Roland Tritsch 6bfe61f796 Fix daemon shutdown detection bug ...

## Problem
gt shutdown failed to stop orphaned daemon processes because the
detection mechanism ignored errors and had no fallback.

## Root Cause
stopDaemonIfRunning() ignored errors from daemon.IsRunning(), causing:
1. Stale PID files to hide running daemons
2. Corrupted PID files to return silent false
3. No fallback detection for orphaned processes
4. Early return when no sessions running prevented daemon check

## Solution
1. Enhanced IsRunning() to return detailed errors
2. Added process name verification (prevents PID reuse false positives)
3. Added fallback orphan detection using pgrep
4. Fixed stopDaemonIfRunning() to handle errors and use fallback
5. Added daemon check even when no sessions are running

## Testing
Verified shutdown now:
- Detects and reports stale/corrupted PID files
- Finds orphaned daemon processes
- Kills all daemon processes reliably
- Reports detailed status during shutdown
- Works even when no other sessions are running

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

2026-01-20 20:25:25 -08:00

..

account_test.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

account.go

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activity.go

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agent_state_test.go

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agent_state.go

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agents.go

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audit_test.go

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audit.go

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bead.go

feat(bead): add 'gt bead show' subcommand

2026-01-16 15:56:29 -08:00

beads_db_init_test.go

fix(beads): init db for tracked beads after clone (#376)

2026-01-11 23:03:47 -08:00

beads_routing_integration_test.go

fix(beads): prevent routes.jsonl corruption and add doctor check for rig-level routes.jsonl (#377)

2026-01-12 01:45:26 -08:00

beads_version_test.go

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beads_version.go

fix(hook): handle error from events.LogFeed (#440)

2026-01-13 13:40:57 -08:00

boot_test.go

feat(refinery,boot): add --agent flag for model selection (#469)

2026-01-13 13:14:47 -08:00

boot.go

feat(refinery,boot): add --agent flag for model selection (#469)

2026-01-13 13:14:47 -08:00

broadcast.go

fix(broadcast): exclude sender from recipients

2026-01-17 03:19:08 -08:00

callbacks.go

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cat.go

feat(cmd): add 'gt cat' command to display bead content

2026-01-15 17:44:40 -08:00

checkpoint_cmd.go

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close.go

feat(cmd): add desire-path commands for agent ergonomics

2026-01-16 15:28:55 -08:00

commit_test.go

feat(identity): add gt commit wrapper and gt trail command

2026-01-13 19:34:29 -08:00

commit.go

feat(identity): add gt commit wrapper and gt trail command

2026-01-13 19:34:29 -08:00

config_test.go

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config.go

feat(identity): add gt commit wrapper and gt trail command

2026-01-13 19:34:29 -08:00

convoy.go

fix(convoy): capture stderr for 'couldn't track issue' warnings

2026-01-17 00:37:57 -08:00

costs_test.go

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costs_workdir_test.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

costs.go

fix(costs): disable cost tracking until Claude Code exposes cost data

2026-01-17 02:49:17 -08:00

crew_add.go

feat(roles): switch daemon to config-based roles, remove role beads (Phase 2+3)

2026-01-20 12:58:01 -08:00

crew_at.go

refactor(config): remove BEADS_DIR from agent environment and add doctor check (#455)

2026-01-13 22:13:57 -08:00

crew_cycle.go

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crew_helpers.go

fix(tmux): use switch-client when already inside tmux session

2026-01-16 15:27:59 -08:00

crew_lifecycle.go

fix(orphan): prevent Claude Code session leaks on macOS

2026-01-17 03:49:18 -08:00

crew_list_test.go

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crew_list.go

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crew_maintenance.go

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crew_status.go

feat(crew): accept rig name as positional arg in crew status

2026-01-12 23:07:49 -08:00

crew.go

docs: improve help text and add nudge documentation

2026-01-17 02:55:39 -08:00

cycle.go

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daemon.go

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dashboard_test.go

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dashboard.go

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deacon.go

feat(deacon): add zombie-scan command for tmux-verified process cleanup

2026-01-20 14:19:29 -08:00

disable.go

feat: Set and Forget - Seamless Gas Town Integration (#255)

2026-01-08 20:25:01 -08:00

dnd_test.go

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dnd.go

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doctor.go

feat(wisp): add misclassified wisp detection and defense-in-depth filtering (#833)

2026-01-20 20:20:49 -08:00

dog.go

docs: improve help text and add nudge documentation

2026-01-17 02:55:39 -08:00

done_test.go

fix(done): restrict gt done to polecats only

2026-01-20 19:51:37 -08:00

done.go

fix(done): restrict gt done to polecats only

2026-01-20 19:51:37 -08:00

down_test.go

Feat/gt down tests (#15) (#18) (#330)

2026-01-10 22:56:33 -08:00

down.go

fix(down): prevent tmux server exit when all sessions killed

2026-01-17 01:34:38 -08:00

enable.go

feat: Set and Forget - Seamless Gas Town Integration (#255)

2026-01-08 20:25:01 -08:00

errors_test.go

fix(errors): use errors.As for wrapped error handling (#462)

2026-01-16 11:05:59 -08:00

errors.go

fix(errors): use errors.As for wrapped error handling (#462)

2026-01-16 11:05:59 -08:00

escalate_impl.go

fix(config): don't export empty GT_ROOT/BEADS_DIR in AgentEnv (#385)

2026-01-12 02:45:03 -08:00

escalate.go

feat(escalate): align config schema with design doc

2026-01-12 02:31:06 -08:00

feed.go

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formula.go

fix(beads): align agent bead prefixes and force multi-hyphen IDs (#482)

2026-01-16 12:33:51 -08:00

gate.go

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gitinit.go

Create initial commit before gh repo create --push

2026-01-20 14:15:31 -08:00

handoff.go

fix(handoff): preserve GT_AGENT across session restarts (#788)

2026-01-20 14:17:52 -08:00

help.go

feat(ui): import comprehensive UX system from beads

2026-01-09 22:46:06 -08:00

hook_slot_integration_test.go

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hook.go

feat(cmd): add desire-path commands for agent ergonomics

2026-01-16 15:28:55 -08:00

hooks_test.go

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hooks.go

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info.go

chore: Bump version to 0.4.0

2026-01-17 12:46:49 -08:00

init.go

feat(doctor): add custom types check and centralize BeadsCustomTypes

2026-01-09 13:30:11 -08:00

install_integration_test.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

install.go

feat(roles): switch daemon to config-based roles, remove role beads (Phase 2+3)

2026-01-20 12:58:01 -08:00

issue.go

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log.go

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mail_announce.go

refactor(beads,mail): split large files into focused modules

2026-01-09 23:01:55 -08:00

mail_channel.go

fix(mail): improve channel subscribe/unsubscribe feedback

2026-01-17 09:49:53 -08:00

mail_check.go

refactor(beads,mail): split large files into focused modules

2026-01-09 23:01:55 -08:00

mail_group_test.go

feat(mail): add group management commands

2026-01-14 21:18:20 -08:00

mail_group.go

feat(mail): add group management commands

2026-01-14 21:18:20 -08:00

mail_identity.go

refactor(beads,mail): split large files into focused modules

2026-01-09 23:01:55 -08:00

mail_inbox.go

fix(mail): refactor duplicated inbox logic and fix clear race condition (#435)

2026-01-13 13:45:25 -08:00

mail_queue.go

feat(mail): add queue management commands

2026-01-14 21:29:37 -08:00

mail_search.go

refactor(beads,mail): split large files into focused modules

2026-01-09 23:01:55 -08:00

mail_send.go

feat(mail): update mail send to use address resolver

2026-01-14 21:19:54 -08:00

mail_test.go

feat(mail): implement beads-native gt mail claim command

2026-01-14 21:25:11 -08:00

mail_thread.go

refactor(beads,mail): split large files into focused modules

2026-01-09 23:01:55 -08:00

mail.go

feat(mail): add 'ack' alias for mark-read command

2026-01-17 01:33:29 -08:00

mayor.go

docs: improve help text and add nudge documentation

2026-01-17 02:55:39 -08:00

molecule_attach_from_mail_test.go

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molecule_attach_from_mail.go

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molecule_attach.go

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molecule_await_signal_test.go

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molecule_await_signal.go

fix(await-signal): update agent last_activity on signal received (#774)

2026-01-20 14:10:26 -08:00

molecule_lifecycle.go

feat(patrol): add daily patrol digest aggregation

2026-01-17 02:11:12 -08:00

molecule_status.go

fix(hook): warn when hooked bead is already closed

2026-01-09 22:10:09 -08:00

molecule_step_test.go

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molecule_step.go

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molecule.go

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mq_integration.go

feat(mq): add configurable integration branch naming (#104)

2026-01-09 00:41:35 -08:00

mq_list.go

fix(mq): use label instead of issue_type for merge-request filtering (#831)

2026-01-20 19:31:26 -08:00

mq_next.go

fix(mq): skip closed MRs in list, next, and ready views (#563)

2026-01-16 15:23:28 -08:00

mq_status.go

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mq_submit.go

fix(resume): capture error in handoff message fallback (#583)

2026-01-16 15:27:38 -08:00

mq_test.go

fix(mq): use label instead of issue_type for merge-request filtering (#831)

2026-01-20 19:31:26 -08:00

mq_testutil_test.go

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mq.go

feat(mq): add configurable integration branch naming (#104)

2026-01-09 00:41:35 -08:00

namepool.go

fix(namepool): only persist runtime state, not config in state file

2026-01-17 01:40:02 -08:00

notify.go

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nudge_test.go

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nudge.go

docs: improve help text and add nudge documentation

2026-01-17 02:55:39 -08:00

orphans.go

feat(orphans): make kill command handle both commits and processes

2026-01-16 15:44:07 -08:00

park.go

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patrol_helpers.go

fix(patrol): use gt formula list instead of bd mol catalog (#827)

2026-01-20 19:31:17 -08:00

patrol_test.go

test(patrol): add unit tests for patrol.go

2026-01-17 03:47:18 -08:00

patrol.go

fix(patrol): add idempotency check for digest command

2026-01-17 03:41:18 -08:00

peek.go

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plugin.go

feat(plugin): add run and history commands for plugin management

2026-01-12 16:42:33 -08:00

polecat_cycle_test.go

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polecat_cycle.go

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polecat_dotdir_test.go

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polecat_helpers.go

fix(beads): align agent bead prefixes and force multi-hyphen IDs (#482)

2026-01-16 12:33:51 -08:00

polecat_identity.go

fix(beads): align agent bead prefixes and force multi-hyphen IDs (#482)

2026-01-16 12:33:51 -08:00

polecat_spawn.go

fix(polecat): kill orphan sessions and clear stale hooks during allocation (#448)

2026-01-13 13:37:00 -08:00

polecat.go

docs: improve help text and add nudge documentation

2026-01-17 02:55:39 -08:00

prime_molecule.go

fix: handle bd --no-daemon exit code 0 bug on not-found (#339)

2026-01-11 18:37:01 -08:00

prime_output.go

feat(crew): accept rig name as positional arg in crew status

2026-01-12 23:07:49 -08:00

prime_session.go

refactor(prime): split 1833-line file into logical modules

2026-01-10 18:28:14 -08:00

prime_state.go

refactor(prime): split 1833-line file into logical modules

2026-01-10 18:28:14 -08:00

prime_test.go

fix(dog): exclude non-dog entries from kennel listing

2026-01-17 09:46:25 -08:00

prime.go

feat(crew): accept rig name as positional arg in crew status

2026-01-12 23:07:49 -08:00

process_unix.go

fix: Windows build support with platform-specific process/signal handling

2026-01-13 20:59:15 -08:00

process_windows.go

fix: Windows build support with platform-specific process/signal handling

2026-01-13 20:59:15 -08:00

ready_test.go

fix(ready): filter formula scaffolds from gt ready output (gt-579)

2026-01-16 15:38:08 -08:00

ready.go

feat(wisp): add misclassified wisp detection and defense-in-depth filtering (#833)

2026-01-20 20:20:49 -08:00

refinery_test.go

feat(refinery,boot): add --agent flag for model selection (#469)

2026-01-13 13:14:47 -08:00

refinery.go

refactor(witness,refinery): ZFC-compliant state management

2026-01-20 20:00:56 -08:00

release.go

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resume.go

fix(resume): capture error in handoff message fallback (#583)

2026-01-16 15:27:38 -08:00

rig_config.go

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rig_detect.go

feat: Set and Forget - Seamless Gas Town Integration (#255)

2026-01-08 20:25:01 -08:00

rig_dock.go

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rig_helpers.go

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rig_integration_test.go

test(rig): add tests for agent bead creation during rig add (#578)

2026-01-16 15:23:35 -08:00

rig_park.go

feat(rig): support parking multiple rigs in single call

2026-01-12 17:44:37 -08:00

rig_quick_add.go

feat: Set and Forget - Seamless Gas Town Integration (#255)

2026-01-08 20:25:01 -08:00

rig.go

fix(witness,rig): code review cleanup

2026-01-20 20:19:05 -08:00

role_e2e_test.go

feat: add RoleEnvVars and improve gt role CLI

2026-01-09 21:52:09 -08:00

role.go

feat(roles): add config-based role definition system (Phase 1)

2026-01-20 12:57:46 -08:00

root.go

fix(lint): resolve errcheck and unparam violations

2026-01-11 18:06:09 -08:00

routes_jsonl_corruption_test.go

fix(beads): prevent routes.jsonl corruption and add doctor check for rig-level routes.jsonl (#377)

2026-01-12 01:45:26 -08:00

seance.go

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session.go

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shell.go

feat: Set and Forget - Seamless Gas Town Integration (#255)

2026-01-08 20:25:01 -08:00

show.go

feat(cli): add 'gt show' command for inspecting beads

2026-01-15 19:19:13 -08:00

sling_batch.go

fix(sling): auto-attach work molecule and handle dead polecats

2026-01-13 14:01:49 +01:00

sling_convoy.go

fix(namepool): persist custom names to settings/config.json

2026-01-17 00:37:38 -08:00

sling_dog.go

refactor(sling): split 1560-line file into 7 focused modules

2026-01-12 03:11:59 -08:00

sling_formula.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

sling_helpers.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

sling_target.go

refactor(sling): split 1560-line file into 7 focused modules

2026-01-12 03:11:59 -08:00

sling_test.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

sling.go

fix(sling): allow auto-attach mol-polecat-work on open polecat beads

2026-01-20 20:02:44 -08:00

stale.go

feat(stale): add gt stale command for binary staleness check

2026-01-12 03:10:58 -08:00

start.go

Fix daemon shutdown detection bug

2026-01-20 20:25:25 -08:00

status_test.go

…

status.go

Fix bd daemon command syntax and flags (#522)

2026-01-17 00:00:50 -08:00

statusline_test.go

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statusline.go

chore: Bump version to 0.4.0

2026-01-17 12:46:49 -08:00

swarm.go

fix(polecat): kill orphan sessions and clear stale hooks during allocation (#448)

2026-01-13 13:37:00 -08:00

synthesis_test.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

synthesis.go

…

tap_guard.go

refactor(hooks): rename to gt tap guard pr-workflow

2026-01-19 11:21:54 -08:00

tap.go

refactor(hooks): rename to gt tap guard pr-workflow

2026-01-19 11:21:54 -08:00

test_helpers_test.go

Fixing unit tests on windows (#813)

2026-01-20 14:17:35 -08:00

thanks.go

feat(ui): import comprehensive UX system from beads

2026-01-09 22:46:06 -08:00

theme.go

…

town_cycle.go

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trail.go

feat(identity): add gt commit wrapper and gt trail command

2026-01-13 19:34:29 -08:00

uninstall.go

feat: Set and Forget - Seamless Gas Town Integration (#255)

2026-01-08 20:25:01 -08:00

unsling.go

fix(sling): remove obsolete --naked flag

2026-01-11 22:23:21 -08:00

up_test.go

perf(up): parallelize all agent startup with concurrency limit (#476)

2026-01-13 13:46:50 -08:00

up.go

fix(rig): respect parked/docked status in gt up and gt rig start

2026-01-17 00:50:46 -08:00

version.go

chore: Bump version to 0.4.0

2026-01-17 12:46:49 -08:00

whoami.go

…

witness_test.go

feat: add witness start agent override

2026-01-09 21:56:53 -08:00

witness.go

refactor(witness,refinery): ZFC-compliant state management

2026-01-20 20:00:56 -08:00

worktree.go

…