.go

feat(daemon): add auto_pull config parameter for periodic remote sync

2025-12-22 18:47:18 -05:00

daemon_health_freebsd.go

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daemon_health_unix.go

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daemon_health_wasm.go

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daemon_health_windows.go

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daemon_integration_test.go

bd sync: 2025-12-23 23:38:57

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daemon_lifecycle.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemon_local_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemon_lock_test.go

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daemon_lock_unix.go

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daemon_lock_wasm.go

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daemon_lock_windows.go

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daemon_lock.go

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

daemon_logger.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemon_parent_test.go

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daemon_rotation_test.go

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daemon_server.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemon_sync_branch_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemon_sync_branch.go

fix(sync): respect sync.remote config in daemon sync operations (#736)

2025-12-24 12:43:18 -08:00

daemon_sync_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemon_sync.go

refactor(cmd): migrate sort.Slice to slices.SortFunc (bd-u2sc.2)

2025-12-22 15:39:55 -08:00

daemon_test.go

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daemon_unix_test.go

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daemon_unix.go

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daemon_wasm.go

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daemon_watcher_platform_test.go

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daemon_watcher_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemon_watcher.go

fix(daemon): deduplicate file and git ref change log messages

2025-12-22 19:02:42 -05:00

daemon_windows.go

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daemon.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

daemons_test.go

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daemons.go

refactor(cmd): replace map[string]interface{} with typed JSON response structs (bd-u2sc.1)

2025-12-22 15:48:36 -08:00

defer.go

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delete_rpc_test.go

test(delete): Add comprehensive tests for deleteViaDaemon RPC client (bd-dtl8)

2025-12-24 00:07:55 -08:00

delete_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

delete.go

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deletion_tracking_test.go

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deletion_tracking.go

chore: remove dead deprecated wrapper functions

2025-12-21 15:50:10 -08:00

dep_test.go

feat(deps): detect/prevent child→parent dependency anti-pattern (bd-nim5)

2025-12-24 13:03:27 -08:00

dep.go

feat(deps): detect/prevent child→parent dependency anti-pattern (bd-nim5)

2025-12-24 13:03:27 -08:00

detect_pollution.go

feat: consolidate maintenance commands into bd doctor --fix (bd-bqcc)

2025-12-23 01:31:18 -08:00

direct_mode_test.go

refactor: remove legacy autoflush code paths (bd-xsl9)

2025-12-23 01:56:19 -08:00

direct_mode.go

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docs.md

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doctor_test.go

release: v0.34.0

2025-12-22 03:18:55 -08:00

doctor.go

feat(deps): detect/prevent child→parent dependency anti-pattern (bd-nim5)

2025-12-24 13:03:27 -08:00

duplicate.go

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

duplicates_test.go

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duplicates.go

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epic_test.go

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epic.go

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errors.go

fix(json): standardize JSON output for errors and empty arrays (bd-au0.7)

2025-12-24 00:07:52 -08:00

export_import_test.go

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export_integrity_integration_test.go

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export_mtime_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

export_staleness_test.go

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export_test.go

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export.go

feat(export): add --priority exact match filter (bd-au0.6)

2025-12-24 00:06:51 -08:00

external_ref_test.go

feat: add cross-project dependency support - config and external: prefix (bd-66w1, bd-om4a)

2025-12-21 23:08:00 -08:00

flags.go

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flush_manager_test.go

refactor: remove legacy autoflush code paths (bd-xsl9)

2025-12-23 01:56:19 -08:00

flush_manager.go

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fork_protection_test.go

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fork_protection.go

refactor: consolidate duplicate path-finding utilities (bd-74w1, bd-4nqq)

2025-12-22 21:15:41 -08:00

gate.go

Remove hardcoded deacon assignee from gate.go

2025-12-25 01:14:53 -08:00

git_sync_test.go

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graph_test.go

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graph.go

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helpers_test.go

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hook.go

feat: implement molecular chemistry UX commands

2025-12-22 02:21:40 -08:00

hooks_test.go

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hooks.go

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import_bug_test.go

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import_cancellation_test.go

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import_idempotent_test.go

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import_mtime_test.go

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import_multipart_id_test.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

import_profile_test.go

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import_shared.go

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import_uncommitted_test.go

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import.go

refactor: remove legacy autoflush code paths (bd-xsl9)

2025-12-23 01:56:19 -08:00

info_test.go

refactor: consolidate duplicate path-finding utilities (bd-74w1, bd-4nqq)

2025-12-22 21:15:41 -08:00

info.go

refactor: Simplify wisp architecture - badges not separate storage

2025-12-25 01:49:57 -08:00

init_contributor.go

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init_hooks_test.go

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init_team.go

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init_test.go

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init.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

integrity_content_test.go

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integrity_test.go

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integrity.go

refactor(cmd): migrate sort.Slice to slices.SortFunc (bd-u2sc.2)

2025-12-22 15:39:55 -08:00

jira_test.go

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jira.go

refactor: consolidate duplicate path-finding utilities (bd-74w1, bd-4nqq)

2025-12-22 21:15:41 -08:00

jsonl_integrity_test.go

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label_test.go

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label.go

feat: add bd ship command for cross-project capabilities (bd-eijl)

2025-12-21 23:11:48 -08:00

linear_test.go

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linear.go

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list_test.go

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list.go

feat(list): add --pretty and --watch flags for built-in viewer (#729)

2025-12-24 12:35:57 -08:00

mail.go

fix(lint): add nosec for mail delegate exec.Command

2025-12-21 15:29:58 -08:00

main_test.go

refactor: remove legacy autoflush code paths (bd-xsl9)

2025-12-23 01:56:19 -08:00

main.go

feat(config): add override notification for config parameters (#731)

2025-12-24 12:35:54 -08:00

markdown_test.go

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markdown.go

fix: bd create -f now works with daemon mode (GH#719)

2025-12-22 23:30:08 -08:00

merge_security_test.go

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merge.go

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migrate_hash_ids_test.go

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migrate_hash_ids.go

refactor(cmd): migrate sort.Slice to slices.SortFunc (bd-u2sc.2)

2025-12-22 15:39:55 -08:00

migrate_issues.go

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

migrate_sync_test.go

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migrate_sync.go

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migrate_test.go

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migrate_tombstones.go

refactor: consolidate duplicate path-finding utilities (bd-74w1, bd-4nqq)

2025-12-22 21:15:41 -08:00

migrate.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

mol_bond.go

refactor: simplify wisp architecture - single DB with Wisp flag (bd-bkul)

2025-12-24 20:42:54 -08:00

mol_burn.go

refactor: simplify wisp architecture - single DB with Wisp flag (bd-bkul)

2025-12-24 20:42:54 -08:00

mol_catalog.go

refactor(mol): remove bd mol spawn - use pour/wisp only (bd-8y9t)

2025-12-24 12:52:47 -08:00

mol_current.go

Remove bd mol run - orchestration belongs in gt

2025-12-25 01:05:16 -08:00

mol_distill.go

feat: Add proto prefix for distilled molecules (bd-hobo)

2025-12-25 02:11:52 -08:00

mol_show.go

feat: add parallel step detection for molecules (bd-xo1o.4)

2025-12-23 03:57:08 -08:00

mol_squash.go

refactor: simplify wisp architecture - single DB with Wisp flag (bd-bkul)

2025-12-24 20:42:54 -08:00

mol_test.go

feat: Distinct prefixes for protos, molecules, wisps (bd-hobo)

2025-12-25 02:05:25 -08:00

mol.go

feat: Distinct prefixes for protos, molecules, wisps (bd-hobo)

2025-12-25 02:05:25 -08:00

nodb_test.go

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nodb.go

fix: filter wisps from nodb writeIssuesToJSONL (bd-9avq)

2025-12-24 21:19:00 -08:00

onboard_test.go

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onboard.go

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output_test.go

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periodic_remote_sync_test.go

feat(daemon): add auto_pull config parameter for periodic remote sync

2025-12-22 18:47:18 -05:00

pin.go

feat: implement molecular chemistry UX commands

2025-12-22 02:21:40 -08:00

pour.go

feat: Distinct prefixes for protos, molecules, wisps (bd-hobo)

2025-12-25 02:05:25 -08:00

prime_test.go

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prime.go

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quick.go

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quickstart.go

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readonly_test.go

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ready_test.go

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ready.go

fix: resolve golangci-lint errors

2025-12-23 05:10:38 -08:00

reinit_test.go

fix: make database_removal_scenario test more realistic

2025-12-23 00:04:55 -08:00

relate_test.go

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relate.go

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rename_prefix_repair_test.go

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rename_prefix_test.go

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rename_prefix.go

refactor(doctor): consolidate maintenance commands + improve daemon startup

2025-12-22 20:21:30 -08:00

reopen_test.go

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reopen.go

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repair_deps_test.go

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repo.go

fix: bd repo commands write to YAML and cleanup on remove (#683)

2025-12-22 01:26:45 -08:00

reset_test.go

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reset.go

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

restore_test.go

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restore.go

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sandbox_test.go

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sandbox_unix.go

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sandbox_windows.go

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scripttest_test.go

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search_test.go

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search.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

setup.go

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ship.go

feat: add bd ship command for cross-project capabilities (bd-eijl)

2025-12-21 23:11:48 -08:00

show.go

fix(json): standardize JSON output for errors and empty arrays (bd-au0.7)

2025-12-24 00:07:52 -08:00

simple_helpers_test.go

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snapshot_manager.go

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

stale_test.go

fix(json): audit and standardize JSON output across commands (bd-au0.7)

2025-12-24 00:10:14 -08:00

stale.go

fix(json): audit and standardize JSON output across commands (bd-au0.7)

2025-12-24 00:10:14 -08:00

staleness.go

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status_test.go

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status.go

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sync_branch_priority_test.go

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sync_branch.go

fix: address CI lint errors (gosec, errcheck, unparam, duplicate tests) (#730)

2025-12-24 12:35:32 -08:00

sync_check.go

fix: address CI lint errors (gosec, errcheck, unparam, duplicate tests) (#730)

2025-12-24 12:35:32 -08:00

sync_export.go

fix: filter wisps from sync_export.go (bd-687g)

2025-12-24 20:55:31 -08:00

sync_import.go

fix: address CI lint errors (gosec, errcheck, unparam, duplicate tests) (#730)

2025-12-24 12:35:32 -08:00

sync_local_only_test.go

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sync_merge_test.go

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sync_test.go

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sync.go

bd sync: 2025-12-23 23:38:57

2025-12-24 00:06:41 -08:00

template_test.go

fix: mol run loads all hierarchical children + supports title lookup (bd-c8d5, bd-drcx)

2025-12-24 23:33:34 -08:00

template.go

feat: Distinct prefixes for protos, molecules, wisps (bd-hobo)

2025-12-25 02:05:25 -08:00

test_helpers_test.go

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test_wait_helper.go

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thanks.go

refactor(cmd): migrate sort.Slice to slices.SortFunc (bd-u2sc.2)

2025-12-22 15:39:55 -08:00

thread_test.go

refactor: rename Ephemeral → Wisp (Steam Engine metaphor)

2025-12-21 15:22:45 -08:00

tips_example_test.go

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tips_test.go

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tips.go

chore: code health review - test fix and error comments (bd-9g1z, bd-ork0)

2025-12-22 21:30:57 -08:00

undefer.go

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unpin.go

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upgrade.go

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version_test.go

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version_tracking_test.go

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version_tracking.go

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version.go

release: v0.36.0

2025-12-24 15:57:22 -08:00

wisp.go

feat: Distinct prefixes for protos, molecules, wisps (bd-hobo)

2025-12-25 02:05:25 -08:00

worktree_daemon_test.go

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worktree_test.go

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worktree.go

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