These commands modify issues in bulk but weren't triggering auto-export to JSONL. This caused database and JSONL to get out of sync. Added markDirtyAndScheduleFlush() calls to: - bd renumber (after renumbering completes) - bd rename-prefix (after prefix rename completes) - bd compact (after single/batch compaction) - bd delete (already had it) Fixes the issue where massive cleanups weren't exported to JSONL. Amp-Thread-ID: https://ampcode.com/threads/T-a43dc9fa-e9bc-43c7-9055-33acc08bc642 Co-authored-by: Amp <amp@ampcode.com>
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